PDB: 98078 resultsInfo pagesStatus searchChemie searchBIRD

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1SWD	APO-CORE-STREPTAVIDIN IN COMPLEX WITH BIOTIN (TWO UNOCCUPIED BINDING SITES) AT PH 4.5 Descriptor: BIOTIN, STREPTAVIDIN Authors: Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. Deposit date: 1997-03-04 Release date: 1998-03-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Structural studies of the streptavidin binding loop. Protein Sci., 6, 1997
1SWB	APO-CORE-STREPTAVIDIN AT PH 7.5 Descriptor: STREPTAVIDIN Authors: Freitag, S, Le Trong, I, Klumb, L, Stayton, P.S, Stenkamp, R.E. Deposit date: 1997-03-04 Release date: 1998-03-04 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Structural studies of the streptavidin binding loop. Protein Sci., 6, 1997
1TV7	Structure of the S-adenosylmethionine dependent Enzyme MoaA Descriptor: IRON/SULFUR CLUSTER, Molybdenum cofactor biosynthesis protein A, SULFATE ION Authors: Haenzelmann, P, Schindelin, H. Deposit date: 2004-06-28 Release date: 2004-08-31 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal structure of the S-adenosylmethionine-dependent enzyme MoaA and its implications for molybdenum cofactor deficiency in humans. Proc.Natl.Acad.Sci.Usa, 101, 2004
4YYO	Resting state of rat cysteine dioxygenase C164S variant Descriptor: CHLORIDE ION, Cysteine dioxygenase type 1, FE (II) ION Authors: Fellner, M, Tchesnokov, E.P, Siakkou, E, Rutledge, M.T, Jameson, G.N.L, Wilbanks, S.M. Deposit date: 2015-03-24 Release date: 2016-06-01 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.77 Å) Cite: Influence of cysteine 164 on active site structure in rat cysteine dioxygenase. J.Biol.Inorg.Chem., 21, 2016
4HJ8	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTACGCT) Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*CP*GP*CP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, Wuttke, D.S. Deposit date: 2012-10-12 Release date: 2012-12-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.043 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
4HID	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GCTTACGGT) Descriptor: DNA (5'-D(*GP*CP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, Wuttke, D.S. Deposit date: 2012-10-11 Release date: 2012-12-12 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.822 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
6ENN	Tryptophan Repressor TrpR from E.coli variant T44L T81M N87G S88Y with Indole-3-acetic acid as ligand Descriptor: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor Authors: Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B. Deposit date: 2017-10-05 Release date: 2019-02-06 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.17 Å) Cite: A biosensor for the direct visualization of auxin Nature, 2021
5GTD	o-Succinylbenzoate CoA Synthetase (MenE) from Bacillus Subtilis in Complex with the Acyl-adenylate Intermediate OSB-AMP Descriptor: 2-SUCCINYLBENZOATE, 2-succinylbenzoate--CoA ligase, ADENOSINE MONOPHOSPHATE, ... Authors: Chen, Y, Guo, Z. Deposit date: 2016-08-20 Release date: 2017-01-04 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.69 Å) Cite: Mechanistic Insights from the Crystal Structure of Bacillus subtilis o-Succinylbenzoyl-CoA Synthetase Complexed with the Adenylate Intermediate Biochemistry, 55, 2016
4HJA	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (ACGGTTACGGT) Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, Wuttke, D.S. Deposit date: 2012-10-12 Release date: 2012-12-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
6ELF	Tryptophan Repressor TrpR from E.coli variant M42F T44L T81I S88Y with Indole-3-acetic acid as ligand Descriptor: 1H-INDOL-3-YLACETIC ACID, Trp operon repressor Authors: Stiel, A.C, Shanmugaratnam, S, Herud-Sikimic, O, Juergens, G, Hocker, B. Deposit date: 2017-09-28 Release date: 2019-02-06 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (1.832 Å) Cite: A biosensor for the direct visualization of auxin Nature, 2021
4HJ7	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTAGGGT) Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, Wuttke, D.S. Deposit date: 2012-10-12 Release date: 2012-12-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.783 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
6PAE	Dickeya chrysanthemi complex with L-Asp at pH 5.6 Descriptor: 1,2-ETHANEDIOL, ASPARTIC ACID, GLYCEROL, ... Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
4Z82	Cysteine bound rat cysteine dioxygenase C164S variant at pH 8.1 Descriptor: CYSTEINE, Cysteine dioxygenase type 1, FE (II) ION Authors: Fellner, M, Tchesnokov, E.P, Siakkou, E, Rutledge, M.T, Kanitz, M, Jameson, G.N.L, Wilbanks, S.M. Deposit date: 2015-04-08 Release date: 2016-06-01 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Influence of cysteine 164 on active site structure in rat cysteine dioxygenase. J.Biol.Inorg.Chem., 21, 2016
6EL7	Glucocorticoid Receptor in complex with compound 31 Descriptor: 1,2-ETHANEDIOL, Glucocorticoid receptor, Nuclear receptor coactivator 2, ... Authors: Edman, K, Wissler, L. Deposit date: 2017-09-28 Release date: 2018-02-21 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.18 Å) Cite: Discovery of a Novel Oral Glucocorticoid Receptor Modulator (AZD9567) with Improved Side Effect Profile. J. Med. Chem., 61, 2018
6CN5	HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA LIGAND- BINDING DOMAIN IN COMPLEX WITH INDOLE LIGAND CP9b IN INVERSE AGONIST CONFORMATION Descriptor: 4-cyano-N-{3-[1-(cyclohexanecarbonyl)piperidin-4-yl]-1-methyl-1H-indol-5-yl}pyridine-2-carboxamide, Nuclear receptor ROR-gamma Authors: Kauppi, B, Vajdos, F. Deposit date: 2018-03-07 Release date: 2018-09-05 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Discovery of 3-Cyano- N-(3-(1-isobutyrylpiperidin-4-yl)-1-methyl-4-(trifluoromethyl)-1 H-pyrrolo[2,3- b]pyridin-5-yl)benzamide: A Potent, Selective, and Orally Bioavailable Retinoic Acid Receptor-Related Orphan Receptor C2 Inverse Agonist. J. Med. Chem., 61, 2018
1QW0	Crystal Structure of Haemophilus influenzae N175L mutant Holo Ferric ion-Binding Protein A Descriptor: FE (III) ION, Iron-utilization periplasmic protein, PHOSPHATE ION Authors: Shouldice, S.R, Skene, R.J, Dougan, D.R, McRee, D.E, Tari, L.W, Schryvers, A.B. Deposit date: 2003-08-29 Release date: 2003-11-04 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Presence of ferric hydroxide clusters in mutants of Haemophilus influenzae ferric ion-binding protein A Biochemistry, 42, 2003
6LFH	X-ray crystal structure of chemically synthesized human lysozyme Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION Authors: Kar, A, Das, A, Mandal, K. Deposit date: 2019-12-02 Release date: 2020-07-08 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.46 Å) Cite: Efficient Chemical Protein Synthesis using Fmoc-Masked N-Terminal Cysteine in Peptide Thioester Segments. Angew.Chem.Int.Ed.Engl., 59, 2020
6PAC	E. coli L-asparaginase II in complex with L-Asp at pH 5.6 Descriptor: ASPARTIC ACID, IMIDAZOLE, L-asparaginase 2 Authors: Lubkowski, J, Wlodawer, A. Deposit date: 2019-06-11 Release date: 2019-09-04 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci., 28, 2019
9BE4	The post-condensation state of the dimodular NRPS protein LgrA Descriptor: GLYCEROL, Linear gramicidin synthase subunit A, MANGANESE (II) ION, ... Authors: Pistofidis, A, Schmeing, T.M. Deposit date: 2024-04-13 Release date: 2024-11-20 Last modified: 2025-02-19 Method: X-RAY DIFFRACTION (3 Å) Cite: Structures and mechanism of condensation in non-ribosomal peptide synthesis. Nature, 638, 2025
5XAG	Crystal structure of tubulin-stathmin-TTL-Compound Z2 complex Descriptor: (3~{R},4~{R})-3-(hydroxymethyl)-4-(4-methoxy-3-oxidanyl-phenyl)-1-(3,4,5-trimethoxyphenyl)azetidin-2-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ... Authors: Zhang, H, Luo, C, Wang, Y. Deposit date: 2017-03-12 Release date: 2018-01-03 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.56 Å) Cite: Design, synthesis, biological evaluation and cocrystal structures with tubulin of chiral beta-lactam bridged combretastatin A-4 analogues as potent antitumor agents Eur J Med Chem, 144, 2017
8U3P	1.79 Angstrom resolution crystal structure of KatG from Mycobacterium tuberculosis with an MYW cofactor after heat incubation for 60 minutes Descriptor: ACETATE ION, Catalase-peroxidase, GLYCEROL, ... Authors: Liu, A, Li, J, Ran, D. Deposit date: 2023-09-08 Release date: 2024-09-11 Last modified: 2024-12-11 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Indole N-Linked Hydroperoxyl Adduct of Protein-Derived Cofactor Modulating Catalase-Peroxidase Functions. Angew.Chem.Int.Ed.Engl., 63, 2024
4HJ9	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (CGGTTACGGT) Descriptor: DNA (5'-D(*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, Wuttke, D.S. Deposit date: 2012-10-12 Release date: 2012-12-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
4HIO	Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTAACGGT) Descriptor: DNA (5'-D(*GP*GP*TP*AP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1 Authors: Dickey, T.H, McKercher, M.A, Wuttke, D.S. Deposit date: 2012-10-11 Release date: 2012-12-12 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.753 Å) Cite: Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes. Structure, 21, 2013
5XLT	The crystal structure of tubulin in complex with 4'-demethylepipodophyllotoxin Descriptor: (5S,5aR,8aR,9R)-9-(3,5-dimethoxy-4-oxidanyl-phenyl)-5-oxidanyl-5a,6,8a,9-tetrahydro-5H-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ... Authors: Yu, Y, Chen, Q. Deposit date: 2017-05-11 Release date: 2017-09-27 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (2.813 Å) Cite: Structure of 4'-demethylepipodophyllotoxin in complex with tubulin provides a rationale for drug design Biochem. Biophys. Res. Commun., 493, 2017
1J3H	Crystal structure of apoenzyme cAMP-dependent protein kinase catalytic subunit Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, cAMP-dependent protein kinase, alpha-catalytic subunit Authors: Akamine, P, Madhusudan, Wu, J, Xuong, N.H, Ten Eyck, L.F, Taylor, S.S. Deposit date: 2003-01-31 Release date: 2003-03-04 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Dynamic Features of cAMP-dependent Protein Kinase Revealed by Apoenzyme Crystal Structure J.Mol.Biol., 327, 2003

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