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8DVE
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BU of 8dve by Molmil
RyR1 in presence of IpCa-T26E phosphomimetic and activating ligands
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CAFFEINE, CALCIUM ION, ...
Authors:Haji-Ghassemi, O, Van Petegm, F.
Deposit date:2022-07-28
Release date:2023-05-31
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Cryo-EM analysis of scorpion toxin binding to Ryanodine Receptors reveals subconductance that is abolished by PKA phosphorylation.
Sci Adv, 9, 2023
6LY3
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BU of 6ly3 by Molmil
PylRS C-terminus domain mutant bound with 3-Benzothienyl-L-alanine and AMPNP
Descriptor: 3-(1-benzothiophen-3-yl)-L-alanine, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Weng, J.H, Tsai, M.D, Wang, Y.S.
Deposit date:2020-02-13
Release date:2020-07-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.89590144 Å)
Cite:Probing the Active Site of Deubiquitinase USP30 with Noncanonical Tryptophan Analogues.
Biochemistry, 59, 2020
1J4B
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BU of 1j4b by Molmil
Recombinant Mouse-Muscle Adenylosuccinate Synthetase
Descriptor: adenylosuccinate synthetase
Authors:Iancu, C.V, Borza, T, Choe, J.Y, Fromm, H.J, Honzatko, R.B.
Deposit date:2001-09-07
Release date:2001-11-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Recombinant mouse muscle adenylosuccinate synthetase: overexpression, kinetics, and crystal structure.
J.Biol.Chem., 276, 2001
5KUH
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BU of 5kuh by Molmil
GluK2EM with LY466195
Descriptor: (3S,4aR,6S,8aR)-6-{[(2S)-2-carboxy-4,4-difluoropyrrolidin-1-yl]methyl}decahydroisoquinoline-3-carboxylic acid, Glutamate receptor ionotropic, kainate 2
Authors:Meyerson, J.R, Chittori, S, Merk, A, Rao, P, Han, T.H, Serpe, M, Mayer, M.L, Subramaniam, S.
Deposit date:2016-07-13
Release date:2016-09-07
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (11.6 Å)
Cite:Structural basis of kainate subtype glutamate receptor desensitization.
Nature, 537, 2016
4XW7
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BU of 4xw7 by Molmil
Crystal structure of the ZMP riboswitch at 2.50 angstrom
Descriptor: AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ...
Authors:Trausch, J.J, Batey, R.T.
Deposit date:2015-01-28
Release date:2015-09-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Metal Ion-Mediated Nucleobase Recognition by the ZTP Riboswitch.
Chem.Biol., 22, 2015
2IUA
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BU of 2iua by Molmil
C. trachomatis LpxD
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PALMITIC ACID, SULFATE ION, ...
Authors:Buetow, L, Smith, T.K, Dawson, A, Fyffe, S, Hunter, W.N.
Deposit date:2006-05-30
Release date:2007-02-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and Reactivity of Lpxd, the N-Acyltransferase of Lipid a Biosynthesis
Proc.Natl.Acad.Sci.USA, 104, 2007
5HRN
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BU of 5hrn by Molmil
HIV Integrase Catalytic Domain containing F185K mutation complexed with GSK0002
Descriptor: (2S)-tert-butoxy[1-(3,4-difluorobenzyl)-6-methyl-4-(5-methyl-3,4-dihydro-2H-chromen-6-yl)-1H-pyrrolo[2,3-b]pyridin-5-yl]acetic acid, 1,2-ETHANEDIOL, CACODYLATE ION, ...
Authors:Nolte, R.T.
Deposit date:2016-01-23
Release date:2016-12-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Inhibitor-Induced Aggregation of HIV Integrase.
PLoS Biol., 14, 2016
4DLP
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BU of 4dlp by Molmil
Crystal structure of methionyl-tRNA synthetase MetRS from Brucella melitensis bound to selenomethionine
Descriptor: Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-02-06
Release date:2012-02-15
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Brucella melitensis Methionyl-tRNA-Synthetase (MetRS), a Potential Drug Target for Brucellosis.
Plos One, 11, 2016
8T1I
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BU of 8t1i by Molmil
Atomic model of the mammalian Mediator complex with MED26 subunit
Descriptor: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
Authors:Zhao, H, Asturias, F.
Deposit date:2023-06-02
Release date:2024-06-12
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.68 Å)
Cite:An IDR-dependent mechanism for nuclear receptor control of Mediator interaction with RNA polymerase II.
Mol.Cell, 84, 2024
4ARI
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BU of 4ari by Molmil
Ternary complex of E. coli leucyl-tRNA synthetase, tRNA(leu) and the benzoxaborole AN2679 in the editing conformation
Descriptor: GLYCEROL, LEUCINE--TRNA LIGASE, MAGNESIUM ION, ...
Authors:Palencia, A, Crepin, T, Vu, M.T, Lincecum Jr, T.L, Martinis, S.A, Cusack, S.
Deposit date:2012-04-24
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural Dynamics of the Aminoacylation and Proofreading Functional Cycle of Bacterial Leucyl-tRNA Synthetase
Nat.Struct.Mol.Biol., 19, 2012
8T1L
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BU of 8t1l by Molmil
Atomic model of the mammalian mouse Mediator complex with CKM module
Descriptor: Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, Mediator of RNA polymerase II transcription subunit 11, ...
Authors:Zhao, H, Asturias, F.
Deposit date:2023-06-02
Release date:2024-07-03
Last modified:2025-01-15
Method:ELECTRON MICROSCOPY (4.83 Å)
Cite:An IDR-dependent mechanism for nuclear receptor control of Mediator interaction with RNA polymerase II.
Mol.Cell, 84, 2024
5I5S
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BU of 5i5s by Molmil
X-RAY CRYSTAL STRUCTURE AT 2.06A RESOLUTION OF HUMAN MITOCHONDRIAL BRANCHED CHAIN AMINOTRANSFERASE (BCATM) COMPLEXED WITH A BENZISOXAZOLE COMPOUND AND AN INTERNAL ALDIMINE LINKED PLP COFACTOR.
Descriptor: 1,2-ETHANEDIOL, 2-(1,2-benzoxazol-3-yl)ethanoic acid, Branched-chain-amino-acid aminotransferase, ...
Authors:Somers, D.
Deposit date:2016-02-15
Release date:2016-03-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structurally Diverse Mitochondrial Branched Chain Aminotransferase (BCATm) Leads with Varying Binding Modes Identified by Fragment Screening.
J.Med.Chem., 59, 2016
7Y27
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BU of 7y27 by Molmil
Cryo-EM structure of the SST-14-bound SSTR2-miniGq-scFv16 complex
Descriptor: CHOLESTEROL, Engineered Guanine nucleotide-binding protein G(q) subunit alpha, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Chen, S, Zheng, S.
Deposit date:2022-06-09
Release date:2022-10-19
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Molecular basis for the selective G protein signaling of somatostatin receptors.
Nat.Chem.Biol., 19, 2023
7Y26
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BU of 7y26 by Molmil
Cryo-EM structure of the octreotide-bound SSTR2-miniGq-scFv16 complex
Descriptor: Engineered Guanine nucleotide-binding protein G(q) subunit alpha, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Chen, S, Zheng, S.
Deposit date:2022-06-09
Release date:2022-10-19
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis for the selective G protein signaling of somatostatin receptors.
Nat.Chem.Biol., 19, 2023
5IBH
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BU of 5ibh by Molmil
Crystal structure Mycobacterium tuberculosis CYP121 in complex with inhibitor fragment 26h
Descriptor: 4,4'-(5-{[(1H-imidazol-4-yl)methyl]amino}-1H-pyrazole-3,4-diyl)diphenol, Cytochrome P450 121 CYP121, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Levy, C.
Deposit date:2016-02-22
Release date:2016-04-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.0201 Å)
Cite:Fragment-Based Approaches to the Development of Mycobacterium tuberculosis CYP121 Inhibitors.
J.Med.Chem., 59, 2016
1ACM
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BU of 1acm by Molmil
ARGININE 54 IN THE ACTIVE SITE OF ESCHERICHIA COLI ASPARTATE TRANSCARBAMOYLASE IS CRITICAL FOR CATALYSIS: A SITE-SPECIFIC MUTAGENESIS, NMR AND X-RAY CRYSTALLOGRAPHY STUDY
Descriptor: ASPARTATE CARBAMOYLTRANSFERASE REGULATORY CHAIN, ASPARTATE CARBAMOYLTRANSFERASE, CATALYTIC CHAIN, ...
Authors:Stevens, R.C, Kantrowitz, E.R, Lipscomb, W.N.
Deposit date:1992-07-08
Release date:1992-07-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Arginine 54 in the active site of Escherichia coli aspartate transcarbamoylase is critical for catalysis: a site-specific mutagenesis, NMR, and X-ray crystallographic study.
Protein Sci., 1, 1992
3VQX
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BU of 3vqx by Molmil
Crystal structure of the catalytic domain of pyrrolysyl-tRNA synthetase in triclinic crystal form
Descriptor: ADENOSINE MONOPHOSPHATE, PHOSPHATE ION, Pyrrolysine--tRNA ligase, ...
Authors:Yanagisawa, T, Sumida, T, Ishii, R, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2012-04-02
Release date:2013-01-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel crystal form of pyrrolysyl-tRNA synthetase reveals the pre- and post-aminoacyl-tRNA synthesis conformational states of the adenylate and aminoacyl moieties and an asparagine residue in the catalytic site
Acta Crystallogr.,Sect.D, 69, 2013
4Y7S
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BU of 4y7s by Molmil
Crystal Structure of the CFEM protein Csa2
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, HEME B/C, ...
Authors:Dvir, H, Weissman, Z, Nasser, L, Hiya, D, Kornitzer, D.
Deposit date:2015-02-16
Release date:2016-08-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of haem-iron acquisition by fungal pathogens.
Nat Microbiol, 1, 2016
4DJH
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BU of 4djh by Molmil
Structure of the human kappa opioid receptor in complex with JDTic
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (3R)-7-hydroxy-N-{(2S)-1-[(3R,4R)-4-(3-hydroxyphenyl)-3,4-dimethylpiperidin-1-yl]-3-methylbutan-2-yl}-1,2,3,4-tetrahydroisoquinoline-3-carboxamide, CITRIC ACID, ...
Authors:Wu, H, Wacker, D, Katritch, V, Mileni, M, Han, G.W, Vardy, E, Liu, W, Thompson, A.A, Huang, X.P, Carroll, F.I, Mascarella, S.W, Westkaemper, R.B, Mosier, P.D, Roth, B.L, Cherezov, V, Stevens, R.C, GPCR Network (GPCR)
Deposit date:2012-02-01
Release date:2012-03-21
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:tructure of the human kappa-opioid receptor in complex with JDTic
Nature, 485, 2012
5I5Y
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BU of 5i5y by Molmil
X-RAY CRYSTAL STRUCTURE AT 1.81A RESOLUTION OF HUMAN MITOCHONDRIAL BRANCHED CHAIN AMINOTRANSFERASE (BCATM) COMPLEXED WITH AN ARYL ACETATE COMPOUND AND AN INTERNAL ALDIMINE LINKED PLP COFACTOR.
Descriptor: 1,2-ETHANEDIOL, Branched-chain-amino-acid aminotransferase, mitochondrial, ...
Authors:Somers, D.O.
Deposit date:2016-02-15
Release date:2016-03-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structurally Diverse Mitochondrial Branched Chain Aminotransferase (BCATm) Leads with Varying Binding Modes Identified by Fragment Screening.
J.Med.Chem., 59, 2016
6SJ4
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BU of 6sj4 by Molmil
Amidohydrolase, AHS with substrate analog
Descriptor: 1,2-ETHANEDIOL, 3-(3-hydroxyphenyl)carbonyloxybenzoic acid, Amidohydrolase, ...
Authors:Naismith, J.H, Song, H.
Deposit date:2019-08-12
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JQM
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BU of 6jqm by Molmil
Structure of PaaZ with NADPH
Descriptor: Bifunctional protein PaaZ, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Gakher, L, Vinothkumar, K.R, Katagihallimath, N, Sowdhamini, R, Sathyanarayanan, N, Cannone, G.
Deposit date:2019-03-31
Release date:2019-09-11
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Molecular basis for metabolite channeling in a ring opening enzyme of the phenylacetate degradation pathway.
Nat Commun, 10, 2019
7U5N
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BU of 7u5n by Molmil
Cryo-EM Structure of Glutamine Synthetase
Descriptor: Glutamine synthetase, MANGANESE (II) ION
Authors:Morgan, C.E, Yu, E.W, Zhang, Z.
Deposit date:2022-03-02
Release date:2022-12-14
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Toward structural-omics of the bovine retinal pigment epithelium.
Cell Rep, 41, 2022
1F21
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BU of 1f21 by Molmil
DIVALENT METAL COFACTOR BINDING IN THE KINETIC FOLDING TRAJECTORY OF E. COLI RIBONUCLEASE HI
Descriptor: RIBONUCLEASE HI
Authors:Goedken, E.R, Keck, J.L, Berger, J.M, Marqusee, S.
Deposit date:2000-05-22
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Divalent metal cofactor binding in the kinetic folding trajectory of Escherichia coli ribonuclease HI.
Protein Sci., 9, 2000
5IBD
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BU of 5ibd by Molmil
Crystal structure Mycobacterium tuberculosis CYP121 in complex with inhibitor fragment 24a
Descriptor: 4-(3'-amino[1,1'-biphenyl]-3-yl)-3-(4-methoxyphenyl)-1H-pyrazol-5-amine, Mycocyclosin synthase, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Levy, C.
Deposit date:2016-02-22
Release date:2016-04-06
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Fragment-Based Approaches to the Development of Mycobacterium tuberculosis CYP121 Inhibitors.
J.Med.Chem., 59, 2016

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