Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3KD7
DownloadVisualize
BU of 3kd7 by Molmil
Designed TPR module (CTPR390) in complex with its peptide-ligand (Hsp90 peptide)
Descriptor: CTPR390, Hsp90 MEEVD peptide
Authors:Cortajarena, A.L, Wang, J, Regan, L.
Deposit date:2009-10-22
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Crystal structure of a designed tetratricopeptide repeat module in complex with its peptide ligand.
Febs J., 277, 2010
4EPQ
DownloadVisualize
BU of 4epq by Molmil
canonical poly(ADP-ribose) glycohydrolase RBPI inhibitor complex from Tetrahymena thermophila
Descriptor: 3-{(5Z)-5-[5-chloro-1-(2,6-dichlorobenzyl)-2-oxo-1,2-dihydro-3H-indol-3-ylidene]-4-oxo-2-thioxo-1,3-thiazolidin-3-yl}propanoic acid, Poly(ADP-ribose) glycohydrolase
Authors:Dunstan, M.S, Leys, D.
Deposit date:2012-04-17
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structure and mechanism of a canonical poly(ADP-ribose) glycohydrolase.
Nat Commun, 3, 2012
3FQ8
DownloadVisualize
BU of 3fq8 by Molmil
M248I mutant of GSAM
Descriptor: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate-1-semialdehyde 2,1-aminomutase
Authors:Stetefeld, J.
Deposit date:2009-01-07
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Absence of a catalytic water confers resistance to the neurotoxin gabaculine.
Faseb J., 24, 2010
3FQA
DownloadVisualize
BU of 3fqa by Molmil
Gabaculien complex of gabaculine resistant GSAM version
Descriptor: 3-AMINOBENZOIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Glutamate-1-semialdehyde 2,1-aminomutase
Authors:Stetefeld, J.
Deposit date:2009-01-07
Release date:2009-11-24
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Absence of a catalytic water confers resistance to the neurotoxin gabaculine.
Faseb J., 24, 2010
3FQ7
DownloadVisualize
BU of 3fq7 by Molmil
Gabaculine complex of GSAM
Descriptor: 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID, Glutamate-1-semialdehyde 2,1-aminomutase
Authors:Stetefeld, J.
Deposit date:2009-01-07
Release date:2009-11-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Absence of a catalytic water confers resistance to the neurotoxin gabaculine.
Faseb J., 24, 2010
4EPP
DownloadVisualize
BU of 4epp by Molmil
Canonical poly(ADP-ribose) glycohydrolase from Tetrahymena thermophila.
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Poly(ADP-ribose) glycohydrolase
Authors:Dunstan, M.S, Leys, D.
Deposit date:2012-04-17
Release date:2012-06-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and mechanism of a canonical poly(ADP-ribose) glycohydrolase.
Nat Commun, 3, 2012
5IXG
DownloadVisualize
BU of 5ixg by Molmil
Crystal Structure of Burkholderia cenocepacia BcnB
Descriptor: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, YceI
Authors:Loutet, S.A, Murphy, M.E.P.
Deposit date:2016-03-23
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance.
MBio, 8, 2017
7MYG
DownloadVisualize
BU of 7myg by Molmil
M. tb Ag85C modified by THL-10d
Descriptor: Diacylglycerol acyltransferase, GLYCEROL
Authors:Sudasinghe, T.D, Ronning, D.R.
Deposit date:2021-05-21
Release date:2021-09-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Total Synthesis of Tetrahydrolipstatin, Its Derivatives, and Evaluation of Their Ability to Potentiate Multiple Antibiotic Classes against Mycobacterium Species.
Acs Infect Dis., 7, 2021
3I70
DownloadVisualize
BU of 3i70 by Molmil
Long-wavelength structure of NtA
Descriptor: Agrin
Authors:Stetefeld, J.
Deposit date:2009-07-07
Release date:2010-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:An interdomain disulfide bridge links the NtA and first FS domain in agrin.
Protein Sci., 18, 2009
7W0X
DownloadVisualize
BU of 7w0x by Molmil
Tetrameric antiparallel G-quadruplex formed by natural human telomeric sequence
Descriptor: DNA (5'-D(*GP*GP*GP*TP*TP*A)-3')
Authors:Jing, H.T, Fu, W.Q.
Deposit date:2021-11-18
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of an alternating antiparallel tetrameric G-quadruplex assembled by the single-repeat of human telomeric DNA d(GGGTTA)
To Be Published
7X5O
DownloadVisualize
BU of 7x5o by Molmil
Crystal structure of E. faecium SHMT in complex with Me-THF and PLP-Gly
Descriptor: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, Serine hydroxymethyltransferase
Authors:Hasegawa, K, Hayashi, H.
Deposit date:2022-03-05
Release date:2022-07-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Serine hydroxymethyltransferase as a potential target of antibacterial agents acting synergistically with one-carbon metabolism-related inhibitors.
Commun Biol, 5, 2022
1WSV
DownloadVisualize
BU of 1wsv by Molmil
Crystal Structure of Human T-protein of Glycine Cleavage System
Descriptor: Aminomethyltransferase, N-[4-({[(6S)-2-AMINO-4-HYDROXY-5-METHYL-5,6,7,8-TETRAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GLUTAMIC ACID, SULFATE ION
Authors:Okamura-Ikeda, K, Hosaka, H, Yoshimura, M, Yamashita, E, Toma, S, Nakagawa, A, Fujiwara, K, Motokawa, Y, Taniguchi, H.
Deposit date:2004-11-11
Release date:2005-08-16
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of Human T-protein of Glycine Cleavage System at 2.0A Resolution and its Implication for Understanding Non-ketotic Hyperglycinemia
J.Mol.Biol., 351, 2005
3TEJ
DownloadVisualize
BU of 3tej by Molmil
Crystal structure of a domain fragment involved in peptide natural product biosynthesis
Descriptor: Enterobactin synthase component F
Authors:Liu, Y, Zheng, T, Bruner, S.D.
Deposit date:2011-08-15
Release date:2012-01-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for phosphopantetheinyl carrier domain interactions in the terminal module of nonribosomal peptide synthetases.
Chem.Biol., 18, 2011
3UYH
DownloadVisualize
BU of 3uyh by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide compound, MM41
Descriptor: 4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}-2,7-bis[3-(morpholin-4-yl)propyl]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, POTASSIUM ION, human telomeric DNA sequence
Authors:Collie, G.W, Neidle, S.
Deposit date:2011-12-06
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based design and evaluation of naphthalene diimide g-quadruplex ligands as telomere targeting agents in pancreatic cancer cells.
J.Med.Chem., 56, 2013
2B2A
DownloadVisualize
BU of 2b2a by Molmil
Crystal Structure of the TEN domain of the Telomerase Reverse Transcriptase
Descriptor: Telomerase reverse transcriptase
Authors:Jacobs, S.A, Podell, E.R, Cech, T.R.
Deposit date:2005-09-18
Release date:2006-02-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal structure of the essential N-terminal domain of telomerase reverse transcriptase.
Nat.Struct.Mol.Biol., 13, 2006
2R4G
DownloadVisualize
BU of 2r4g by Molmil
The high resolution structure of the RNA-binding domain of telomerase
Descriptor: BROMIDE ION, Telomerase reverse transcriptase
Authors:Rouda, S, Skordalakes, E.
Deposit date:2007-08-31
Release date:2007-11-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structure of the RNA-Binding Domain of Telomerase: Implications for RNA Recognition and Binding.
Structure, 15, 2007
2RES
DownloadVisualize
BU of 2res by Molmil
Tetracenomycin ARO/CYC mutant R69A
Descriptor: Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
Authors:Ames, B.D, Tsai, S.C.
Deposit date:2007-09-26
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and functional analysis of tetracenomycin ARO/CYC: implications for cyclization specificity of aromatic polyketides.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1PLU
DownloadVisualize
BU of 1plu by Molmil
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI WITH 1 LU+3 ION IN THE PUTATIVE CALCIUM BINDING SITE
Descriptor: LUTETIUM (III) ION, PROTEIN (PECTATE LYASE C)
Authors:Yoder, M.D, Jurnak, F.A.
Deposit date:1999-06-04
Release date:1999-07-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Refined Three-Dimensional Structure of Pectate Lyase C from Erwinia chrysanthemi at 2.2 Angstrom Resolution (Implications for an Enzymatic Mechanism).
Plant Physiol., 107, 1995
1S9A
DownloadVisualize
BU of 1s9a by Molmil
Crystal Structure of 4-Chlorocatechol 1,2-dioxygenase from Rhodococcus opacus 1CP
Descriptor: (1-HEXADECANOYL-2-TETRADECANOYL-GLYCEROL-3-YL) PHOSPHONYL CHOLINE, BENZOIC ACID, Chlorocatechol 1,2-dioxygenase, ...
Authors:Ferraroni, M, Solyanikova, I.P, Kolomytseva, M.P, Scozzafava, A, Golovleva, L.A, Briganti, F.
Deposit date:2004-02-04
Release date:2004-06-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.47 Å)
Cite:Crystal structure of 4-chlorocatechol 1,2-dioxygenase from the chlorophenol-utilizing gram-positive Rhodococcus opacus 1CP.
J.Biol.Chem., 279, 2004
2REZ
DownloadVisualize
BU of 2rez by Molmil
Tetracenomycin ARO/CYC NaI Structure
Descriptor: ACETATE ION, IODIDE ION, Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN
Authors:Ames, B.D, Tsai, S.C.
Deposit date:2007-09-27
Release date:2008-04-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure and functional analysis of tetracenomycin ARO/CYC: implications for cyclization specificity of aromatic polyketides.
Proc.Natl.Acad.Sci.Usa, 105, 2008
1FRF
DownloadVisualize
BU of 1frf by Molmil
CRYSTAL STRUCTURE OF THE NI-FE HYDROGENASE FROM DESULFOVIBRIO FRUCTOSOVORANS
Descriptor: FE (III) ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Montet, Y, Volbeda, A, Piras, C, Hatchikian, E.C, Frey, M, Fontecilla, J.C.
Deposit date:1998-07-21
Release date:1998-07-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:3Fe-4S] to [4Fe-4S] cluster conversion in Desulfovibrio fructosovorans [NiFe] hydrogenase by site-directed mutagenesis
Proc.Natl.Acad.Sci.USA, 95, 1998
1MZ9
DownloadVisualize
BU of 1mz9 by Molmil
Storage function of COMP:the crystal structure of the coiled-coil domain in complex with vitamin D3
Descriptor: 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, cartilage oligomeric matrix protein
Authors:Stetefeld, J.
Deposit date:2002-10-07
Release date:2003-01-28
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Storage function of cartilage oligomeric matrix protein: the crystal structure of the coiled-coil domain in complex with vitamin D(3).
EMBO J., 21, 2002
3SUX
DownloadVisualize
BU of 3sux by Molmil
Crystal structure of THF riboswitch, bound with THF
Descriptor: 5-HYDROXYMETHYLENE-6-HYDROFOLIC ACID, Riboswitch, SODIUM ION
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2011-07-11
Release date:2011-09-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3SUY
DownloadVisualize
BU of 3suy by Molmil
Crystal structure of THF riboswitch, unbound status
Descriptor: riboswitch
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2011-07-11
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Long-range pseudoknot interactions dictate the regulatory response in the tetrahydrofolate riboswitch.
Proc.Natl.Acad.Sci.USA, 108, 2011
3V2P
DownloadVisualize
BU of 3v2p by Molmil
COMPcc in complex with fatty acids
Descriptor: Cartilage Oligomerization matrix protein (coiled-coil domain), STEARIC ACID
Authors:Stetefeld, J.
Deposit date:2011-12-12
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.873 Å)
Cite:The pentameric channel of COMPcc in complex with different fatty acids.
Plos One, 7, 2012

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon