PDB: 45118 resultsInfo pagesStatus searchChemie searchBIRD

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4OKI	X-ray structure of the nucleotide-binding subdomain of the enoylreductase domain of PpsC from Mycobacterium tuberculosis Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Phthiocerol synthesis polyketide synthase type I PpsC, SODIUM ION Authors: Faille, A, Mourey, L, Pedelacq, J.D. Deposit date: 2014-01-22 Release date: 2015-08-05 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Insights into the catalytic mechanism of the DH domain of the Mycobacterium tuberculosis polyketide synthase PpsC and architecture of the beta-carbon processing domains To be Published
4RPX	Precatalytic ternary complex of Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine (8-oxoG) and dCTP in the presence of CaCl2 Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ACETATE ION, CALCIUM ION, ... Authors: Vyas, R, Suo, Z. Deposit date: 2014-10-31 Release date: 2015-04-15 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
2HU1	Crystal structure Analysis of Hen Egg White Lyszoyme Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ... Authors: Wine, Y, Cohen-Hadar, N, Freeman, A, Lagziel-Simis, S, Frolow, F. Deposit date: 2006-07-26 Release date: 2007-05-22 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (1.63 Å) Cite: Elucidation of the mechanism and end products of glutaraldehyde crosslinking reaction by X-ray structure analysis Biotechnol.Bioeng., 98, 2007
3L88	Crystal structure of the human Adenovirus type 21 fiber knob Descriptor: CHLORIDE ION, Fiber protein, GLYCEROL, ... Authors: Cupelli, K, Jost, M, Persson, B.D, Stehle, T. Deposit date: 2009-12-30 Release date: 2010-04-14 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of adenovirus type 21 knob in complex with CD46 reveals key differences in receptor contacts among species B adenoviruses. J.Virol., 84, 2010
4RPY	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine(8-oxoG) and dCTP soaked with MgCl2 for 30 s Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ACETATE ION, CHLORIDE ION, ... Authors: Vyas, R, Suo, Z. Deposit date: 2014-10-31 Release date: 2015-04-15 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
3Q9F	Crystal Structure of APAH complexed with CAPS Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Acetylpolyamine amidohydrolase, PHOSPHATE ION, ... Authors: Lombardi, P.M, Christianson, D.W. Deposit date: 2011-01-07 Release date: 2011-03-02 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structure of prokaryotic polyamine deacetylase reveals evolutionary functional relationships with eukaryotic histone deacetylases . Biochemistry, 50, 2011
5X8V	Y92H mutant of thermus thermophilus HB8 thymidylate kinase Descriptor: CHLORIDE ION, SODIUM ION, Thymidylate kinase Authors: Chaudhary, S.K, Jeyakanthan, J, Sekar, K. Deposit date: 2017-03-03 Release date: 2018-03-14 Last modified: 2024-03-27 Method: X-RAY DIFFRACTION (1.66 Å) Cite: Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol, 74, 2018
4F9O	Crystal Structure of recombinant human Hexokinase type I with 2-deoxy-Glucose 6-Phosphate Descriptor: 2-deoxy-6-O-phosphono-beta-D-glucopyranose, CITRIC ACID, Hexokinase-1, ... Authors: Shen, L, Honzatko, R.B. Deposit date: 2012-05-19 Release date: 2013-06-12 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Inhibitor Sites of Unequal Affinity Linked by Binding Synergism in Mutant Forms of Recombinant Human Hexokinase Type-I to be published
8GT0	Structure of falcipain and human Stefin A complex Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, CHLORIDE ION, ... Authors: Chakraborty, S, Biswas, S. Deposit date: 2022-09-07 Release date: 2023-09-13 Method: X-RAY DIFFRACTION (3.28 Å) Cite: Structure of falcipain and human Stefin A complex To Be Published
4FOI	Crystal Structure of recombinant human Hexokinase type I mutant D413N with Glucose 1,6-bisphosphate Descriptor: 1,6-di-O-phosphono-alpha-D-glucopyranose, CITRIC ACID, Hexokinase-1, ... Authors: Shen, L, Honzatko, R.B. Deposit date: 2012-06-20 Release date: 2013-07-03 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.4 Å) Cite: DETERMINATION of SITE AFFINITY CONSTANTS FOR PRODUCT INHIBITION OF WILD-TYPE AND MUTANT FORMS OF RECOMBINANT HUMAN HEXOKINASE TYPE I To be Published
8GT7	Structure of falcipain and human Stefin A mutant complex Descriptor: 1,2-ETHANEDIOL, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Cystatin-A, ... Authors: Chakraborty, S, Biswas, S. Deposit date: 2022-09-07 Release date: 2023-09-13 Method: X-RAY DIFFRACTION (3.28 Å) Cite: Structure of falcipain and human Stefin A complex To Be Published
4FPA	Crystal Structure of recombinant human Hexokinase type I mutant D413N Glucose 6-Phosphate Descriptor: 6-O-phosphono-beta-D-glucopyranose, CITRIC ACID, Hexokinase-1, ... Authors: Shen, L, Honzatko, R.B. Deposit date: 2012-06-21 Release date: 2013-07-03 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.48 Å) Cite: DETERMINATION OF SITE AFFINITY CONSTANTS FOR PRODUCT INHIBITION of WILD-TYPE AND MUTANT FORMS OF RECOMBINANT HUMAN HEXOKINASE TYPE I To be Published
3HX0	ternary complex of L277A, H511A, R514 mutant pol lambda bound to a 2 nucleotide gapped DNA substrate with a scrunched dA Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, 5'-D(*CP*AP*GP*TP*AP*T)-3', 5'-D(*CP*GP*GP*CP*AP*AP*AP*TP*AP*CP*TP*G)-3', ... Authors: Garcia-Diaz, M, Bebenek, K, Larrea, A.A, Havener, J.M, Perera, L, Krahn, J.M, Pedersen, L.C, Ramsden, D.A, Kunkel, T.A. Deposit date: 2009-06-19 Release date: 2009-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3 Å) Cite: Scrunching During DNA Repair Synthesis To be Published
4FPB	Crystal Structure of Recombinant Human Hexokinase Type I with 1,5-Anhydroglucitol 6-Phosphate Descriptor: 1,5-anhydro-6-O-phosphono-D-glucitol, CITRIC ACID, Hexokinase-1, ... Authors: Shen, L, Honzatko, R.B. Deposit date: 2012-06-21 Release date: 2013-07-03 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (3 Å) Cite: Inhibitor Sites of Unequal Affinity Linked by Binding Synergism in Mutant Forms of Recombinant Human Hexokinase Type-I to be published
3HVY	Crystal structure of putative cystathionine beta-lyase involved in aluminum resistance (NP_348457.1) from Clostridium acetobutylicum at 2.00 A resolution Descriptor: 1,2-ETHANEDIOL, Cystathionine beta-lyase family protein, YNBB B.subtilis ortholog, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-06-16 Release date: 2009-06-30 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of putative cystathionine beta-lyase involved in aluminum resistance (NP_348457.1) from Clostridium acetobutylicum at 2.00 A resolution To be published
2IW2	Crystal structure of human Prolidase Descriptor: SODIUM ION, XAA-PRO DIPEPTIDASE Authors: Mueller, U, Niesen, F.H, Roske, Y, Goetz, F, Behlke, J, Buessow, K, Heinemann, U. Deposit date: 2006-06-24 Release date: 2006-07-05 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (1.82 Å) Cite: Crystal Structure of Human Prolidase: The Molecular Basis of Pd Disease To be Published
3IHV	Crystal structure of SusD homolog (NP_813570.1) from Bacteroides thetaiotaomicron VPI-5482 at 1.70 A resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-07-30 Release date: 2009-08-11 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Crystal structure of SusD homolog (NP_813570.1) from Bacteroides thetaiotaomicron VPI-5482 at 1.70 A resolution To be Published
3VH9	Crystal structure of Aeromonas proteolytica aminopeptidase complexed with 8-quinolinol Descriptor: Bacterial leucyl aminopeptidase, CHLORIDE ION, GLYCEROL, ... Authors: Saijo, S, Hanaya, K, Suetsugu, M, Kobayashi, K, Yamato, I, Aoki, S. Deposit date: 2011-08-24 Release date: 2012-05-02 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.29 Å) Cite: Potent inhibition of dinuclear zinc(II) peptidase, an aminopeptidase from Aeromonas proteolytica, by 8-quinolinol derivatives: inhibitor design based on Zn(2+) fluorophores, kinetic, and X-ray crystallographic study. J.Biol.Inorg.Chem., 17, 2012
6YII	Crystal structure of a Class III adenylyl cyclase-like ATP-binding protein from Pseudomonas aeruginosa Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ... Authors: Moniot, S, Steegborn, C. Deposit date: 2020-04-01 Release date: 2020-06-17 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (1.44 Å) Cite: Crystal structure of a class III adenylyl cyclase-like ATP-binding protein from Pseudomonas aeruginosa. J.Struct.Biol., 211, 2020
5TB9	Precatalytic ternary complex of Human DNA Polymerase Beta in closed conformation With Gapped DNA substrate incoming (-)FTC-TP and Mn2+. Descriptor: 10- MER PRIMER, 16- MER TEMPLATE, 5-MER PHOSPHORYLATED DOWNSTREAM PRIMER, ... Authors: Vyas, R, Suo, Z. Deposit date: 2016-09-11 Release date: 2017-01-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase. J. Am. Chem. Soc., 139, 2017
5TBB	Postcatalytic ternary complex of Human DNA Polymerase Beta with Gapped DNA substrate, incorporated (-)FTC and PPi. Descriptor: 10- MER PRIMER, 16- MER TEMPLATE, 5-MER PHOSPHORYLATED DOWNSTREAM PRIMER, ... Authors: Vyas, R, Suo, Z. Deposit date: 2016-09-11 Release date: 2017-01-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.39 Å) Cite: Structural Insights into the Post-Chemistry Steps of Nucleotide Incorporation Catalyzed by a DNA Polymerase. J. Am. Chem. Soc., 139, 2017
5TEJ	Structure of 4-Hydroxy-tetrahydrodipicolinate Reductase from Vibrio vulnificus with 2,5 Furan Dicarboxylic and NADH Descriptor: 2,5 Furan Dicarboxylic Acid, 4-hydroxy-tetrahydrodipicolinate reductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... Authors: Mank, N, Arnette, K, Klapper, V, Chruszcz, M. Deposit date: 2016-09-21 Release date: 2017-10-18 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Comparative structural and mechanistic studies of 4-hydroxy-tetrahydrodipicolinate reductases from Mycobacterium tuberculosis and Vibrio vulnificus. Biochim Biophys Acta Gen Subj, 1865, 2021
2IZC	APOSTREPTAVIDIN PH 2.0 I222 COMPLEX Descriptor: CHLORIDE ION, SODIUM ION, STREPTAVIDIN Authors: Katz, B.A. Deposit date: 1997-08-13 Release date: 1998-09-16 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Binding of biotin to streptavidin stabilizes intersubunit salt bridges between Asp61 and His87 at low pH. J.Mol.Biol., 274, 1997
5TZV	Binary complex crystal structure of DNA Polymerase Beta with G:T mismatch at the primer terminus Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*T)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... Authors: Wilson, S.H, Batra, V.K. Deposit date: 2016-11-22 Release date: 2016-12-07 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2 Å) Cite: Structures of DNA Polymerase Mispaired DNA Termini Transitioning to Pre-catalytic Complexes Support an Induced-Fit Fidelity Mechanism. Structure, 24, 2016
5W3S	Cryo-electron microscopy structure of a TRPML3 ion channel Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, CHOLESTEROL HEMISUCCINATE, Mucolipin-3 isoform 1, ... Authors: Hirschi, M, Herzik, M.A, Wie, J, Suo, Y, Borschel, W.F, Ren, D, Lander, G.C, Lee, S.Y. Deposit date: 2017-06-08 Release date: 2017-10-11 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: Cryo-electron microscopy structure of the lysosomal calcium-permeable channel TRPML3. Nature, 550, 2017

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