Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XPP
DownloadVisualize
BU of 5xpp by Molmil
Crystal structure of VDR-LBD complexed with 25RS-(Hydroxyphenyl)-2-methylidene-19,26,27-trinor-1,25-dihydroxyvitamin D3
Descriptor: (1~{R},3~{R})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},6~{R})-6-(4-hydroxyphenyl)-6-oxidanyl-hexan-2-yl]-7~{ a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-2-methylidene-cyclohexane-1,3-diol, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
Authors:Kato, A, Itoh, T, Yamamoto, K.
Deposit date:2017-06-03
Release date:2018-06-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Vitamin D Analogues with a p-Hydroxyphenyl Group at the C25 Position: Crystal Structure of Vitamin D Receptor Ligand-Binding Domain Complexed with the Ligand Explains the Mechanism Underlying Full Antagonistic Action
J. Med. Chem., 60, 2017
7MKF
DownloadVisualize
BU of 7mkf by Molmil
Paired helical tau filament extracted from PrP-CAA Patient brain tissue | tau filament | PHF Tau
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Hoq, M.R.
Deposit date:2021-04-23
Release date:2021-07-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structure of Tau filaments in Prion protein amyloidoses.
Acta Neuropathol, 142, 2021
7MKG
DownloadVisualize
BU of 7mkg by Molmil
Straight tau filament extracted from PrP-CAA Patient brain tissue | tau filament | SF Tau
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Hoq, M.R.
Deposit date:2021-04-23
Release date:2021-07-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structure of Tau filaments in Prion protein amyloidoses.
Acta Neuropathol, 142, 2021
7MKH
DownloadVisualize
BU of 7mkh by Molmil
Paired helical tau filament extracted from GSS Patient brain tissue | tau filament from Gerstmann Straussler Scheinker disease | PHF Tau
Descriptor: Isoform Tau-F of Microtubule-associated protein tau
Authors:Hoq, M.R.
Deposit date:2021-04-23
Release date:2021-07-28
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of Tau filaments in Prion protein amyloidoses.
Acta Neuropathol, 142, 2021
1ZYI
DownloadVisualize
BU of 1zyi by Molmil
Solution structure of ICLN, a multifunctional protein involved in regulatory mechanisms as different as cell volume regulation and rna splicing
Descriptor: Methylosome subunit pICln
Authors:Fuerst, J, Schedlbauer, A, Gandini, R, Garavaglia, M.L, Siano, S, Gschwentner, M, Sarg, B, Kontaxis, G, Konrat, R, Paulmichl, M.
Deposit date:2005-06-10
Release date:2005-06-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:ICln159 folds into a pleckstrin homology domain-like structure. Interaction with kinases and the splicing factor LSm4
J.Biol.Chem., 280, 2005
2KWT
DownloadVisualize
BU of 2kwt by Molmil
Solution structure of NS2 [27-59]
Descriptor: Protease NS2-3
Authors:Montserret, R, Bartenschlager, R, Penin, F.
Deposit date:2010-04-19
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional studies of nonstructural protein 2 of the hepatitis C virus reveal its key role as organizer of virion assembly.
Plos Pathog., 6, 2010
2KWZ
DownloadVisualize
BU of 2kwz by Molmil
Solution structure of NS2 [60-99]
Descriptor: Protease NS2-3
Authors:Montserret, R, Bartenschlager, R, Penin, F.
Deposit date:2010-04-22
Release date:2011-03-02
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural and functional studies of nonstructural protein 2 of the hepatitis C virus reveal its key role as organizer of virion assembly.
Plos Pathog., 6, 2010
7CPH
DownloadVisualize
BU of 7cph by Molmil
Crystal structure of tRNA adenosine deaminase from Bacillus subtilis
Descriptor: GLYCEROL, ZINC ION, tRNA-specific adenosine deaminase
Authors:Gaded, V, Mariam, J, Anand, R.
Deposit date:2020-08-07
Release date:2021-06-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Deciphering protein microenvironment by using a cysteine specific switch-ON fluorescent probe.
Org.Biomol.Chem., 19, 2021
3PVI
DownloadVisualize
BU of 3pvi by Molmil
D34G MUTANT OF PVUII ENDONUCLEASE COMPLEXED WITH COGNATE DNA SHOWS THAT ASP34 IS DIRECTLY INVOLVED IN DNA RECOGNITION AND INDIRECTLY INVOLVED IN CATALYSIS
Descriptor: DNA (5'-D(*TP*GP*AP*CP*CP*AP*GP*CP*TP*GP*GP*TP*C)-3'), PROTEIN (PVUII ENDONUCLEASE)
Authors:Horton, J.R, Cheng, X.
Deposit date:1998-10-09
Release date:1998-10-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Asp34 of PvuII endonuclease is directly involved in DNA minor groove recognition and indirectly involved in catalysis.
J.Mol.Biol., 284, 1998
4U68
DownloadVisualize
BU of 4u68 by Molmil
Crystal structure of Rhino chromodomain in complex with H3K9me3
Descriptor: H3K9me3, Rhino
Authors:Yu, B.W, Huang, Y.
Deposit date:2014-07-28
Release date:2015-08-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into Rhino-mediated germline piRNA cluster formation
Cell Res., 25, 2015
5XPO
DownloadVisualize
BU of 5xpo by Molmil
Crystal structure of VDR-LBD complexed with 25-(hydroxyphenyl)-2-methylidene-19,26,27-trinor-25-oxo-1-hydroxyvitamin D3
Descriptor: (5~{R})-5-[(1~{R},3~{a}~{S},4~{E},7~{a}~{R})-7~{a}-methyl-4-[2-[(3~{R},5~{R})-4-methylidene-3,5-bis(oxidanyl)cyclohexyl idene]ethylidene]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-1-yl]-1-(4-hydroxyphenyl)hexan-1-one, Mediator of RNA polymerase II transcription subunit 1, Vitamin D3 receptor
Authors:Kato, A, Itoh, T, Yamamoto, K.
Deposit date:2017-06-03
Release date:2018-06-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Vitamin D Analogues with a p-Hydroxyphenyl Group at the C25 Position: Crystal Structure of Vitamin D Receptor Ligand-Binding Domain Complexed with the Ligand Explains the Mechanism Underlying Full Antagonistic Action
J. Med. Chem., 60, 2017
6DXO
DownloadVisualize
BU of 6dxo by Molmil
1.8 A structure of RsbN-BldN complex.
Descriptor: BldN, RNA polymerase ECF-subfamily sigma factor
Authors:Schumacher, M.A.
Deposit date:2018-06-29
Release date:2018-07-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the RsbN-sigma BldN complex from Streptomyces venezuelae defines a new structural class of anti-sigma factor.
Nucleic Acids Res., 46, 2018
2Y26
DownloadVisualize
BU of 2y26 by Molmil
Transmission defective mutant of Grapevine Fanleaf virus
Descriptor: COAT PROTEIN
Authors:Schellenberger, P, Sauter, C, Lorber, B, Bron, P, Trapani, S, Bergdoll, M, Marmonier, A, Schmitt-Keichinger, C, Lemaire, O, Demangeat, G, Ritzenthaler, C.
Deposit date:2010-12-13
Release date:2011-06-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insights Into Viral Determinants of Nematode Mediated Grapevine Fanleaf Virus Transmission.
Plos Pathog., 7, 2011
1VEC
DownloadVisualize
BU of 1vec by Molmil
Crystal structure of the N-terminal domain of rck/p54, a human DEAD-box protein
Descriptor: ATP-dependent RNA helicase p54, L(+)-TARTARIC ACID, ZINC ION
Authors:Hogetsu, K, Matsui, T, Yukihiro, Y, Tanaka, M, Sato, T, Kumasaka, T, Tanaka, N.
Deposit date:2004-03-29
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural insight of human DEAD-box protein rck/p54 into its substrate recognition with conformational changes
Genes Cells, 11, 2006
2QPA
DownloadVisualize
BU of 2qpa by Molmil
Crystal Structure of S.cerevisiae Vps4 in the presence of ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, PHOSPHATE ION, Vacuolar protein sorting-associated protein 4
Authors:Xiao, J, Xu, Z.
Deposit date:2007-07-23
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural characterization of the ATPase reaction cycle of endosomal AAA protein Vps4.
J.Mol.Biol., 374, 2007
2QRV
DownloadVisualize
BU of 2qrv by Molmil
Structure of Dnmt3a-Dnmt3L C-terminal domain complex
Descriptor: DNA (cytosine-5)-methyltransferase 3-like, DNA (cytosine-5)-methyltransferase 3A, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Jia, D, Cheng, X.
Deposit date:2007-07-29
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of Dnmt3a bound to Dnmt3L suggests a model for de novo DNA methylation.
Nature, 449, 2007
2QJC
DownloadVisualize
BU of 2qjc by Molmil
Crystal structure of a putative diadenosine tetraphosphatase
Descriptor: Diadenosine tetraphosphatase, putative, MANGANESE (II) ION, ...
Authors:Sugadev, R, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2007-07-06
Release date:2007-07-24
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural genomics of protein phosphatases.
J.Struct.Funct.Genom., 8, 2007
1SK5
DownloadVisualize
BU of 1sk5 by Molmil
The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
Descriptor: 5'-D(*CP*TP*TP*TP*TP*AP*AP*AP*AP*G)-3', CALCIUM ION
Authors:Han, G.W, Langs, D, Kopka, M.L, Dickerson, R.E.
Deposit date:2004-03-04
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.89 Å)
Cite:The ultra-high resolution structure of d(CTTTTAAAAG)2: modulation of bending by T-A steps and its role in DNA recognition
To be Published
4LFM
DownloadVisualize
BU of 4lfm by Molmil
Crystal Structure of D-galactose-6-phosphate isomerase in complex with D-psicose
Descriptor: D-psicose, Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
Authors:Jung, W.S, Pan, C.H.
Deposit date:2013-06-27
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
4LFK
DownloadVisualize
BU of 4lfk by Molmil
Crystal Structure of D-galactose-6-phosphate isomerase in a substrate-free form
Descriptor: Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
Authors:Jung, W.S, Pan, C.H.
Deposit date:2013-06-27
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
4LFL
DownloadVisualize
BU of 4lfl by Molmil
Crystal Structure of D-galactose-6-phosphate isomerase in complex with D-tagatose-6-phosphate
Descriptor: 6-O-phosphono-D-tagatose, Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
Authors:Jung, W.S, Pan, C.H.
Deposit date:2013-06-27
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
4LL7
DownloadVisualize
BU of 4ll7 by Molmil
Structure of She3p amino terminus.
Descriptor: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DYSPROSIUM ION, ...
Authors:Shi, H, Singh, N, Esselborn, F, Blobel, G.
Deposit date:2013-07-09
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structure of a myosinbulletadaptor complex and pairing by cargo.
Proc.Natl.Acad.Sci.USA, 111, 2014
4LFN
DownloadVisualize
BU of 4lfn by Molmil
Crystal Structure of D-galactose-6-phosphate isomerase in complex with D-ribulose
Descriptor: D-ribulose, Galactose-6-phosphate isomerase subunit A, Galactose-6-phosphate isomerase subunit B
Authors:Jung, W.S, Pan, C.H.
Deposit date:2013-06-27
Release date:2013-11-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and substrate specificity of D-galactose-6-phosphate isomerase complexed with substrates.
Plos One, 8, 2013
5OCO
DownloadVisualize
BU of 5oco by Molmil
Discovery of small molecules binding to KRAS via high affinity antibody fragment competition method.
Descriptor: CITRIC ACID, DI(HYDROXYETHYL)ETHER, GTPase KRas, ...
Authors:Cruz-Migoni, A, Ehebauer, M.T, Phillips, S.E.V, Quevedo, C.E, Rabbitts, T.H.
Deposit date:2017-07-03
Release date:2018-08-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Small molecule inhibitors of RAS-effector protein interactions derived using an intracellular antibody fragment.
Nat Commun, 9, 2018
3SJ2
DownloadVisualize
BU of 3sj2 by Molmil
A Crystal Structure of a Model of the Repeating r(CGG) Transcript Found in Fragile X Syndrome
Descriptor: ACETATE ION, RNA (5'-R(*UP*UP*GP*GP*GP*CP*CP*GP*GP*CP*GP*GP*CP*GP*GP*GP*UP*CP*C)-3'), RNA (5'-R(P*GP*GP*GP*CP*CP*GP*GP*CP*GP*GP*CP*GP*GP*GP*UP*CP*C)-3')
Authors:Kumar, A, Pengfei, F, Park, H, Nettles, K, Guo, M, Disney, M.D.
Deposit date:2011-06-20
Release date:2011-08-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A Crystal Structure of a Model of the Repeating r(CGG) Transcript Found in Fragile X Syndrome.
Chembiochem, 12, 2011

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon