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4DAC
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BU of 4dac by Molmil
Crystal Structure of Computationally Designed Protein P6d
Descriptor: Computationally designed crystal forming protein P6d
Authors:Lanci, C.J, MacDermaid, C.M, Saven, J.G.
Deposit date:2012-01-12
Release date:2012-05-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Computational design of a protein crystal.
Proc.Natl.Acad.Sci.USA, 109, 2012
4DAL
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BU of 4dal by Molmil
Crystal structure of Putative aldehyde dehydrogenase from Sinorhizobium meliloti 1021
Descriptor: GLYCEROL, Putative aldehyde dehydrogenase
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Seidel, R, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-01-12
Release date:2012-03-14
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of Putative aldehyde dehydrogenase from Sinorhizobium meliloti 1021
To be Published
4MDQ
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BU of 4mdq by Molmil
Structure of a novel submicromolar MDM2 inhibitor
Descriptor: 3-[(1R)-2-(benzylamino)-1-{[(2S)-1-(hydroxyamino)-4-methyl-1-oxopentan-2-yl]amino}-2-oxoethyl]-6-chloro-N-hydroxy-1H-indole-2-carboxamide, E3 ubiquitin-protein ligase Mdm2
Authors:Bista, M, Popowicz, G, Holak, T.A.
Deposit date:2013-08-23
Release date:2013-11-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:Transient Protein States in Designing Inhibitors of the MDM2-p53 Interaction.
Structure, 21, 2013
4MCI
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BU of 4mci by Molmil
Crystal structure of uridine phosphorylase from vibrio fischeri es114 complexed with DMSO, NYSGRC Target 029520.
Descriptor: DIMETHYL SULFOXIDE, SULFATE ION, Uridine phosphorylase
Authors:Malashkevich, V.N, Bhosle, R, Toro, R, Hillerich, B, Gizzi, A, Garforth, S, Kar, A, Chan, M.K, Lafluer, J, Patel, H, Matikainen, B, Chamala, S, Lim, S, Celikgil, A, Villegas, G, Evans, B, Love, J, Fiser, A, Khafizov, K, Seidel, R, Bonanno, J.B, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-08-21
Release date:2013-09-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal structure of uridine phosphorylase from vibrio fischeri es114 complexed with DMSO, NYSGRC Target 029520.
To be Published
4MDW
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BU of 4mdw by Molmil
Crystal structure of a DUF1541 family protein (ydhK) from Bacillus subtilis subsp. subtilis str. 168 at 2.00 A resolution
Descriptor: Uncharacterized protein YdhK
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2013-08-23
Release date:2013-10-02
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a hypothetical protein (ydhK) from Bacillus subtilis subsp. subtilis str. 168 at 2.00 A resolution
To be published
4DTW
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BU of 4dtw by Molmil
cytochrome P450 BM3h-8C8 MRI sensor bound to serotonin
Descriptor: Cytochrome P450 BM3 variant 8C8, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H.
Deposit date:2012-02-21
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin.
J.Mol.Biol., 422, 2012
4MEV
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BU of 4mev by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), Target EFI-510211, with bound malonate, space group I422
Descriptor: CITRIC ACID, MALONATE ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Zhao, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-27
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4DDY
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BU of 4ddy by Molmil
CTX-M-9 class A beta-lactamase complexed with compound 10
Descriptor: Beta-lactamase, DIMETHYL SULFOXIDE, N-[3-(1H-tetrazol-5-yl)phenyl]-3-(trifluoromethyl)benzamide
Authors:Nichols, D.A, Chen, Y.
Deposit date:2012-01-19
Release date:2012-03-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure-Based Design of Potent and Ligand-Efficient Inhibitors of CTX-M Class A Beta-Lactamase
J.Med.Chem., 55, 2012
4MCV
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BU of 4mcv by Molmil
Star 12 bound to analog-sensitive Src kinase
Descriptor: (7S)-12-(4-aminobutyl)-7-(2-methylpropyl)-6,7,12,13-tetrahydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazol-5-one, Proto-oncogene tyrosine-protein kinase Src
Authors:Lopez, M.S, Shokat, K.M.
Deposit date:2013-08-21
Release date:2013-11-20
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Staurosporine-derived inhibitors broaden the scope of analog-sensitive kinase technology.
J.Am.Chem.Soc., 135, 2013
4MFA
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BU of 4mfa by Molmil
Structure of human DNA polymerase beta complexed with nicked DNA containing a mismatched template O6MG and incoming TTP
Descriptor: DNA polymerase beta, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Koag, M.C, Min, K, Monzingo, A.F, Lee, S.
Deposit date:2013-08-27
Release date:2014-08-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structures of human DNA polymerase beta inserting bases opposite templating O6MG
To be Published
3GO7
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BU of 3go7 by Molmil
Crystal Structure of M. tuberculosis ribokinase (Rv2436) in complex with ribose
Descriptor: MAGNESIUM ION, RIBOKINASE RBSK, alpha-D-ribofuranose
Authors:Masters, E.I, Sun, Y, Wang, Y, Parker, W.B, Li, R.
Deposit date:2009-03-18
Release date:2010-03-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and biochemical characterization of M.tuberculosis ribokinase (Rv2436)
To be Published
4DUA
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BU of 4dua by Molmil
cytochrome P450 BM3h-9D7 MRI sensor, no ligand
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, TRIETHYLENE GLYCOL, cytochrome P450 BM3 variant 9D7
Authors:Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H.
Deposit date:2012-02-21
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin.
J.Mol.Biol., 422, 2012
4DFL
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BU of 4dfl by Molmil
Crystal structure of spleen tyrosine kinase complexed with a sulfonamidopyrazine piperidine inhibitor
Descriptor: 1,2-ETHANEDIOL, 3-amino-6-{3-[(methylsulfonyl)amino]phenyl}-N-(piperidin-4-ylmethyl)pyrazine-2-carboxamide, SULFATE ION, ...
Authors:Lopez, M, Segarra, V, Vidal, B, Wenzkowski, C, Jestel, A, Krapp, S, Blaesse, M, Nagel, S, Schreiner, P.
Deposit date:2012-01-24
Release date:2012-04-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Pyrazine-based Syk kinase inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
4DV1
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BU of 4dv1 by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U20G, bound with streptomycin
Descriptor: 16S rRNA, MAGNESIUM ION, STREPTOMYCIN, ...
Authors:Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2012-02-22
Release date:2013-02-27
Last modified:2025-02-19
Method:X-RAY DIFFRACTION (3.849 Å)
Cite:A structural basis for streptomycin resistance
To be Published
4DGE
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BU of 4dge by Molmil
TRIMCyp cyclophilin domain from Macaca mulatta: H70C mutant, HIV-1 CA(O-loop) complex
Descriptor: TRIMCyp, capsid protein
Authors:Caines, M.E.C, Bichel, K, Price, A.J, McEwan, W.A, James, L.C.
Deposit date:2012-01-25
Release date:2012-02-08
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Diverse HIV viruses are targeted by a conformationally dynamic antiviral.
Nat.Struct.Mol.Biol., 19, 2012
4ME5
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BU of 4me5 by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS V23S/V66A at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Caro, J.A, Schlessman, J.L, Garcia-Moreno E, B.
Deposit date:2013-08-25
Release date:2013-10-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cavities in proteins
To be Published
4DXH
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BU of 4dxh by Molmil
Horse liver alcohol dehydrogenase complexed with NAD+ and 2,2,2-trifluoroethanol
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
Authors:Plapp, B.V, Ramaswamy, S.
Deposit date:2012-02-27
Release date:2012-04-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Atomic-Resolution Structures of Horse Liver Alcohol Dehydrogenase with NAD(+) and Fluoroalcohols Define Strained Michaelis Complexes.
Biochemistry, 51, 2012
4DK7
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BU of 4dk7 by Molmil
Crystal structure of LXR ligand binding domain in complex with full agonist 1
Descriptor: ACETATE ION, CALCIUM ION, N-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-N-methylbenzenesulfonamide, ...
Authors:Piper, D.E, Xu, H.
Deposit date:2012-02-03
Release date:2012-03-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Discovery of a new binding mode for a series of liver X receptor agonists.
Bioorg.Med.Chem.Lett., 22, 2012
4MI0
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BU of 4mi0 by Molmil
Human Enhancer of Zeste (Drosophila) Homolog 2(EZH2)
Descriptor: Histone-lysine N-methyltransferase EZH2, UNKNOWN ATOM OR ION, ZINC ION
Authors:Dong, A, Zeng, H, He, H, Wernimont, A, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Wu, H, Structural Genomics Consortium (SGC)
Deposit date:2013-08-30
Release date:2013-09-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the catalytic domain of EZH2 reveals conformational plasticity in cofactor and substrate binding sites and explains oncogenic mutations.
Plos One, 8, 2013
4DL0
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BU of 4dl0 by Molmil
Crystal Structure of the heterotrimeric EGChead Peripheral Stalk Complex of the Yeast Vacuolar ATPase
Descriptor: SULFATE ION, TRIMETHYL LEAD ION, V-type proton ATPase subunit C, ...
Authors:Oot, R.A, Huang, L.S, Berry, E.A, Wilkens, S.
Deposit date:2012-02-05
Release date:2012-10-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.905 Å)
Cite:Crystal Structure of the Yeast Vacuolar ATPase Heterotrimeric EGC(head) Peripheral Stalk Complex.
Structure, 20, 2012
4DLW
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BU of 4dlw by Molmil
H-Ras Set 2 Ca(OAc)2/DTT, on
Descriptor: ACETATE ION, CALCIUM ION, GTPase HRas, ...
Authors:Holzapfel, G, Mattos, C.
Deposit date:2012-02-06
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition.
Biochemistry, 51, 2012
4LOG
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BU of 4log by Molmil
The crystal structure of the orphan nuclear receptor PNR ligand binding domain fused with MBP
Descriptor: Maltose ABC transporter periplasmic protein and NR2E3 protein chimeric construct
Authors:Tan, M.E, Zhou, X.E, Soon, F.-F, Li, X, Li, J, Yong, E.-L, Melcher, K, Xu, H.E.
Deposit date:2013-07-12
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The Crystal Structure of the Orphan Nuclear Receptor NR2E3/PNR Ligand Binding Domain Reveals a Dimeric Auto-Repressed Conformation.
Plos One, 8, 2013
4DYE
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BU of 4dye by Molmil
Crystal structure of an enolase (putative sugar isomerase, target efi-502095) from streptomyces coelicolor, no mg, ordered loop
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, isomerase
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2012-02-28
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of an enolase (putative sugar isomerase, target efi-502095) from streptomyces coelicolor, no mg, ordered loop
to be published
4DYZ
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BU of 4dyz by Molmil
Crystal Structure of the apo form of Human H-Ferritin variant MIC1
Descriptor: CALCIUM ION, COPPER (II) ION, Ferritin heavy chain
Authors:Tezcan, F.A, Huard, D.J.E.
Deposit date:2012-02-29
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Re-engineering protein interfaces yields copper-inducible ferritin cage assembly.
Nat.Chem.Biol., 9, 2013
4DZ4
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BU of 4dz4 by Molmil
X-ray crystal structure of a hypothetical Agmatinase from Burkholderia thailandensis
Descriptor: 1,2-ETHANEDIOL, Agmatinase, MANGANESE (II) ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-02-29
Release date:2012-03-28
Last modified:2025-02-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Combining functional and structural genomics to sample the essential Burkholderia structome.
Plos One, 8, 2013

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