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6TO9
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BU of 6to9 by Molmil
Crystal structure of the oligomerisation domain of the transcription factor PHOSPHATE STARVATION RESPONSE 1 from Arabidopsis (crystal form 2)
Descriptor: MAGNESIUM ION, Protein PHOSPHATE STARVATION RESPONSE 1
Authors:Hothorn, M.
Deposit date:2019-12-11
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Inositol pyrophosphates promote the interaction of SPX domains with the coiled-coil motif of PHR transcription factors to regulate plant phosphate homeostasis.
Nat Commun, 12, 2021
7ZH4
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BU of 7zh4 by Molmil
USP1 bound to ML323 and ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: 5-methyl-2-(2-propan-2-ylphenyl)-~{N}-[[4-(1,2,3-triazol-1-yl)phenyl]methyl]pyrimidin-4-amine, Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ...
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
5XNS
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BU of 5xns by Molmil
Crystal structure of the Smc head domain with an extended coiled coil bound to the C-terminal domain of ScpA derived from Pyrococcus furiosus
Descriptor: CITRIC ACID, Chromosome partition protein Smc, Segregation and condensation protein A
Authors:Kwak, M.-J, Shin, H.-C, Oh, B.-H.
Deposit date:2017-05-24
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structure of Full-Length SMC and Rearrangements Required for Chromosome Organization
Mol. Cell, 67, 2017
4NRI
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BU of 4nri by Molmil
Crystal Structure of a human Mms2/Ubc13 A122G mutant
Descriptor: GLYCEROL, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2
Authors:Hodge, C.D, Edwards, R.A, Glover, J.N.M.
Deposit date:2013-11-26
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Stochastic gate dynamics regulate the catalytic activity of ubiquitination enzymes.
J.Am.Chem.Soc., 136, 2014
4N1U
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BU of 4n1u by Molmil
Structure of human MTH1 in complex with TH588
Descriptor: 7,8-dihydro-8-oxoguanine triphosphatase, N~4~-cyclopropyl-6-(2,3-dichlorophenyl)pyrimidine-2,4-diamine, SULFATE ION
Authors:Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
Deposit date:2013-10-04
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
1PVO
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BU of 1pvo by Molmil
X-ray crystal structure of Rho transcription termination factor in complex with ssRNA substrate and ANPPNP
Descriptor: 5'-R(P*UP*C)-3', PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Transcription termination factor rho
Authors:Skordalakes, E, Berger, J.M.
Deposit date:2003-06-27
Release date:2003-07-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Rho transcription terminator: mechanism of mRNA recognition and helicase loading
Cell(Cambridge,Mass.), 114, 2003
3S1S
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BU of 3s1s by Molmil
Characterization and crystal structure of the type IIG restriction endonuclease BpuSI
Descriptor: 1,2-ETHANEDIOL, IODIDE ION, MANGANESE (II) ION, ...
Authors:Shen, B.W, Xu, D, Chan, S.-H, Zheng, Y, Zhu, Y, Xu, S.-Y, Stoddard, B.L.
Deposit date:2011-05-16
Release date:2011-07-13
Last modified:2011-10-19
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Characterization and crystal structure of the type IIG restriction endonuclease RM.BpuSI.
Nucleic Acids Res., 39, 2011
1D8B
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BU of 1d8b by Molmil
NMR STRUCTURE OF THE HRDC DOMAIN FROM SACCHAROMYCES CEREVISIAE RECQ HELICASE
Descriptor: SGS1 RECQ HELICASE
Authors:Liu, Z, Macias, M.J, Bottomley, M.J, Stier, G, Linge, J.P, Nilges, M, Bork, P, Sattler, M.
Deposit date:1999-10-21
Release date:2000-01-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The three-dimensional structure of the HRDC domain and implications for the Werner and Bloom syndrome proteins.
Structure Fold.Des., 7, 1999
1UST
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BU of 1ust by Molmil
YEAST HISTONE H1 GLOBULAR DOMAIN I, HHO1P GI, SOLUTION NMR STRUCTURES
Descriptor: HISTONE H1
Authors:Ali, T, Coles, P, Stevens, T.J, Stott, K, Thomas, J.O.
Deposit date:2003-11-30
Release date:2004-04-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two Homologous Domains of Similar Structure But Different Stability in the Yeast Linker Histone, Hho1P
J.Mol.Biol., 338, 2004
3PLW
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BU of 3plw by Molmil
Ref protein from P1 bacteriophage
Descriptor: Recombination enhancement function protein, SULFATE ION, ZINC ION
Authors:Keck, J.L, Lu, D, Cox, M.M.
Deposit date:2010-11-15
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Creating Directed Double-strand Breaks with the Ref Protein: A NOVEL RecA-DEPENDENT NUCLEASE FROM BACTERIOPHAGE P1.
J.Biol.Chem., 286, 2011
1USS
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BU of 1uss by Molmil
YEAST HISTONE H1 GLOBULAR DOMAIN II, HHO1P GII, SOLUTION NMR STRUCTURES
Descriptor: HISTONE H1
Authors:Ali, T, Coles, P, Stevens, T.J, Stott, K, Thomas, J.O.
Deposit date:2003-11-30
Release date:2004-04-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Two Homologous Domains of Similar Structure But Different Stability in the Yeast Linker Histone, Hho1P
J.Mol.Biol., 338, 2004
3DOM
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BU of 3dom by Molmil
Crystal Structure of the complex between Tfb5 and the C-terminal domain of Tfb2
Descriptor: RNA polymerase II transcription factor B subunit 2, RNA polymerase II transcription factor B subunit 5
Authors:Kainov, D.E, Cavarelli, J, Egly, J.M, Poterszman, A.
Deposit date:2008-07-04
Release date:2008-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for group A trichothiodystrophy
Nat.Struct.Mol.Biol., 15, 2008
2WMM
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BU of 2wmm by Molmil
Crystal structure of the hinge domain of MukB
Descriptor: Chromosome partition protein MukB, D-MALATE
Authors:Ku, B, Oh, B.-H.
Deposit date:2009-07-01
Release date:2010-01-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the MukB hinge domain with coiled-coil stretches and its functional implications.
Proteins, 78, 2010
5VF0
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BU of 5vf0 by Molmil
Solution NMR structure of human RAD18 (198-240) in complex with ubiquitin
Descriptor: E3 ubiquitin-protein ligase RAD18, Polyubiquitin-B, ZINC ION
Authors:Hu, Q, Botuyan, M.V, Mer, G.
Deposit date:2017-04-06
Release date:2017-05-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Mol. Cell, 66, 2017
1LJP
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BU of 1ljp by Molmil
Crystal Structure of beta-Cinnamomin Elicitin
Descriptor: Beta-elicitin cinnamomin
Authors:Rodrigues, M.L, Archer, M, Martel, P, Jacquet, A, Cravador, A, Carrondo, M.A.
Deposit date:2002-04-22
Release date:2002-07-31
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of beta-cinnamomin, a protein toxic to some plant species.
Acta Crystallogr.,Sect.D, 58, 2002
1LWE
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BU of 1lwe by Molmil
CRYSTAL STRUCTURE OF M41L/T215Y MUTANT HIV-1 REVERSE TRANSCRIPTASE (RTMN) IN COMPLEX WITH NEVIRAPINE
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE, PHOSPHATE ION
Authors:Ren, J, Chamberlain, P.P, Nichols, C.E, Douglas, L, Stuart, D.I, Stammers, D.K.
Deposit date:2002-05-31
Release date:2002-10-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Crystal structures of Zidovudine- or Lamivudine-resistant human immunodeficiency virus type 1 reverse transcriptases containing mutations at codons 41, 184, and 215.
J.Virol., 76, 2002
1LWC
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BU of 1lwc by Molmil
CRYSTAL STRUCTURE OF M184V MUTANT HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH NEVIRAPINE
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, HIV-1 REVERSE TRANSCRIPTASE, PHOSPHATE ION
Authors:Ren, J, Chamberlain, P.P, Nichols, C.E, Douglas, L, Stuart, D.I, Stammers, D.K.
Deposit date:2002-05-31
Release date:2002-10-30
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Crystal structures of Zidovudine- or Lamivudine-resistant human immunodeficiency virus type 1 reverse transcriptases containing mutations at codons 41, 184, and 215.
J.Virol., 76, 2002
1N1Q
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BU of 1n1q by Molmil
Crystal structure of a Dps protein from Bacillus brevis
Descriptor: DPS Protein, MU-OXO-DIIRON
Authors:Ren, B, Tibbelin, G, Kajino, T, Asami, O, Ladenstein, R.
Deposit date:2002-10-19
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Multi-layered Structure of Dps with a Novel Di-nuclear Ferroxidase Center
J.Mol.Biol., 329, 2003
5LMF
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BU of 5lmf by Molmil
Structure of C-terminal domain from S. cerevisiae Pat1 decapping activator bound to Dcp2 HLM3 peptide (region 484-500)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DNA topoisomerase 2-associated protein PAT1, ...
Authors:Charenton, C, Gaudon-Plesse, C, Fourati, Z, Taverniti, V, Back, R, Kolesnikova, O, Seraphin, B, Graille, M.
Deposit date:2016-07-30
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:A unique surface on Pat1 C-terminal domain directly interacts with Dcp2 decapping enzyme and Xrn1 5'-3' mRNA exonuclease in yeast.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MEC
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BU of 5mec by Molmil
Crystal structure of yeast Cdt1 middle domain (residues 294-433)
Descriptor: Cell division cycle protein CDT1
Authors:Pye, V.E, Frigola, J, Diffley, J.F.X, Cherepanov, P.
Deposit date:2016-11-14
Release date:2017-05-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Cdt1 stabilizes an open MCM ring for helicase loading.
Nat Commun, 8, 2017
5MEA
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BU of 5mea by Molmil
Crystal structure of yeast Cdt1 (N terminal and middle domain), form 2.
Descriptor: Cell division cycle protein CDT1, GLYCEROL, SULFATE ION
Authors:Pye, V.E, Frigola, J, Diffley, J.F.X, Cherepanov, P.
Deposit date:2016-11-14
Release date:2017-05-17
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.152 Å)
Cite:Cdt1 stabilizes an open MCM ring for helicase loading.
Nat Commun, 8, 2017
5MEB
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BU of 5meb by Molmil
Crystal structure of yeast Cdt1 C-terminal domain
Descriptor: Cell division cycle protein CDT1, SULFATE ION
Authors:Pye, V.E, Frigola, J, Diffley, J.F.X, Cherepanov, P.
Deposit date:2016-11-14
Release date:2017-05-17
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cdt1 stabilizes an open MCM ring for helicase loading.
Nat Commun, 8, 2017
2M1G
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BU of 2m1g by Molmil
Parallel human telomeric quadruplex containing 2'F-ANA substitutions
Descriptor: 5'-D(*TP*AP*GP*GP*GP*TP*TP*AP*(GFL)P*GP*GP*T)-3'
Authors:Martin-Pintado, N, Yahyaee-Anzahaee, M, Deleavey, G.F, Portella, G, Orozco, M, Damha, M.J, Gonzalez, C.
Deposit date:2012-11-27
Release date:2013-05-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Dramatic effect of furanose c2' substitution on structure and stability: directing the folding of the human telomeric quadruplex with a single fluorine atom.
J.Am.Chem.Soc., 135, 2013
5ME9
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BU of 5me9 by Molmil
Crystal structure of yeast Cdt1 (N terminal and middle domain), form 1.
Descriptor: Cell division cycle protein CDT1, GLYCEROL, SULFATE ION
Authors:Pye, V.E, Frigola, J, Diffley, J.F.X, Cherepanov, P.
Deposit date:2016-11-14
Release date:2017-05-17
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Cdt1 stabilizes an open MCM ring for helicase loading.
Nat Commun, 8, 2017
6Q1H
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BU of 6q1h by Molmil
Structure of P. aeruginosa ATCC27853 NucC, cAAA-bound form
Descriptor: Bacterial protein ORF C62, RNA (5'-R(P*AP*AP*A)-3')
Authors:Ye, Q, Lau, R.K, Corbett, K.D.
Deposit date:2019-08-04
Release date:2019-12-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure and Mechanism of a Cyclic Trinucleotide-Activated Bacterial Endonuclease Mediating Bacteriophage Immunity.
Mol.Cell, 77, 2020

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