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8QW2
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BU of 8qw2 by Molmil
Human NDPK-C in complex with UDP and Mg2+
Descriptor: MAGNESIUM ION, Nucleoside diphosphate kinase 3, URIDINE-5'-DIPHOSPHATE
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QW0
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BU of 8qw0 by Molmil
Human NDPK-C in complex with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase 3, SULFATE ION
Authors:Werten, S, Amjadi, R, Scheffzek, K.
Deposit date:2023-10-18
Release date:2024-09-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.175 Å)
Cite:Mechanistic Insights into Substrate Recognition of Human Nucleoside Diphosphate Kinase C Based on Nucleotide-Induced Structural Changes.
Int J Mol Sci, 25, 2024
8QP6
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BU of 8qp6 by Molmil
Crystal structure of Hepatitis C Virus E1 glycoprotein epitope 314-324 scaffold design 1W4K_08 in complex with neutralizing antibody F(ab) fragment IGH526
Descriptor: 1W4K_08, F(ab) IGH526
Authors:Nagarathinam, K, Krey, T.
Deposit date:2023-09-30
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of Hepatitis C Virus E1 glycoprotein epitope 314-324 scaffold design 1W4K_08 in complex with neutralizing antibody F(ab) fragment IGH526
To Be Published
8R0C
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BU of 8r0c by Molmil
Crystal structure of Borneoldehydrogenase ancestor N32
Descriptor: Borneoldehydrogenase, GLYCEROL
Authors:Helmer, C.P.O, Dimos, N, Loll, B.
Deposit date:2023-10-31
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Crystal structure of Borneoldehydrogenase N32
To Be Published
8QPQ
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BU of 8qpq by Molmil
C1 turret to capsid interface of full Haloferax tailed virus 1 adjacent to the portal-capsid interface.
Descriptor: HK97 gp5-like major capsid protein, MAGNESIUM ION, Prokaryotic polysaccharide deacetylase, ...
Authors:Zhang, D, Daum, B, Isupov, M.N, McLaren, M.
Deposit date:2023-10-02
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:CryoEM structure of Haloferax tailed virus 1
To Be Published
6SKO
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BU of 6sko by Molmil
Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork - conformation 2 MCM CTD:ssDNA
Descriptor: DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, DNA replication licensing factor MCM4, ...
Authors:Yeeles, J, Baretic, D, Jenkyn-Bedford, M.
Deposit date:2019-08-16
Release date:2020-05-06
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM Structure of the Fork Protection Complex Bound to CMG at a Replication Fork.
Mol.Cell, 78, 2020
8QWE
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BU of 8qwe by Molmil
Ternary complex of ReChb - crRNA - target dsDNA
Descriptor: MAGNESIUM ION, ReChb, crRNA, ...
Authors:Lopez-Alonso, J.P, Ubarretxena-Belandia, I, Tascon, I.
Deposit date:2023-10-19
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:A resurrected ancestor of Cas12a expands target access and substrate 2 recognition for nucleic-acid editing and detection
Nature Biotechnology, 2024
6SKN
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BU of 6skn by Molmil
Structure of the native full-length HIV-1 capsid protein in helical assembly (-13,8)
Descriptor: Gag protein
Authors:Ni, T, Gerard, S, Zhao, G, Ning, J, Zhang, P.
Deposit date:2019-08-16
Release date:2020-08-26
Last modified:2022-03-30
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Intrinsic curvature of the HIV-1 CA hexamer underlies capsid topology and interaction with cyclophilin A.
Nat.Struct.Mol.Biol., 27, 2020
8OHZ
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BU of 8ohz by Molmil
Yeast 20S proteasome in complex with a photoswitchable cepafungin derivative (transCep1)
Descriptor: (2~{S},3~{R})-2-[2-[4-[2-(4-ethylphenyl)hydrazinyl]phenyl]ethanoylamino]-~{N}-[(5~{S},8~{S},10~{S})-5-methyl-10-oxidanyl-2,7-bis(oxidanylidene)-1,6-diazacyclododec-8-yl]-3-oxidanyl-butanamide, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Morstein, J, Amatuni, A, Schuster, A, Kuttenlochner, W, Ko, T, Groll, M, Adibekian, A, Renata, H, Trauner, D.H.
Deposit date:2023-03-21
Release date:2023-12-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Optical Control of Proteasomal Protein Degradation with a Photoswitchable Lipopeptide.
Angew.Chem.Int.Ed.Engl., 63, 2024
8QBX
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BU of 8qbx by Molmil
Chimeric Adenovirus-derived dodecamer
Descriptor: Penton protein
Authors:Buzas, D, Borucu, U, Bufton, J, Kapadalakere, S.Y, Toelzer, C.
Deposit date:2023-08-25
Release date:2023-12-27
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Engineering the ADDobody protein scaffold for generation of high-avidity ADDomer super-binders.
Structure, 32, 2024
8Q7Y
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BU of 8q7y by Molmil
ESIBD structure of beta-galactosidase
Descriptor: Beta-galactosidase
Authors:Esser, T, Boehning, J, Bharat, T.A.M, Rauschenbach, S.
Deposit date:2023-08-17
Release date:2024-01-10
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM of soft-landed beta-galactosidase: Gas-phase and native structures are remarkably similar.
Sci Adv, 10, 2024
8QCF
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BU of 8qcf by Molmil
yeast cytoplasmic exosome-Ski2 complex degrading a RNA substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Antiviral helicase SKI2, Exosome complex component CSL4, ...
Authors:Keidel, A, Koegel, A, Reichelt, P, Kowalinski, E, Schaefer, I.B, Conti, E.
Deposit date:2023-08-25
Release date:2024-01-10
Method:ELECTRON MICROSCOPY (2.55 Å)
Cite:Concerted structural rearrangements enable RNA channeling into the cytoplasmic Ski238-Ski7-exosome assembly.
Mol.Cell, 83, 2023
6SJJ
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BU of 6sjj by Molmil
A new modulated crystal structure of ANS complex of St John's wort Hyp-1 protein with 36 protein molecules in the asymmetric unit of the supercell
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-ANILINO-1-NAPHTHALENE SULFONATE, CITRATE ANION, ...
Authors:Smietanska, J, Sliwiak, J, Gilski, M, Dauter, Z, Strzalka, R, Wolny, J, Jaskolski, M.
Deposit date:2019-08-13
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A new modulated crystal structure of the ANS complex of the St John's wort Hyp-1 protein with 36 protein molecules in the asymmetric unit of the supercell.
Acta Crystallogr D Struct Biol, 76, 2020
8QY9
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BU of 8qy9 by Molmil
J22.9-H, fully humanized Fab Fragment based on chimeric J22.9-xi IgG against BCMA
Descriptor: COPPER (II) ION, Fab heavy chain of J22.9-H, Fab light chain of J22.9-H, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-based humanization of a therapeutic antibody for multiple myeloma.
J.Mol.Med., 102, 2024
6SKP
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BU of 6skp by Molmil
OXA-10_IPM. Structural insight to the enhanced carbapenem efficiency of OXA-655 compared to OXA-10.
Descriptor: (5R)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-3-[(2-{[(E)-iminomethyl]amino}ethyl)sulfanyl]-4,5-dihydro-1H-pyrrole-2-carbox ylic acid, Beta-lactamase, SODIUM ION, ...
Authors:Leiros, H.-K.S.
Deposit date:2019-08-16
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.891 Å)
Cite:Structural insights into the enhanced carbapenemase efficiency of OXA-655 compared to OXA-10.
Febs Open Bio, 10, 2020
8QYB
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BU of 8qyb by Molmil
J22.9-ISY, fully humanized and CDR optimized Fab Fragment based on chimeric J22.9-xi IgG against BCMA
Descriptor: COPPER (II) ION, Fab heavy chain of J22.9-ISY, Fab light chain of J22.9-ISY, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structure-based humanization of a therapeutic antibody for multiple myeloma.
J.Mol.Med., 102, 2024
6SZI
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BU of 6szi by Molmil
ASR Alternansucrase in complex with isomaltose
Descriptor: Alternansucrase, CALCIUM ION, alpha-D-glucopyranose-(1-6)-alpha-D-glucopyranose
Authors:Cioci, G, Molina, M, Moulis, C, Remaud-Simeon, M.
Deposit date:2019-10-02
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:A specific oligosaccharide-binding site in the alternansucrase catalytic domain mediates alternan elongation.
J.Biol.Chem., 295, 2020
6S8O
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BU of 6s8o by Molmil
Human Brr2 Helicase Region M641C/A1582C
Descriptor: U5 small nuclear ribonucleoprotein 200 kDa helicase
Authors:Vester, K, Santos, K.F, Wahl, M.C.
Deposit date:2019-07-10
Release date:2020-01-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.172 Å)
Cite:The inactive C-terminal cassette of the dual-cassette RNA helicase BRR2 both stimulates and inhibits the activity of the N-terminal helicase unit.
J.Biol.Chem., 295, 2020
6T16
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BU of 6t16 by Molmil
ASR Alternansucrase in complex with panose
Descriptor: Alternansucrase, CALCIUM ION, alpha-D-glucopyranose, ...
Authors:Cioci, G, Molina, M, Moulis, C, Remaud-Simeon, M.
Deposit date:2019-10-03
Release date:2020-06-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A specific oligosaccharide-binding site in the alternansucrase catalytic domain mediates alternan elongation.
J.Biol.Chem., 295, 2020
8QJS
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BU of 8qjs by Molmil
VHL/Elongin B/Elongin C complex with compound 155
Descriptor: (2S,4R)-1-[(2R)-2-[3-[2-(2-methoxyethoxy)ethoxy]-1,2-oxazol-5-yl]-3-methyl-butanoyl]-N-[(1S)-1-[4-(4-methyl-1,3-thiazol-5-yl)phenyl]ethyl]-4-oxidanyl-pyrrolidine-2-carboxamide, Elongin-B, Elongin-C, ...
Authors:Kerry, P.S, Hole, A.J, Perez-Dorado, J.I.
Deposit date:2023-09-13
Release date:2024-01-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.191 Å)
Cite:PROTACs Targeting BRM (SMARCA2) Afford Selective In Vivo Degradation over BRG1 (SMARCA4) and Are Active in BRG1 Mutant Xenograft Tumor Models.
J.Med.Chem., 67, 2024
6SKR
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BU of 6skr by Molmil
OXA-10_ETP. Structural insight to the enhanced carbapenem efficiency of OXA-655 compared to OXA-10.
Descriptor: (4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase, FORMIC ACID, ...
Authors:Leiros, H.-K.S.
Deposit date:2019-08-16
Release date:2019-09-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insights into the enhanced carbapenemase efficiency of OXA-655 compared to OXA-10.
Febs Open Bio, 10, 2020
3QP3
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BU of 3qp3 by Molmil
Crystal structure of titin domain M4, tetragonal form
Descriptor: SULFATE ION, Titin
Authors:Sauer, F, Kolodziejczyk, A, Wilmanns, M.
Deposit date:2011-02-11
Release date:2012-02-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.997 Å)
Cite:Crystal structure of titin domain M4, tetragonal form
To be Published
6QXP
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BU of 6qxp by Molmil
Protein peptide complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat extensin-like protein 2, ...
Authors:Moussu, S, Caroline, C, Santos-Fernandez, G, Wehrle, S, Grossniklaus, U, Santiago, J.
Deposit date:2019-03-07
Release date:2020-03-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural basis for recognition of RALF peptides by LRX proteins during pollen tube growth.
Proc.Natl.Acad.Sci.USA, 117, 2020
6QWS
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BU of 6qws by Molmil
Crystal structure of the Ski2 RNA-helicase Brr2 from Chaetomium thermophilum in the apo state
Descriptor: Pre-mRNA splicing helicase-like protein, SULFATE ION
Authors:Absmeier, E, Santos, K.F, Wahl, M.C.
Deposit date:2019-03-06
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Molecular Mechanism Underlying Inhibition of Intrinsic ATPase Activity in a Ski2-like RNA Helicase.
Structure, 28, 2020
6QQ7
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BU of 6qq7 by Molmil
Bovine insulin at ambient pressure
Descriptor: Insulin
Authors:Kurpiewska, K, Milaczewska, A, Lewinski, K.
Deposit date:2019-02-18
Release date:2019-02-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insulin conformational changes under high pressure in structural studies and molecular dynamics simulations
J.Mol.Struct., 2020

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PDB entries from 2024-10-16

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