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8QUS
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Crystal structure of the Plasmodium vivax Apical membrane antigen (AMA1) in complex with single domain i-body WD34
Descriptor: Apical merozoite antigen 1, single domain i-body WD34
Authors:Maddumage, J.C, Kvansakul, M.
Deposit date:2023-10-17
Release date:2024-07-03
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:A broadly cross-reactive i-body to AMA1 potently inhibits blood and liver stages of Plasmodium parasites.
Nat Commun, 15, 2024
8BFI
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BU of 8bfi by Molmil
human CNOT1-CNOT10-CNOT11 module
Descriptor: CCR4-NOT transcription complex subunit 1, CCR4-NOT transcription complex subunit 10, CCR4-NOT transcription complex subunit 11
Authors:Basquin, J, Ozgur, S, Conti, E.
Deposit date:2022-10-26
Release date:2022-12-28
Last modified:2023-02-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions.
Cell Rep, 42, 2023
8BFH
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CNOT11
Descriptor: CCR4-NOT transcription complex subunit 11
Authors:Basquin, J, Ozgur, S, Conti, E.
Deposit date:2022-10-26
Release date:2022-12-28
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The human CNOT1-CNOT10-CNOT11 complex forms a structural platform for protein-protein interactions.
Cell Rep, 42, 2023
1DQG
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BU of 1dqg by Molmil
CRYSTAL STRUCTURE OF THE CYSTEINE RICH DOMAIN OF MANNOSE RECEPTOR
Descriptor: MANNOSE RECEPTOR, SULFATE ION
Authors:Liu, Y, Chirino, A.J, Misulovin, Z, Leteux, C, Feizi, T, Nussenzweig, M.C, Bjorkman, P.J.
Deposit date:2000-01-04
Release date:2000-05-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the cysteine-rich domain of mannose receptor complexed with a sulfated carbohydrate ligand.
J.Exp.Med., 191, 2000
8QU7
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BU of 8qu7 by Molmil
Crystal structure of the Plasmodium falciparum Apical membrane antigen (AMA1) in complex with single domain i-body WD34
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Apical membrane antigen 1, ...
Authors:Maddumage, J.C, Kvansakul, M.
Deposit date:2023-10-14
Release date:2024-07-03
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A broadly cross-reactive i-body to AMA1 potently inhibits blood and liver stages of Plasmodium parasites.
Nat Commun, 15, 2024
8R17
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BU of 8r17 by Molmil
Crystal structure of Neurospora crassa NADase with modified C-terminus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Conidial surface nicotinamide adenine dinucleotide glycohydrolase,Conidial surface nicotinamide adenine dinucleotide glycohydrolase nadA, ...
Authors:Kallio, J.P, Ferrario, E, Ziegler, M.
Deposit date:2023-11-01
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evolution of fungal tuberculosis necrotizing toxin (TNT) domain-containing enzymes reveals divergent adaptations to enhance NAD cleavage.
Protein Sci., 33, 2024
1DQP
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CRYSTAL STRUCTURE OF GIARDIA GUANINE PHOSPHORIBOSYLTRANSFERASE COMPLEXED WITH IMMUCILLING
Descriptor: 1,4-DIDEOXY-1,4-IMINO-1-(S)-(9-DEAZAGUANIN-9-YL)-D-RIBITOL, GUANINE PHOSPHORIBOSYLTRANSFERASE, ISOPROPYL ALCOHOL
Authors:Shi, W, Munagala, N.R, Wang, C.C, Li, C.M, Tyler, P.C, Furneaux, R.H, Grubmeyer, C, Schramm, V.L, Almo, S.C.
Deposit date:2000-01-04
Release date:2000-07-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structures of Giardia lamblia guanine phosphoribosyltransferase at 1.75 A(,).
Biochemistry, 39, 2000
1DX6
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BU of 1dx6 by Molmil
STRUCTURE OF ACETYLCHOLINESTERASE COMPLEXED WITH (-)-GALANTHAMINE AT 2.3A RESOLUTION
Descriptor: (-)-GALANTHAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Greenblatt, H.M, Kryger, G, Lewis, T.T, Silman, I, Sussman, J.L.
Deposit date:1999-12-21
Release date:2000-01-02
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Acetylcholinesterase Complexed with (-)-Galanthamine at 2.3A Resolution
FEBS Lett., 463, 1999
8R15
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BU of 8r15 by Molmil
Crystal structure of Fusarium oxysporum NADase I
Descriptor: GLYCEROL, TNT domain-containing protein, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Kallio, J.P, Ferrario, E, Stromland, O, Ziegler, M.
Deposit date:2023-11-01
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Evolution of fungal tuberculosis necrotizing toxin (TNT) domain-containing enzymes reveals divergent adaptations to enhance NAD cleavage.
Protein Sci., 33, 2024
1DY4
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CBH1 IN COMPLEX WITH S-PROPRANOLOL
Descriptor: 1-(ISOPROPYLAMINO)-3-(1-NAPHTHYLOXY)-2-PROPANOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION, ...
Authors:Stahlberg, J, Henriksson, H, Divne, C, Isaksson, R, Pettersson, G, Johansson, G, Jones, T.A.
Deposit date:2000-01-26
Release date:2000-12-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Enantiomer Binding and Separation of a Common Beta-Blocker: Crystal Structure of Cellobiohydrolase Cel7A with Bound (S)-Propranolol at 1.9 A Resolution
J.Mol.Biol., 305, 2001
8BBV
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BU of 8bbv by Molmil
Coproporphyrin III - LmCpfC complex soaked 2min with Fe2+
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Coproporphyrin III ferrochelatase, ...
Authors:Gabler, T, Hofbauer, S.
Deposit date:2022-10-14
Release date:2023-01-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Iron insertion into coproporphyrin III-ferrochelatase complex: Evidence for an intermediate distorted catalytic species.
Protein Sci., 32, 2023
1KKG
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BU of 1kkg by Molmil
NMR Structure of Ribosome-Binding Factor A (RbfA)
Descriptor: ribosome-binding factor A
Authors:Huang, Y.J, Swapna, G.V.T, Rajan, P.K, Ke, H, Xia, B, Shukla, K, Inouye, M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2001-12-07
Release date:2003-03-18
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR Structure of Ribosome-binding Factor A (RbfA), A Cold-shock Adaptation Protein from Escherichia coli
J.Mol.Biol., 327, 2003
1E0G
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BU of 1e0g by Molmil
LYSM Domain from E.coli MLTD
Descriptor: Membrane-bound lytic murein transglycosylase D
Authors:Bateman, A, Bycroft, M.
Deposit date:2000-03-27
Release date:2000-06-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of a Lysm Domain from E.Coli Membrane Bound Lytic Murein Transglycosylase D (Mltd)
J.Mol.Biol., 299, 2000
6SGA
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BU of 6sga by Molmil
Body domain of the mt-SSU assemblosome from Trypanosoma brucei
Descriptor: 9S rRNA, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N.
Deposit date:2019-08-03
Release date:2019-09-18
Last modified:2019-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
Science, 365, 2019
8GQU
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BU of 8gqu by Molmil
AK-42 inhibitor binding human ClC-2 TMD
Descriptor: 2-[[2,6-bis(chloranyl)-3-phenylmethoxy-phenyl]amino]pyridine-3-carboxylic acid, Chloride channel protein 2
Authors:Wang, L.
Deposit date:2022-08-30
Release date:2023-07-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM structures of ClC-2 chloride channel reveal the blocking mechanism of its specific inhibitor AK-42.
Nat Commun, 14, 2023
8OUI
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Complex of ASCT2 with Suppressyn
Descriptor: ALANINE, Neutral amino acid transporter B(0), Suppressyn
Authors:Khare, S, Kumar, A, Reyes, N.
Deposit date:2023-04-23
Release date:2024-05-01
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Receptor-recognition and antiviral mechanisms of retrovirus-derived human proteins.
Nat.Struct.Mol.Biol., 31, 2024
8OUH
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BU of 8ouh by Molmil
Complex of human ASCT2 with Syncytin-1
Descriptor: ALANINE, Neutral amino acid transporter B(0), Syncytin-1
Authors:Khare, S, Reyes, N.
Deposit date:2023-04-23
Release date:2024-05-01
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Receptor-recognition and antiviral mechanisms of retrovirus-derived human proteins.
Nat.Struct.Mol.Biol., 31, 2024
8OUD
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BU of 8oud by Molmil
Structure of the human neutral amino acid transporter ASCT2 in complex with nanobody 469
Descriptor: ALANINE, CHOLESTEROL HEMISUCCINATE, Nanobody 469, ...
Authors:Canul-Tec, J, Reyes, N.
Deposit date:2023-04-22
Release date:2024-05-01
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (2.31 Å)
Cite:Receptor-recognition and antiviral mechanisms of retrovirus-derived human proteins.
Nat.Struct.Mol.Biol., 31, 2024
1DPJ
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BU of 1dpj by Molmil
THE STRUCTURE OF PROTEINASE A COMPLEXED WITH IA3 PEPTIDE INHIBITOR
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTEINASE A, PROTEINASE INHIBITOR IA3 PEPTIDE, ...
Authors:Li, M, Phylip, H.L, Lees, W.E, Winther, J.R, Dunn, B.M, Wlodawer, A, Kay, J, Guschina, A.
Deposit date:1999-12-27
Release date:2000-05-03
Last modified:2021-07-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The aspartic proteinase from Saccharomyces cerevisiae folds its own inhibitor into a helix.
Nat.Struct.Biol., 7, 2000
8OVF
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BU of 8ovf by Molmil
Human Mitochondrial Lon Y186F Mutant ADP Bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Lon protease homolog, mitochondrial
Authors:Kereiche, S, Bauer, J.A, Matyas, P, Novacek, J, Kutejova, E.
Deposit date:2023-04-26
Release date:2024-05-08
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.23 Å)
Cite:Polyphosphate and tyrosine phosphorylation in the N-terminal domain of the human mitochondrial Lon protease disrupts its functions.
Sci Rep, 14, 2024
8QRG
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BU of 8qrg by Molmil
SARS-CoV-2 delta RBD complexed with XBB-2 Fab and NbC1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, NbC1, ...
Authors:Zhou, D, Ren, J, Stuart, D.I.
Deposit date:2023-10-07
Release date:2024-05-08
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A structure-function analysis shows SARS-CoV-2 BA.2.86 balances antibody escape and ACE2 affinity.
Cell Rep Med, 5, 2024
6R7Q
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BU of 6r7q by Molmil
Structure of XBP1u-paused ribosome nascent chain complex with Sec61.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shanmuganathan, V, Cheng, J, Braunger, K, Berninghausen, O, Beatrix, B, Beckmann, R.
Deposit date:2019-03-29
Release date:2019-07-10
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural and mutational analysis of the ribosome-arresting human XBP1u.
Elife, 8, 2019
8E1G
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BU of 8e1g by Molmil
SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2A10 Fab, heavy chain, ...
Authors:Wasserman, H, Hastie, K.M, Buck, T.K, Saphire, E.O.
Deposit date:2022-08-10
Release date:2023-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023
7R7J
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BU of 7r7j by Molmil
Crystal structure of RadD with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Putative DNA repair helicase RadD, ...
Authors:Osorio Garcia, M.A, Satyshur, K.A, Keck, J.L, Cox, M.M.
Deposit date:2021-06-24
Release date:2022-04-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:X-ray crystal structure of the Escherichia coli RadD DNA repair protein bound to ADP reveals a novel zinc ribbon domain.
Plos One, 17, 2022
7RI3
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Crystal structure of Albireti Toxin, a diphtheria toxin homolog, from Streptomyces albireticuli
Descriptor: ACETATE ION, CALCIUM ION, Diphtheria_T domain-containing protein, ...
Authors:Sugiman-Marangos, S.N, Gill, S.K, Melnyk, R.A.
Deposit date:2021-07-19
Release date:2022-04-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Structures of distant diphtheria toxin homologs reveal functional determinants of an evolutionarily conserved toxin scaffold.
Commun Biol, 5, 2022

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PDB entries from 2024-10-16

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