PDB: 53102 resultsInfo pagesStatus searchChemie searchBIRD

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6QK5	Solution Structure of the Zn-loaded form of a Metallothionein from Helix Pomatia Descriptor: Cadmium-metallothionein, ZINC ION Authors: Zerbe, O, Jurt, S, Beil, A. Deposit date: 2019-01-28 Release date: 2019-12-18 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: The Solution Structure and Dynamics of Cd-Metallothionein fromHelix pomatiaReveal Optimization for Binding Cd over Zn. Biochemistry, 58, 2019
8EON	Pseudomonas phage E217 baseplate complex Descriptor: Baseplate component gp33, Baseplate component gp34, Baseplate component gp36, ... Authors: Li, F, Cingolani, G, Hou, C. Deposit date: 2022-10-03 Release date: 2023-07-26 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217. Nat Commun, 14, 2023
8EVS	Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II Descriptor: 18S rRNA, 25S rRNA, 40S ribosomal protein S0-A, ... Authors: Zhao, Y, Rai, J, Li, H. Deposit date: 2022-10-20 Release date: 2023-09-06 Last modified: 2023-11-01 Method: ELECTRON MICROSCOPY (2.62 Å) Cite: Regulation of translation by ribosomal RNA pseudouridylation. Sci Adv, 9, 2023
6IAX	MloK1 model from single particle analysis of 2D crystals, class 1 (extended conformation) Descriptor: Cyclic nucleotide-gated potassium channel mll3241, POTASSIUM ION Authors: Righetto, R, Biyani, N, Kowal, J, Chami, M, Stahlberg, H. Deposit date: 2018-11-27 Release date: 2019-04-24 Last modified: 2024-05-15 Method: ELECTRON MICROSCOPY (5.2 Å) Cite: Retrieving high-resolution information from disordered 2D crystals by single-particle cryo-EM. Nat Commun, 10, 2019
8EYT	30S_delta_ksgA+KsgA complex Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... Authors: Sun, J, Kinman, L.F, Jahagirdar, D, Ortega, J, Davis, J.H. Deposit date: 2022-10-28 Release date: 2023-09-06 Last modified: 2023-11-15 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: KsgA facilitates ribosomal small subunit maturation by proofreading a key structural lesion. Nat.Struct.Mol.Biol., 30, 2023
7N8B	Cycloheximide bound vacant 80S structure isolated from cbf5-D95A Descriptor: 18S RIBOSOMAL RNA, 25S, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ... Authors: Rai, J, Zhao, Y, Li, H. Deposit date: 2021-06-14 Release date: 2022-05-11 Last modified: 2022-07-20 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: CryoEM structures of pseudouridine-free ribosome suggest impacts of chemical modifications on ribosome conformations. Structure, 30, 2022
6VNZ	NMR solution structure of tamapin, mutant K20A Descriptor: Potassium channel toxin alpha-KTx 5.4 Authors: del Rio Portilla, F, Melchor Meneses, C.M, Mayorga Flores, M. Deposit date: 2020-01-29 Release date: 2020-07-29 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Novel Blocker of Onco SK3 Channels Derived from Scorpion Toxin Tamapin and Active against Migration of Cancer Cells. Acs Med.Chem.Lett., 11, 2020
6VPN	Solution structure of antifungal plant defensin PvD1 Descriptor: Knot1 domain-containing protein Authors: Harvey, P.J. Deposit date: 2020-02-03 Release date: 2020-08-26 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Synthesis, Structure, and Activity of the Antifungal Plant DefensinPvD1. J.Med.Chem., 63, 2020
6QK6	Solution Structure of the Cd-loaded form of a Metallothionein from Helix Pomatia Descriptor: CADMIUM ION, Cadmium-metallothionein Authors: Zerbe, O, Jurt, S, Beil, A. Deposit date: 2019-01-28 Release date: 2019-12-18 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: The Solution Structure and Dynamics of Cd-Metallothionein fromHelix pomatiaReveal Optimization for Binding Cd over Zn. Biochemistry, 58, 2019
6WQE	Solution Structure of the IWP-051-bound H-NOX from Shewanella woodyi in the Fe(II)CO ligation state Descriptor: 5-fluoro-2-{1-[(2-fluorophenyl)methyl]-5-(1,2-oxazol-3-yl)-1H-pyrazol-3-yl}pyrimidin-4-ol, CARBON MONOXIDE, Heme NO binding domain protein, ... Authors: Chen, C.Y, Lee, W, Montfort, W.R. Deposit date: 2020-04-28 Release date: 2020-07-22 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Solution structures of the Shewanella woodyi H-NOX protein in the presence and absence of soluble guanylyl cyclase stimulator IWP-051. Protein Sci., 30, 2021
6QKQ	NMR solution structure of LSR2-T112D binding domain. Descriptor: Nucleoid-associated protein Lsr2 Authors: Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. Deposit date: 2019-01-30 Release date: 2019-07-17 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6QKP	NMR solution structure of LSR2 binding domain. Descriptor: Nucleoid-associated protein Lsr2 Authors: Barthe, P, Cohen-Gonsaud, M, Mukamolova, G.V. Deposit date: 2019-01-30 Release date: 2019-07-17 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Protein kinase B controls Mycobacterium tuberculosis growth via phosphorylation of the transcriptional regulator Lsr2 at threonine 112. Mol.Microbiol., 112, 2019
6QNO	Rhodopsin-Gi protein complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab antibody fragment heavy chain, Fab antibody fragment light chain, ... Authors: Tsai, C.-J, Marino, J, Adaixo, R.J, Pamula, F, Muehle, J, Maeda, S, Flock, T, Taylor, N.M.I, Mohammed, I, Matile, H, Dawson, R.J.P, Deupi, X, Stahlberg, H, Schertler, G.F.X. Deposit date: 2019-02-11 Release date: 2019-07-10 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (4.38 Å) Cite: Cryo-EM structure of the rhodopsin-G alpha i-beta gamma complex reveals binding of the rhodopsin C-terminal tail to the G beta subunit. Elife, 8, 2019
8QSX	Solution NMR structure of the novel adaptor domain TomBN91 from the Tomaymycin non-ribosomal peptide synthetase Descriptor: TomBN91 Authors: Karanth, M.N, Kirkpatrick, J.P, Carlomagno, T. Deposit date: 2023-10-11 Release date: 2024-06-26 Last modified: 2024-07-03 Method: SOLUTION NMR Cite: The specificity of intermodular recognition in a prototypical nonribosomal peptide synthetase depends on an adaptor domain. Sci Adv, 10, 2024
8C8M	In vitro structure of the Nitrosopumilus maritimus S-layer - Composite map between two and six-fold symmetrised Descriptor: Cell surface protein Authors: von Kuegelgen, A, Bharat, T. Deposit date: 2023-01-20 Release date: 2024-04-10 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.87 Å) Cite: Membraneless channels sieve cations in ammonia-oxidizing marine archaea. Nature, 630, 2024
8C8K	In vitro structure of the Nitrosopumilus maritimus S-layer - Six-fold symmetry (C6) Descriptor: Cell surface protein Authors: von Kuegelgen, A, Bharat, T. Deposit date: 2023-01-20 Release date: 2024-04-10 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.87 Å) Cite: Membraneless channels sieve cations in ammonia-oxidizing marine archaea. Nature, 630, 2024
8C8L	In vitro structure of the Nitrosopumilus maritimus S-layer - Two-fold symmetry (C2) Descriptor: Cell surface protein Authors: von Kuegelgen, A, Bharat, T. Deposit date: 2023-01-20 Release date: 2024-04-10 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.71 Å) Cite: Membraneless channels sieve cations in ammonia-oxidizing marine archaea. Nature, 630, 2024
6OQJ	SOLUTION STRUCTURE OF THE COMPLEX OF MUTANT VEK50[RH1/AA] AND PLASMINOGEN KRINGLE 2 Descriptor: Plasminogen kringle 2, Plasminogen-binding group A streptococcal M-like protein PAM Authors: Yuan, Y, Castellino, F.J. Deposit date: 2019-04-26 Release date: 2019-07-24 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structural model of the complex of the binding regions of human plasminogen with its M-protein receptor from Streptococcus pyogenes. J.Struct.Biol., 208, 2019
8CKA	Deinococcus radidurans HPI S-layer Descriptor: Hexagonally packed intermediate-layer surface protein Authors: von Kuegelgen, A, Yamashita, K, Murshudov, G, Bharat, T. Deposit date: 2023-02-14 Release date: 2023-04-19 Last modified: 2023-04-26 Method: ELECTRON MICROSCOPY (2.54 Å) Cite: Interdigitated immunoglobulin arrays form the hyperstable surface layer of the extremophilic bacterium Deinococcus radiodurans. Proc.Natl.Acad.Sci.USA, 120, 2023
7T5Q	Cryo-EM Structure of a Transition State of Arp2/3 Complex Activation Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ... Authors: Rebowski, G, van Eeuwen, T, Boczkowska, M, Dominguez, R. Deposit date: 2021-12-13 Release date: 2023-06-14 Last modified: 2023-08-02 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of an Arp2/3 complex mini-branch capped by capping protein (CapZ) To Be Published
7UJL	Bacteriophage Lambda Red-Beta N-terminal domain helical assembly in complex with dsDNA Descriptor: Complementary DNA, Recombination protein bet, Template DNA Authors: Newing, T.P, Tolun, G. Deposit date: 2022-03-31 Release date: 2022-10-05 Last modified: 2024-06-12 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: Red beta 177 annealase structure reveals details of oligomerization and lambda Red-mediated homologous DNA recombination Nat Commun, 13, 2022
6U3E	Best fitting antiparallel model for Volume 1 of truncated dimeric Cytohesin-3 (Grp1; amino acids 14-399) Descriptor: Cytohesin-3, INOSITOL-(1,3,4,5)-TETRAKISPHOSPHATE Authors: Das, S, Lambright, D.G. Deposit date: 2019-08-21 Release date: 2019-09-25 Last modified: 2023-11-29 Method: ELECTRON MICROSCOPY (53 Å) Cite: Structural Organization and Dynamics of Homodimeric Cytohesin Family Arf GTPase Exchange Factors in Solution and on Membranes. Structure, 27, 2019
7VFE	Cryo-EM structure of Vaccinia virus scaffolding protein D13 with N-terminal polyhistidine tag Descriptor: Scaffold protein D13 Authors: Wolf, M, Hyun, J, Matsunami, H, Kim, T.G. Deposit date: 2021-09-13 Release date: 2022-02-23 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.63 Å) Cite: Assembly mechanism of the pleomorphic immature poxvirus scaffold. Nat Commun, 13, 2022
7VFH	Cryo-EM structure of Vaccinia virus scaffolding protein D13 trimer sextet Descriptor: Scaffold protein D13 Authors: Wolf, M, Hyun, J, Matsunami, H, Kim, T.G. Deposit date: 2021-09-13 Release date: 2022-02-23 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Assembly mechanism of the pleomorphic immature poxvirus scaffold. Nat Commun, 13, 2022
7VFD	Cryo-EM structure of Vaccinia virus scaffolding protein D13 Descriptor: Scaffold protein D13 Authors: Wolf, M, Hyun, J, Matsunami, H, Kim, T.G. Deposit date: 2021-09-13 Release date: 2022-02-23 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.25 Å) Cite: Assembly mechanism of the pleomorphic immature poxvirus scaffold. Nat Commun, 13, 2022

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