6VPN

Solution structure of antifungal plant defensin PvD1

Summary for 6VPN

• Entry DOI: 10.2210/pdb6vpn/pdb
• NMR Information: BMRB: 30720
• Descriptor: Knot1 domain-containing protein (1 entity in total)
• Functional Keywords: antifungal plant defensin, antifungal protein
• Biological source: Phaseolus vulgaris (Kidney bean)
• Total number of polymer chains: 1
• Total formula weight: 5459.17

Authors

Harvey, P.J. (deposition date: 2020-02-03, release date: 2020-08-26, Last modification date: 2024-10-23)

Primary citation

Skalska, J.,Andrade, V.M.,Cena, G.L.,Harvey, P.J.,Gaspar, D.,Mello, E.O.,Henriques, S.T.,Valle, J.,Gomes, V.M.,Conceicao, K.,Castanho, M.A.R.B.,Andreu, D.
Synthesis, Structure, and Activity of the Antifungal Plant DefensinPvD1.
J.Med.Chem., 63:9391-9402, 2020

PubMed Abstract: Available treatments for invasive fungal infections have limitations, including toxicity and the emergence of resistant strains. Therefore, there is an urgent need for alternative solutions. Because of their unique mode of action and high selectivity, plant defensins (PDs) are worthy therapeutic candidates. Chemical synthesis remains a preferred method for the production of many peptide-based therapeutics. Given the relatively long sequence of PDs, as well as their complicated posttranslational modifications, the synthetic route can be considered challenging. Here, we describe a total synthesis of D, the defensin from the common bean . Analytical, structural, and functional characterization revealed that both natural and synthetic peptides fold into a canonical CSαβ motif stabilized by conserved disulfide bonds. Moreover, synthetic D retained the biological activity against four different species and showed no toxicity . Adding the high resistance of synthetic D to proteolytic degradation, we claim that conditions are now met to consider PDs druggable biologicals.

PubMed: 32787086
DOI: 10.1021/acs.jmedchem.0c00543

Experimental method

SOLUTION NMR