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6HKZ
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BU of 6hkz by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a inhibitor RNA 2-49-1
Descriptor: (2~{S})-2-[[(2~{S})-6-[2-[(6-fluoranylpyridin-3-yl)carbonylamino]ethyl-phenyl-amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Motlova, L, Novakova, Z, Barinka, C.
Deposit date:2018-09-09
Release date:2018-12-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:2-Aminoadipic Acid-C(O)-Glutamate Based Prostate-Specific Membrane Antigen Ligands for Potential Use as Theranostics.
ACS Med Chem Lett, 9, 2018
5KUS
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BU of 5kus by Molmil
Human cyclophilin A at 100K, Data set 6
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
Deposit date:2016-07-13
Release date:2016-08-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
5KV1
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BU of 5kv1 by Molmil
Human cyclophilin A at 278K, Data set 3
Descriptor: Peptidyl-prolyl cis-trans isomerase A
Authors:Russi, S, Gonzalez, A, Kenner, L.R, Keedy, D.A, Fraser, J.S, van den Bedem, H.
Deposit date:2016-07-13
Release date:2016-08-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Conformational variation of proteins at room temperature is not dominated by radiation damage.
J Synchrotron Radiat, 24, 2017
5KWA
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BU of 5kwa by Molmil
complete structure of the Mycobacterium tuberculosis proteasomal ATPase Mpa
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Proteasome-associated ATPase
Authors:Wang, T, WU, Y.J.
Deposit date:2016-07-17
Release date:2017-06-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mycobacterium tuberculosis proteasomal ATPase Mpa has a beta-grasp domain that hinders docking with the proteasome core protease
Mol. Microbiol., 105, 2017
5V50
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BU of 5v50 by Molmil
Crystal Structure of MpPR-1i
Descriptor: PR-1 protein
Authors:Luo, Z, Asojo, O.
Deposit date:2017-03-12
Release date:2017-08-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Crystal Structure of MpPR-1i, a SCP/TAPS protein from Moniliophthora perniciosa, the fungus that causes Witches' Broom Disease of Cacao.
Sci Rep, 7, 2017
5M16
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BU of 5m16 by Molmil
Structure of GH36 alpha-galactosidase from Thermotoga maritima in complex with a hydrolysed cyclopropyl carbasugar.
Descriptor: (1~{R},2~{S},3~{S},4~{S},5~{S},6~{S})-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4,5-tetrol, Alpha-galactosidase, MAGNESIUM ION, ...
Authors:Pengelly, R, Gloster, T.
Deposit date:2016-10-07
Release date:2016-11-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars.
Angew.Chem.Int.Ed.Engl., 55, 2016
5LZE
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BU of 5lze by Molmil
Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Fischer, N, Neumann, P, Bock, L.V, Maracci, C, Wang, Z, Paleskava, A, Konevega, A.L, Schroeder, G.F, Grubmueller, H, Ficner, R, Rodnina, M.V, Stark, H.
Deposit date:2016-09-29
Release date:2016-11-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The pathway to GTPase activation of elongation factor SelB on the ribosome.
Nature, 540, 2016
5LP5
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BU of 5lp5 by Molmil
Complex between Penicillin-Binding Protein (PBP2) and MreC from Helicobacter pylori
Descriptor: Penicillin-binding protein 2 (Pbp2), Rod shape-determining protein (MreC)
Authors:Contreras-Martel, C, Martins, A, Ecobichon, C, Maragno, D.M, Mattei, P.J, El Ghachi, M, Hicham, S, Hardouin, P, Boneca, I.G, Dessen, A.
Deposit date:2016-08-11
Release date:2017-08-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.74 Å)
Cite:Molecular architecture of the PBP2-MreC core bacterial cell wall synthesis complex.
Nat Commun, 8, 2017
5V62
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BU of 5v62 by Molmil
Phospho-ERK2 bound to bivalent inhibitor SBP3
Descriptor: 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE, GLYCEROL, Mitogen-activated protein kinase 1, ...
Authors:Lechtenberg, B.C, Riedl, S.J.
Deposit date:2017-03-15
Release date:2017-07-26
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors.
ACS Med Chem Lett, 8, 2017
6HB0
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BU of 6hb0 by Molmil
Crystal structure of MSMEG_1712 from Mycobacterium smegmatis
Descriptor: ABC transporter periplasmic-binding protein YtfQ, ZINC ION
Authors:Li, M, Mueller, C, Einsle, O, Jessen-Trefzer, C.
Deposit date:2018-08-09
Release date:2019-05-01
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Detection and Characterization of a Mycobacterial L-Arabinofuranose ABC Transporter Identified with a Rapid Lipoproteomics Protocol.
Cell Chem Biol, 26, 2019
1CWQ
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BU of 1cwq by Molmil
M INTERMEDIATE STRUCTURE OF THE WILD TYPE BACTERIORHODOPSIN IN COMBINATION WITH THE GROUND STATE STRUCTURE
Descriptor: BACTERIORHODOPSIN ("M" STATE INTERMEDIATE IN COMBINATION WITH GROUND STATE), HEXANE, N-OCTANE, ...
Authors:Sass, H.J, Berendzen, J, Neff, D, Gessenich, R, Ormos, P, Bueldt, G.
Deposit date:1999-08-26
Release date:1999-10-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural alterations for proton translocation in the M state of wild-type bacteriorhodopsin.
Nature, 406, 2000
5UX7
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BU of 5ux7 by Molmil
Activated state yeast Glycogen Synthase in complex with UDP-xylose
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase isoform 2, URIDINE-5'-DIPHOSPHATE, ...
Authors:Mahalingan, K.K, Hurley, T.D.
Deposit date:2017-02-22
Release date:2018-02-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Activated state yeast Glycogen Synthase in complex with UDP-xylose
To Be Published
5M1P
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BU of 5m1p by Molmil
Crystal structure of the large terminase nuclease from thermophilic phage G20c with bound Calcium
Descriptor: CALCIUM ION, Terminase large subunit
Authors:Xu, R.G, Jenkins, H.T, Chechik, M, Blagova, E.V, Greive, S.J, Antson, A.A.
Deposit date:2016-10-09
Release date:2016-10-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Viral genome packaging terminase cleaves DNA using the canonical RuvC-like two-metal catalysis mechanism.
Nucleic Acids Res., 45, 2017
6HZK
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BU of 6hzk by Molmil
Crystal structure of redox-inhibited phosphoribulokinase from Synechococcus sp. (strain PCC 6301)
Descriptor: Phosphoribulokinase
Authors:Wilson, R.H, Bracher, A, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2018-10-23
Release date:2019-03-27
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of phosphoribulokinase from Synechococcus sp. strain PCC 6301.
Acta Crystallogr.,Sect.F, 75, 2019
6HZY
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BU of 6hzy by Molmil
Crystal structure of a bacterial fucosidase with inhibitor FucPUG
Descriptor: 1,2-ETHANEDIOL, Alpha-L-fucosidase, SULFATE ION, ...
Authors:Wu, L, Davies, G.J, Stubbs, K.A, Coyle, T, Debowski, A.W.
Deposit date:2018-10-24
Release date:2019-02-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Synthetic and Crystallographic Insight into Exploiting sp2Hybridization in the Development of alpha-l-Fucosidase Inhibitors.
Chembiochem, 20, 2019
5NKQ
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BU of 5nkq by Molmil
Crystal structure of a dual topology fluoride ion channel.
Descriptor: FLUORIDE ION, Monobody, Putative fluoride ion transporter CrcB, ...
Authors:Stockbridge, R, Miller, C, Newstead, S.
Deposit date:2017-03-31
Release date:2017-04-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Crystal structures of a double-barrelled fluoride ion channel.
Nature, 525, 2015
5VIF
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BU of 5vif by Molmil
Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
Descriptor: 2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, CKII, UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit, ...
Authors:Jiang, J, Li, B, Hu, C.-W, Worth, M, Fan, D, Li, H.
Deposit date:2017-04-15
Release date:2017-10-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase.
Nat. Chem. Biol., 13, 2017
5NG3
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BU of 5ng3 by Molmil
Structure of inactive kinase RIP2K(K47R)
Descriptor: Receptor-interacting serine/threonine-protein kinase 2, SULFATE ION
Authors:Pellegrini, E, Cusack, S.
Deposit date:2017-03-16
Release date:2017-06-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of the inactive and active states of RIP2 kinase inform on the mechanism of activation.
PLoS ONE, 12, 2017
6HKJ
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BU of 6hkj by Molmil
X-ray structure of human glutamate carboxypeptidase II (GCPII) in complex with a inhibitor RNA 2-19-1
Descriptor: (2~{S})-2-[[(2~{S})-6-[(6-fluoranylpyridin-3-yl)amino]-1-oxidanyl-1,6-bis(oxidanylidene)hexan-2-yl]carbamoylamino]pentanedioic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Motlova, L, Novakova, Z, Barinka, C.
Deposit date:2018-09-06
Release date:2018-12-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:2-Aminoadipic Acid-C(O)-Glutamate Based Prostate-Specific Membrane Antigen Ligands for Potential Use as Theranostics.
ACS Med Chem Lett, 9, 2018
5NMG
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BU of 5nmg by Molmil
868 TCR in complex with HLA A02 presenting SLYFNTIAVL
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, GLYCEROL, ...
Authors:Rizkallah, P.J, Cole, D.K, Fuller, A, Sewell, A.K.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Dual Molecular Mechanisms Govern Escape at Immunodominant HLA A2-Restricted HIV Epitope.
Front Immunol, 8, 2017
5KPO
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BU of 5kpo by Molmil
Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
Descriptor: 1-[[3-(4-ethyl-3-oxidanylidene-piperazin-1-yl)carbonyl-4-fluoranyl-phenyl]methyl]quinazoline-2,4-dione, Poly [ADP-ribose] polymerase 1
Authors:Cao, R, Wang, Y.L, Zhou, J, Yao, H.P, Huang, N, Xu, B.L.
Deposit date:2016-07-05
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of human PARP1 catalytic domain bound to a quinazoline-2,4(1H,3H)-dione inhibitor
To Be Published
6HDI
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BU of 6hdi by Molmil
R49A variant of beta-phosphoglucomutase from Lactococcus lactis in an open conformer to 2.0 A.
Descriptor: 1,2-ETHANEDIOL, Beta-phosphoglucomutase, MAGNESIUM ION
Authors:Robertson, A.J, Bisson, C, Waltho, J.P.
Deposit date:2018-08-17
Release date:2020-08-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
5VNC
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BU of 5vnc by Molmil
Glycogen synthase in complex with UDP and glucosamine
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose, 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase isoform 2, ...
Authors:Mahalingan, K.K, Hurley, T.D.
Deposit date:2017-04-30
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Glycogen synthase in complex with UDP and glucosamine
To Be Published
6HDL
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BU of 6hdl by Molmil
R49K variant of beta-phosphoglucomutase from Lactococcus lactis complexed with magnesium trifluoride and beta-G6P to 1.2 A.
Descriptor: 1,2-ETHANEDIOL, 6-O-phosphono-beta-D-glucopyranose, Beta-phosphoglucomutase, ...
Authors:Wood, H.P, Robertson, A.J, Bisson, C, Waltho, J.P.
Deposit date:2018-08-17
Release date:2020-08-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Transition state of phospho-enzyme hydrolysis in beta-phosphoglucomutase.
To Be Published
1D8H
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BU of 1d8h by Molmil
X-RAY CRYSTAL STRUCTURE OF YEAST RNA TRIPHOSPHATASE IN COMPLEX WITH SULFATE AND MANGANESE IONS.
Descriptor: MANGANESE (II) ION, SULFATE ION, mRNA TRIPHOSPHATASE CET1
Authors:Lima, C.D, Wang, L.K, Shuman, S.
Deposit date:1999-10-24
Release date:1999-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of yeast RNA triphosphatase: an essential component of the mRNA capping apparatus.
Cell(Cambridge,Mass.), 99, 1999

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