Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JFQ
DownloadVisualize
BU of 6jfq by Molmil
K2U bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
Descriptor: (3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid, NICKEL (II) ION, Peptide deformylase
Authors:Lee, I.H, Ho, T.H, Kang, L.W.
Deposit date:2019-02-11
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:K2U bound crystal structure of class II peptide deformylase from methicillin resistant Staphylococcus aureus
To be published
5MXQ
DownloadVisualize
BU of 5mxq by Molmil
Crystal Structure of the Acquired VIM-2 Metallo-beta-Lactamase in Complex with ANT-90 Inhibitor
Descriptor: 3-(phenylsulfonylamino)pyridine-2-carboxylic acid, ACETATE ION, Beta-lactamase VIM-2, ...
Authors:Docquier, J.D, De Luca, F, Benvenuti, M, Di Pisa, F, Pozzi, C, Mangani, S.
Deposit date:2017-01-24
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:SAR Studies Leading to the Identification of a Novel Series of Metallo-beta-lactamase Inhibitors for the Treatment of Carbapenem-Resistant Enterobacteriaceae Infections That Display Efficacy in an Animal Infection Model.
Acs Infect Dis., 5, 2019
6JMS
DownloadVisualize
BU of 6jms by Molmil
CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
Descriptor: 1,2-ETHANEDIOL, Pollen allergen CJP38
Authors:Takashima, T, Numata, T, Fukamizo, T, Ohnuma, T.
Deposit date:2019-03-13
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:CJP38, a beta-1,3-glucanase and allergen of Cryptomeria japonica pollen
To Be Published
5U7V
DownloadVisualize
BU of 5u7v by Molmil
Crystal structure of a nucleoside triphosphate diphosphohydrolase (NTPDase) from the legume Trifolium repens in complex with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Apyrase
Authors:Cumming, M.H, Summers, E.L, Oulavallickal, T, Roberts, N, Arcus, V.L.
Deposit date:2016-12-12
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures and kinetics for plant nucleoside triphosphate diphosphohydrolases support a domain motion catalytic mechanism.
Protein Sci., 26, 2017
5KBG
DownloadVisualize
BU of 5kbg by Molmil
CRYSTAL STRUCTURE OF THE AROMATIC SENSOR DOMAIN OF MOPR IN COMPLEX WITH OCRESOL
Descriptor: MopR, ZINC ION, o-cresol
Authors:Ray, S, Anand, R, Panjikar, S.
Deposit date:2016-06-03
Release date:2016-07-13
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis of Selective Aromatic Pollutant Sensing by the Effector Binding Domain of MopR, an NtrC Family Transcriptional Regulator.
Acs Chem.Biol., 11, 2016
6JM5
DownloadVisualize
BU of 6jm5 by Molmil
Crystal structure of TBC1D23 C terminal domain
Descriptor: SODIUM ION, TBC1 domain family member 23
Authors:Sun, Q, Huang, W.
Deposit date:2019-03-07
Release date:2019-10-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional studies of TBC1D23 C-terminal domain provide a link between endosomal trafficking and PCH.
Proc.Natl.Acad.Sci.USA, 116, 2019
5MSE
DownloadVisualize
BU of 5mse by Molmil
GFP nuclear transport receptor mimic 3B8
Descriptor: Green fluorescent protein, IMIDAZOLE, SODIUM ION
Authors:Huyton, T, Gorlich, D.
Deposit date:2017-01-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Surface Properties Determining Passage Rates of Proteins through Nuclear Pores.
Cell, 174, 2018
6JNI
DownloadVisualize
BU of 6jni by Molmil
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Zinc(II) and DNA
Descriptor: CadR, DNA (25-MER), ZINC ION
Authors:Liu, X.C, Gan, J.H, Chen, H.
Deposit date:2019-03-16
Release date:2019-09-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Selective cadmium regulation mediated by a cooperative binding mechanism in CadR.
Proc.Natl.Acad.Sci.USA, 116, 2019
5U9A
DownloadVisualize
BU of 5u9a by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-15
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1F74
DownloadVisualize
BU of 1f74 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF N-ACETYLNEURAMINATE LYASE FROM HAEMOPHILUS INFLUENZAE: CRYSTAL FORM II COMPLEXED WITH 4-DEOXY-SIALIC ACID
Descriptor: 6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-2-OXONONANOIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Barbosa, J.A.R.G, Smith, B.J, DeGori, R, Lawrence, M.C.
Deposit date:2000-06-26
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Active site modulation in the N-acetylneuraminate lyase sub-family as revealed by the structure of the inhibitor-complexed Haemophilus influenzae enzyme.
J.Mol.Biol., 303, 2000
6JOH
DownloadVisualize
BU of 6joh by Molmil
The crystal of nucleoside diphosphate kinase from Aspergillus flavus
Descriptor: Nucleoside diphosphate kinase
Authors:Wang, Y, Wang, S, Wang, S.H.
Deposit date:2019-03-21
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular and structural basis of Nucleoside Diphosphate Kinase regulating the spores and sclerotia development in Aspergillus flavus
To Be Published
5KDU
DownloadVisualize
BU of 5kdu by Molmil
ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen
Descriptor: 1,2-ETHANEDIOL, F5/8 type C domain protein, SERINE, ...
Authors:Noach, I, Ficko-Blean, E, Stuart, C, Boraston, A.B.
Deposit date:2016-06-08
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Recognition of protein-linked glycans as a determinant of peptidase activity.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5MT9
DownloadVisualize
BU of 5mt9 by Molmil
Human insulin in complex with serotonin and arginine
Descriptor: ARGININE, CHLORIDE ION, Insulin, ...
Authors:Brzozowski, A.M, Turkenburg, J.P, Jiracek, J, Zakova, L.
Deposit date:2017-01-07
Release date:2017-04-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Computational and structural evidence for neurotransmitter-mediated modulation of the oligomeric states of human insulin in storage granules.
J. Biol. Chem., 292, 2017
6JOW
DownloadVisualize
BU of 6jow by Molmil
Exo-beta-D-glucosaminidase from Pyrococcus furiosus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-galactosidase, CALCIUM ION
Authors:Mine, S, Watanabe, M.
Deposit date:2019-03-24
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Exo-beta-D-glucosaminidase from Pyrococcus furiosus
To Be Published
5MU0
DownloadVisualize
BU of 5mu0 by Molmil
ACC1 Fab fragment in complex with citrullinated C1 epitope of CII (IA03)
Descriptor: IA03 peptide containing the citrullinated C1 epitope of collagen type II,Collagen alpha-1(II) chain,IA03 peptide containing the citrullinated C1 epitope of collagen type II, heavy chain of ACC1 antibody Fab fragment, light chain of ACC1 antibody Fab fragment
Authors:Dobritzsch, D, Holmdahl, R, Ge, C.
Deposit date:2017-01-11
Release date:2017-07-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Anti-citrullinated protein antibodies cause arthritis by cross-reactivity to joint cartilage.
JCI Insight, 2, 2017
5JV4
DownloadVisualize
BU of 5jv4 by Molmil
Structure of F420 binding protein, MSMEG_6526, from Mycobacterium smegmatis with F420 bound
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, COENZYME F420, ...
Authors:Lee, B.M, Carr, P.D, Jackson, C.J.
Deposit date:2016-05-10
Release date:2017-08-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of F420 binding protein, MSMEG_6526, from Mycobacterium smegmatis with F420 bound
To Be Published
5MVV
DownloadVisualize
BU of 5mvv by Molmil
Crystal structure of Plasmodium falciparum actin I- gelsolin segment 1 -CdATP complex
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-1, CADMIUM ION, ...
Authors:Panneerselvam, S, Kumpula, E.-P, Kursula, I, Burkhardt, A, Meents, A.
Deposit date:2017-01-17
Release date:2017-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Rapid cadmium SAD phasing at the standard wavelength (1 angstrom ).
Acta Crystallogr D Struct Biol, 73, 2017
1F7B
DownloadVisualize
BU of 1f7b by Molmil
CRYSTAL STRUCTURE ANALYSIS OF N-ACETYLNEURAMINATE LYASE FROM HAEMOPHILUS INFLUENZAE: CRYSTAL FORM II IN COMPLEX WITH 4-OXO-SIALIC ACID
Descriptor: 4,4,6,7,8,9-HEXAHYDROXY-5-METHYLCARBOXAMIDONONANOIC ACID, 6,7,8,9-TETRAHYDROXY-5-METHYLCARBOXAMIDO-4-OXONONANOIC ACID, CHLORIDE ION, ...
Authors:Barbosa, J.A.R.G, Smith, B.J, DeGori, R, Lawrence, M.C.
Deposit date:2000-06-26
Release date:2000-11-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Active site modulation in the N-acetylneuraminate lyase sub-family as revealed by the structure of the inhibitor-complexed Haemophilus influenzae enzyme.
J.Mol.Biol., 303, 2000
6JRC
DownloadVisualize
BU of 6jrc by Molmil
ZHD complex with hydrolyzed alpha-ZOL
Descriptor: 2-[(~{E},6~{R},10~{S})-6,10-bis(oxidanyl)undec-1-enyl]-4,6-bis(oxidanyl)benzoic acid, GLYCEROL, POTASSIUM ION, ...
Authors:Hu, X.J.
Deposit date:2019-04-03
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of ZHD complex
To Be Published
5UAD
DownloadVisualize
BU of 5uad by Molmil
MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody
Descriptor: CHLORIDE ION, Hepatocyte growth factor receptor, N-(6-{[6-(1-methyl-1H-pyrazol-4-yl)-1H-benzotriazol-1-yl]methyl}imidazo[1,2-b]pyridazin-2-yl)cyclopropanecarboxamide
Authors:Hoffman, I.D, Lawson, J.D.
Deposit date:2016-12-19
Release date:2017-05-31
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:MET Tyrosine Kinase Inhibition Enhances the Antitumor Efficacy of an HGF Antibody.
Mol. Cancer Ther., 16, 2017
5JW6
DownloadVisualize
BU of 5jw6 by Molmil
Cystal structure of aspartate semialdehyde dehydrogenase from Aspergillus fumigatus
Descriptor: Aspartate-semialdehyde dehydrogenase, SULFATE ION
Authors:Dahal, G.P, Viola, R.E.
Deposit date:2016-05-11
Release date:2017-01-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structure of a fungal form of aspartate-semialdehyde dehydrogenase from Aspergillus fumigatus.
Acta Crystallogr F Struct Biol Commun, 73, 2017
1F73
DownloadVisualize
BU of 1f73 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF N-ACETYLNEURAMINATE LYASE FROM HAEMOPHILUS INFLUENZAE: CRYSTAL FORM III IN COMPLEX WITH SIALIC ACID ALDITOL
Descriptor: 2,4,6,7,8,9-HEXAHYDROXY-5-METHYLCARBOXAMIDO NONANOIC ACID, GLYCEROL, N-ACETYL NEURAMINATE LYASE
Authors:Barbosa, J.A.R.G, Smith, B.J, DeGori, R, Lawrence, M.C.
Deposit date:2000-06-25
Release date:2000-11-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Active site modulation in the N-acetylneuraminate lyase sub-family as revealed by the structure of the inhibitor-complexed Haemophilus influenzae enzyme.
J.Mol.Biol., 303, 2000
6JC6
DownloadVisualize
BU of 6jc6 by Molmil
Crystal structure of the purple chromoprotein of Stichodactyla haddoni with a Glu-Tyr-Gly tri-peptide chromophore
Descriptor: shCP
Authors:Ko, T.P, Huang, K.F, Chang, H.Y.
Deposit date:2019-01-28
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the blue fluorescent protein with a Leu-Leu-Gly tri-peptide chromophore derived from the purple chromoprotein of Stichodactyla haddoni.
Int. J. Biol. Macromol., 130, 2019
6JH5
DownloadVisualize
BU of 6jh5 by Molmil
Structure of Marine bacterial laminarinase
Descriptor: CALCIUM ION, LamCAT
Authors:Yang, J, Xu, Y, Miyakawa, T, Ru, L, Tanokura, M, Long, L.
Deposit date:2019-02-17
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular Basis for Substrate Recognition and Catalysis by a Marine Bacterial Laminarinase.
Appl.Environ.Microbiol., 86, 2020
6JER
DownloadVisualize
BU of 6jer by Molmil
Apo crystal structure of class I type a peptide deformylase from Acinetobacter baumannii
Descriptor: Peptide deformylase, ZINC ION
Authors:Ho, T.H, Lee, I.H, Kang, L.W.
Deposit date:2019-02-07
Release date:2020-02-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Expression, crystallization, and preliminary X-ray crystallographic analysis of peptide deformylase from Acinetobacter baumanii
Biodesign, 5, 2017

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon