5KDU

ZmpB metallopeptidase in complex with a2,6-Sialyl T-antigen

Summary for 5KDU

Entry DOI	10.2210/pdb5kdu/pdb
Related	5KD2 5KD5 5KD8 5KDJ 5KDN 5KDS 5KDV 5KDW 5KDX
Descriptor	F5/8 type C domain protein, beta-D-galactopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-alpha-D-galactopyranose, 1,2-ETHANEDIOL, ... (6 entities in total)
Functional Keywords	glycopeptidase, o-glycan, pf13402, hydrolase
Biological source	Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A)
Total number of polymer chains	1
Total formula weight	61484.57
Authors	Noach, I.,Ficko-Blean, E.,Stuart, C.,Boraston, A.B. (deposition date: 2016-06-08, release date: 2017-01-11, Last modification date: 2023-09-27)
Primary citation	Noach, I.,Ficko-Blean, E.,Pluvinage, B.,Stuart, C.,Jenkins, M.L.,Brochu, D.,Buenbrazo, N.,Wakarchuk, W.,Burke, J.E.,Gilbert, M.,Boraston, A.B. Recognition of protein-linked glycans as a determinant of peptidase activity. Proc. Natl. Acad. Sci. U.S.A., 114:E679-E688, 2017 Cited by PubMed: 28096352 DOI: 10.1073/pnas.1615141114 PDB entries with the same primary citation
Experimental method	X-RAY DIFFRACTION (2 Å)

Structure validation