5KDS
ZmpB metallopeptidase in complex with an O-glycopeptide (a2,6-sialylated core-3 pentapeptide).
Summary for 5KDS
Entry DOI | 10.2210/pdb5kds/pdb |
Related | 5KD2 5KD5 5KD8 5KDJ 5KDN 5KDU 5KDV 5KDW 5KDX |
Descriptor | alpha2,6-sialylated core-3 pentapeptide, F5/8 type C domain protein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-[N-acetyl-alpha-neuraminic acid-(2-6)]2-acetamido-2-deoxy-alpha-D-galactopyranose, ... (8 entities in total) |
Functional Keywords | o-glycopeptidase, pf13402/m60-like, bovine submaxillary mucin, o-glycan, hydrolase |
Biological source | Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) More |
Total number of polymer chains | 2 |
Total formula weight | 61962.06 |
Authors | Noach, I.,Ficko-Blean, E.,Stuart, C.,Boraston, A.B. (deposition date: 2016-06-08, release date: 2017-01-11, Last modification date: 2023-09-27) |
Primary citation | Noach, I.,Ficko-Blean, E.,Pluvinage, B.,Stuart, C.,Jenkins, M.L.,Brochu, D.,Buenbrazo, N.,Wakarchuk, W.,Burke, J.E.,Gilbert, M.,Boraston, A.B. Recognition of protein-linked glycans as a determinant of peptidase activity. Proc. Natl. Acad. Sci. U.S.A., 114:E679-E688, 2017 Cited by PubMed: 28096352DOI: 10.1073/pnas.1615141114 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (1.6 Å) |
Structure validation
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