Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7TX0
DownloadVisualize
BU of 7tx0 by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 9 (P43 crystal form)
Descriptor: Non-structural protein 3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 9 (P43 crystal form)
To Be Published
4UA9
DownloadVisualize
BU of 4ua9 by Molmil
CTX-M-14 Class A Beta-Lactamase in Complex with a Boronic Acid Acylation Transition State Analog at Sub-Angstrom Resolution
Descriptor: Beta-lactamase CTX-M-14, PHOSPHATE ION, PINACOL[[2-AMINO-ALPHA-(1-CARBOXY-1-METHYLETHOXYIMINO)-4-THIAZOLEACETYL]AMINO]METHANEBORONATE
Authors:Nichols, D.A, Chen, Y.
Deposit date:2014-08-08
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Ligand-Induced Proton Transfer and Low-Barrier Hydrogen Bond Revealed by X-ray Crystallography.
J.Am.Chem.Soc., 137, 2015
3ZQV
DownloadVisualize
BU of 3zqv by Molmil
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS AT 0.84 A RESOLUTION: NON-RESTRAINED REFINEMENT
Descriptor: CYTOCHROME C', HEME C, SULFATE ION
Authors:Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
Deposit date:2011-06-12
Release date:2011-10-05
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
7WKG
DownloadVisualize
BU of 7wkg by Molmil
The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with erucic acid
Descriptor: (Z)-docos-13-enoic acid, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2022-01-09
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with erucic acid
To Be Published
1P9G
DownloadVisualize
BU of 1p9g by Molmil
Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Ecommia ulmoides Oliver at atomic resolution
Descriptor: ACETATE ION, EAFP 2
Authors:Xiang, Y, Huang, R.H, Liu, X.Z, Wang, D.C.
Deposit date:2003-05-12
Release date:2004-06-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Eucommia ulmoides Oliver at an atomic resolution.
J.Struct.Biol., 148, 2004
5MAS
DownloadVisualize
BU of 5mas by Molmil
Peptaibol Bergofungin A
Descriptor: Bergofungin A
Authors:Gessmann, R, Petratos, K.
Deposit date:2016-11-04
Release date:2017-02-22
Last modified:2017-03-01
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:A natural, single-residue substitution yields a less active peptaibiotic: the structure of bergofungin A at atomic resolution.
Acta Crystallogr F Struct Biol Commun, 73, 2017
7BNH
DownloadVisualize
BU of 7bnh by Molmil
Complex structure at atomic resolution of SH3b domain with benzoic acid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BENZOIC ACID, GLYCEROL, ...
Authors:Malecki, P.H, Sabala, I.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Complex structure of SH3b domain with benzoic acid
To Be Published
7FFK
DownloadVisualize
BU of 7ffk by Molmil
The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitoleic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Kakinouchi, K, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2021-07-23
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitoleic acid
To Be Published
4EIC
DownloadVisualize
BU of 4eic by Molmil
Crystal structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002 at ultra-high resolution
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c6, HEME C
Authors:Krzywda, S, Bialek, W, Jaskolski, M, Szczepaniak, A.
Deposit date:2012-04-05
Release date:2013-04-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function.
To be Published
2O7A
DownloadVisualize
BU of 2o7a by Molmil
T4 lysozyme C-terminal fragment
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme
Authors:Echols, N, Kwon, E, Marqusee, S.M, Alber, T.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
2YKZ
DownloadVisualize
BU of 2ykz by Molmil
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS AT 0.84 A RESOLUTION: RESTRAINED REFINEMENT
Descriptor: CYTOCHROME C', HEME C, SULFATE ION
Authors:Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
Deposit date:2011-05-30
Release date:2011-10-05
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
4LAU
DownloadVisualize
BU of 4lau by Molmil
Crystal structure of human AR complexed with NADP+ and {2-[(4-bromobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Descriptor: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, {2-[(4-bromobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Authors:Cousido-Siah, A, Mitschler, A, Ruiz, F.X, Fanfrlik, J, Kolar, M, Hobza, P, Podjarny, A.
Deposit date:2013-06-20
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.843 Å)
Cite:Modulation of aldose reductase inhibition by halogen bond tuning.
Acs Chem.Biol., 8, 2013
4PSS
DownloadVisualize
BU of 4pss by Molmil
Multiconformer model for Escherichia coli dihydrofolate reductase at 100K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-07
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.849 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
6AIQ
DownloadVisualize
BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
1MC2
DownloadVisualize
BU of 1mc2 by Molmil
monomeric LYS-49 phospholipase A2 homologue purified from AG
Descriptor: Acutohaemonlysin, ISOPROPYL ALCOHOL
Authors:Liu, Q, Huang, Q.Q, Zhang, R.G, Weeks, C.M, Jelsch, C, Teng, M.K, Niu, L.W.
Deposit date:2002-08-05
Release date:2002-08-21
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The crystal structure of a novel, inactive, lysine 49 PLA2 from Agkistrodon acutus venom: an ultrahigh resolution, AB initio structure determination
J.Biol.Chem., 278, 2003
6UCX
DownloadVisualize
BU of 6ucx by Molmil
S2 symmetric peptide design number 1, Wednesday
Descriptor: S2-1, Wednesday, trifluoroacetic acid
Authors:Mulligan, V.K, Kang, C.S, Antselovich, I, Sawaya, M.R, Yeates, T.O, Baker, D.
Deposit date:2019-09-18
Release date:2020-09-23
Last modified:2021-07-28
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Computational design of mixed chirality peptide macrocycles with internal symmetry.
Protein Sci., 29, 2020
4O8H
DownloadVisualize
BU of 4o8h by Molmil
0.85A resolution structure of PEG 400 Bound Cyclophilin D
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Lovell, S, Valasani, K.R, Battaile, K.P, Wang, C, Yan, S.S.
Deposit date:2013-12-27
Release date:2014-06-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:High-resolution crystal structures of two crystal forms of human cyclophilin D in complex with PEG 400 molecules.
Acta Crystallogr F Struct Biol Commun, 70, 2014
6UN0
DownloadVisualize
BU of 6un0 by Molmil
Crystal structure of photoactive yellow protein (PYP); F96(4-IF) construct with 3-Br-p-coumaric acid chromophore
Descriptor: (2E)-3-(3-bromo-4-hydroxyphenyl)prop-2-enoic acid, Photoactive yellow protein
Authors:Lin, C.-Y, Romei, M.G, Boxer, S.G.
Deposit date:2019-10-10
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Structural and spectroscopic characterization of photoactive yellow protein and photoswitchable fluorescent protein constructs containing heavy atoms.
J Photochem Photobiol A Chem, 401, 2020
5XVT
DownloadVisualize
BU of 5xvt by Molmil
Crystal Structure of Transketolase in complex with hydroxylated TPP from Pichia Stipitis, crystal 2
Descriptor: 2-[(2R)-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-oxidanyl-2H-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Li, T.L, Hsu, N.S, Wang, Y.L.
Deposit date:2017-06-28
Release date:2018-04-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The Mesomeric Effect of Thiazolium on non-Kekule Diradicals in Pichia stipitis Transketolase.
Angew. Chem. Int. Ed. Engl., 57, 2018
3U7T
DownloadVisualize
BU of 3u7t by Molmil
Room temperature ultra-high resolution time-of-flight neutron and X-ray diffraction studies of H/D exchanged crambin
Descriptor: Crambin
Authors:Chen, J.C.-H.
Deposit date:2011-10-14
Release date:2012-02-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Room-temperature ultrahigh-resolution time-of-flight neutron and X-ray diffraction studies of H/D-exchanged crambin.
Acta Crystallogr.,Sect.F, 68, 2012
5JQF
DownloadVisualize
BU of 5jqf by Molmil
Crystal structure of the lasso peptide Sphingopyxin I (SpI)
Descriptor: Sphingopyxin I
Authors:Fage, C.D, Hegemann, J.D, Harms, K, Bange, G, Marahiel, M.A.
Deposit date:2016-05-04
Release date:2016-09-14
Last modified:2021-06-16
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Structure and Mechanism of the Sphingopyxin I Lasso Peptide Isopeptidase.
Angew. Chem. Int. Ed. Engl., 55, 2016
1PJX
DownloadVisualize
BU of 1pjx by Molmil
0.85 ANGSTROM STRUCTURE OF SQUID GANGLION DFPASE
Descriptor: 1,2-DIMETHOXYETHANE, 1,2-ETHANEDIOL, 1-ETHOXY-2-(2-METHOXYETHOXY)ETHANE, ...
Authors:Koepke, J, Rueterjans, H, Luecke, C, Fritzsch, G.
Deposit date:2003-06-04
Release date:2004-06-08
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Statistical analysis of crystallographic data obtained from squid ganglion DFPase at 0.85 A resolution.
Acta Crystallogr.,Sect.D, 59, 2003
7P4R
DownloadVisualize
BU of 7p4r by Molmil
Ultra High Resolution X-ray Structure of Orthorhombic Bovine Pancreatic Ribonuclease at 100K
Descriptor: ETHANOL, Ribonuclease pancreatic, SULFATE ION
Authors:Lisgarten, D.R, Palmer, R.A, Cooper, J.B, Naylor, C.E, Howlin, B.J, Lisgarten, J.N, Najmudin, S, Lobley, C.M.C.
Deposit date:2021-07-12
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Ultra-high resolution X-ray structure of orthorhombic bovine pancreatic Ribonuclease A at 100K.
BMC Chem, 17, 2023
6ETL
DownloadVisualize
BU of 6etl by Molmil
Atomic resolution structure of RNase A (data collection 2)
Descriptor: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
Authors:Caterino, M, Vergara, A, Merlino, A.
Deposit date:2017-10-27
Release date:2018-02-21
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Raman-markers of X-ray radiation damage of proteins.
Int. J. Biol. Macromol., 111, 2018
4XXG
DownloadVisualize
BU of 4xxg by Molmil
Structure of protonated Cholesterol Oxidase from Streptomyces SA-COO
Descriptor: Cholesterol oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Golden, E, Vrielink, A.
Deposit date:2015-01-30
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Production and characterization of recombinant perdeuterated cholesterol oxidase.
Anal.Biochem., 485, 2015

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon