Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2O7A
DownloadVisualize
BU of 2o7a by Molmil
T4 lysozyme C-terminal fragment
Descriptor: ACETATE ION, CHLORIDE ION, Lysozyme
Authors:Echols, N, Kwon, E, Marqusee, S.M, Alber, T.
Deposit date:2006-12-10
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Exploring subdomain cooperativity in T4 lysozyme I: Structural and energetic studies of a circular permutant and protein fragment.
Protein Sci., 16, 2007
4EIC
DownloadVisualize
BU of 4eic by Molmil
Crystal structure of reduced cytochrome c6 from Synechococcus sp. PCC 7002 at ultra-high resolution
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cytochrome c6, HEME C
Authors:Krzywda, S, Bialek, W, Jaskolski, M, Szczepaniak, A.
Deposit date:2012-04-05
Release date:2013-04-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Cytochrome c6 and c6C from Synechococcus sp. PCC 7002 - structure and function.
To be Published
7BNH
DownloadVisualize
BU of 7bnh by Molmil
Complex structure at atomic resolution of SH3b domain with benzoic acid
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BENZOIC ACID, GLYCEROL, ...
Authors:Malecki, P.H, Sabala, I.
Deposit date:2021-01-22
Release date:2021-02-17
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Complex structure of SH3b domain with benzoic acid
To Be Published
7WKG
DownloadVisualize
BU of 7wkg by Molmil
The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with erucic acid
Descriptor: (Z)-docos-13-enoic acid, Fatty acid-binding protein, heart, ...
Authors:Sugiyama, S, Kakinouchi, K, Nakano, R, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2022-01-09
Release date:2023-01-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with erucic acid
To Be Published
7G0Z
DownloadVisualize
BU of 7g0z by Molmil
Crystal Structure of human FABP4 binding site mutated to that of FABP5 in complex with 5-[[3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl]-3,6-dihydro-2H-pyran-4-carboxylic acid
Descriptor: 5-{[(3M)-3-(3-cyclopropyl-1,2,4-oxadiazol-5-yl)-4,5,6,7-tetrahydro-1-benzothiophen-2-yl]carbamoyl}-3,6-dihydro-2H-pyran-4-carboxylic acid, Fatty acid-binding protein, adipocyte
Authors:Ehler, A, Benz, J, Obst, U, Richter, H, Rudolph, M.G.
Deposit date:2023-04-27
Release date:2023-06-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Crystal Structure of a human FABP4 binding site mutated to that of FABP5 complex
To be published
7TX0
DownloadVisualize
BU of 7tx0 by Molmil
Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 9 (P43 crystal form)
Descriptor: Non-structural protein 3, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Correy, G.J, Fraser, J.S.
Deposit date:2022-02-07
Release date:2022-02-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Crystal structure of SARS-CoV-2 NSP3 macrodomain in complex with ADP-ribose at pH 9 (P43 crystal form)
To Be Published
7FFK
DownloadVisualize
BU of 7ffk by Molmil
The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitoleic acid
Descriptor: Fatty acid-binding protein, heart, HEXAETHYLENE GLYCOL, ...
Authors:Sugiyama, S, Kakinouchi, K, Matsuoka, S, Tsuchikawa, H, Sonoyama, M, Inoue, Y, Hayashi, F, Murata, M.
Deposit date:2021-07-23
Release date:2022-07-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:The 0.84 angstrom X-ray structure of the human heart fatty acid-binding protein complexed with palmitoleic acid
To Be Published
1XVO
DownloadVisualize
BU of 1xvo by Molmil
Trypsin from Fusarium oxysporum at pH 6
Descriptor: SULFATE ION, trypsin
Authors:Schmidt, A, Lamzin, V.S.
Deposit date:2004-10-28
Release date:2005-07-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Extraction of functional motion in trypsin crystal structures.
Acta Crystallogr.,Sect.D, 61, 2005
3ZQV
DownloadVisualize
BU of 3zqv by Molmil
RECOMBINANT NATIVE CYTOCHROME C PRIME FROM ALCALIGENES XYLOSOXIDANS AT 0.84 A RESOLUTION: NON-RESTRAINED REFINEMENT
Descriptor: CYTOCHROME C', HEME C, SULFATE ION
Authors:Antonyuk, S.V, Eady, R.R, Hasnain, S.S.
Deposit date:2011-06-12
Release date:2011-10-05
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Carbon Monoxide Poisoning is Prevented by the Energy Costs of Conformational Changes in Gas- Binding Haemproteins.
Proc.Natl.Acad.Sci.USA, 108, 2011
1P9G
DownloadVisualize
BU of 1p9g by Molmil
Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Ecommia ulmoides Oliver at atomic resolution
Descriptor: ACETATE ION, EAFP 2
Authors:Xiang, Y, Huang, R.H, Liu, X.Z, Wang, D.C.
Deposit date:2003-05-12
Release date:2004-06-01
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Crystal structure of a novel antifungal protein distinct with five disulfide bridges from Eucommia ulmoides Oliver at an atomic resolution.
J.Struct.Biol., 148, 2004
2HS1
DownloadVisualize
BU of 2hs1 by Molmil
Ultra-high resolution X-ray crystal structure of HIV-1 protease V32I mutant with TMC114 (darunavir) inhibitor
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Weber, I.T, Kovalevsky, A.Y.
Deposit date:2006-07-20
Release date:2006-10-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Ultra-high Resolution Crystal Structure of HIV-1 Protease Mutant Reveals Two Binding Sites for Clinical Inhibitor TMC114.
J.Mol.Biol., 363, 2006
4LAU
DownloadVisualize
BU of 4lau by Molmil
Crystal structure of human AR complexed with NADP+ and {2-[(4-bromobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Descriptor: Aldose reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, {2-[(4-bromobenzyl)carbamoyl]-5-chlorophenoxy}acetic acid
Authors:Cousido-Siah, A, Mitschler, A, Ruiz, F.X, Fanfrlik, J, Kolar, M, Hobza, P, Podjarny, A.
Deposit date:2013-06-20
Release date:2014-04-30
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.843 Å)
Cite:Modulation of aldose reductase inhibition by halogen bond tuning.
Acs Chem.Biol., 8, 2013
4PSS
DownloadVisualize
BU of 4pss by Molmil
Multiconformer model for Escherichia coli dihydrofolate reductase at 100K
Descriptor: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION, ...
Authors:Keedy, D.A, van den Bedem, H, Sivak, D.A, Petsko, G.A, Ringe, D, Wilson, M.A, Fraser, J.S.
Deposit date:2014-03-07
Release date:2014-06-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.849 Å)
Cite:Crystal Cryocooling Distorts Conformational Heterogeneity in a Model Michaelis Complex of DHFR.
Structure, 22, 2014
4O8H
DownloadVisualize
BU of 4o8h by Molmil
0.85A resolution structure of PEG 400 Bound Cyclophilin D
Descriptor: DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, Peptidyl-prolyl cis-trans isomerase F, ...
Authors:Lovell, S, Valasani, K.R, Battaile, K.P, Wang, C, Yan, S.S.
Deposit date:2013-12-27
Release date:2014-06-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:High-resolution crystal structures of two crystal forms of human cyclophilin D in complex with PEG 400 molecules.
Acta Crystallogr F Struct Biol Commun, 70, 2014
7P4R
DownloadVisualize
BU of 7p4r by Molmil
Ultra High Resolution X-ray Structure of Orthorhombic Bovine Pancreatic Ribonuclease at 100K
Descriptor: ETHANOL, Ribonuclease pancreatic, SULFATE ION
Authors:Lisgarten, D.R, Palmer, R.A, Cooper, J.B, Naylor, C.E, Howlin, B.J, Lisgarten, J.N, Najmudin, S, Lobley, C.M.C.
Deposit date:2021-07-12
Release date:2022-07-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Ultra-high resolution X-ray structure of orthorhombic bovine pancreatic Ribonuclease A at 100K.
BMC Chem, 17, 2023
4AYO
DownloadVisualize
BU of 4ayo by Molmil
Structure of The GH47 processing alpha-1,2-mannosidase from Caulobacter strain K31
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, MANNOSYL-OLIGOSACCHARIDE 1,2-ALPHA-MANNOSIDASE, ...
Authors:Thompson, A.J, Dabin, J, Iglesias-Fernandez, J, Iglesias-Fernandez, A, Dinev, Z, Williams, S.J, Siriwardena, A, Moreland, C, Hu, T.C, Smith, D.K, Gilbert, H.J, Rovira, C, Davies, G.J.
Deposit date:2012-06-21
Release date:2013-01-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The Reaction Coordinate of a Bacterial Gh47 Alpha-Mannosidase: A Combined Quantum Mechanical and Structural Approach.
Angew.Chem.Int.Ed.Engl., 51, 2012
5EMB
DownloadVisualize
BU of 5emb by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal phosphorylated PTHR PDZ binding motif
Descriptor: GLU-GLU-TRP-SEP-THR-VAL-MET, Sorting nexin-27
Authors:Collins, B.M, Clairfeuille, T.
Deposit date:2015-11-06
Release date:2016-09-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
7RVE
DownloadVisualize
BU of 7rve by Molmil
Segment from the S170N mutant of the human prion protein 168-176 EYNNQNNFV
Descriptor: Major prion protein
Authors:Glynn, C, Rodriguez, J.A, Hernandez, E.
Deposit date:2021-08-18
Release date:2022-08-24
Last modified:2024-05-22
Method:ELECTRON CRYSTALLOGRAPHY (0.85 Å)
Cite:Structural and Biophysical Consequences of Sequence Variation in the B2a2 Loop of Mammalian Prions
To be published
6AIR
DownloadVisualize
BU of 6air by Molmil
High resolution structure of perdeuterated high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
4D5M
DownloadVisualize
BU of 4d5m by Molmil
Gonadotropin-releasing hormone agonist
Descriptor: PHOSPHATE ION, TRIPTORELIN
Authors:Legrand, P, Le Du, M.-H, Valery, C, Deville-Foillard, S, Paternostre, M, Artzner, F.
Deposit date:2014-11-05
Release date:2015-08-12
Last modified:2020-03-11
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Atomic View of the Histidine Environment Stabilizing Higher- Ph Conformations of Ph-Dependent Proteins.
Nat.Commun., 6, 2015
6AIQ
DownloadVisualize
BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
4XXG
DownloadVisualize
BU of 4xxg by Molmil
Structure of protonated Cholesterol Oxidase from Streptomyces SA-COO
Descriptor: Cholesterol oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Golden, E, Vrielink, A.
Deposit date:2015-01-30
Release date:2015-12-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Production and characterization of recombinant perdeuterated cholesterol oxidase.
Anal.Biochem., 485, 2015
1X8Q
DownloadVisualize
BU of 1x8q by Molmil
0.85 A Crystal Structure Of Nitrophorin 4 From Rhodnius Prolixus in Complex with Water at pH 5.6
Descriptor: Nitrophorin 4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Kondrashov, D.A, Roberts, S.A, Weichsel, A, Montfort, W.R.
Deposit date:2004-08-18
Release date:2004-10-05
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Protein functional cycle viewed at atomic resolution: conformational change and mobility in nitrophorin 4 as a function of pH and NO binding
Biochemistry, 43, 2004
5XVT
DownloadVisualize
BU of 5xvt by Molmil
Crystal Structure of Transketolase in complex with hydroxylated TPP from Pichia Stipitis, crystal 2
Descriptor: 2-[(2R)-3-[(4-azanyl-2-methyl-pyrimidin-5-yl)methyl]-4-methyl-2-oxidanyl-2H-1,3-thiazol-5-yl]ethyl phosphono hydrogen phosphate, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Li, T.L, Hsu, N.S, Wang, Y.L.
Deposit date:2017-06-28
Release date:2018-04-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:The Mesomeric Effect of Thiazolium on non-Kekule Diradicals in Pichia stipitis Transketolase.
Angew. Chem. Int. Ed. Engl., 57, 2018
6ETL
DownloadVisualize
BU of 6etl by Molmil
Atomic resolution structure of RNase A (data collection 2)
Descriptor: ISOPROPYL ALCOHOL, Ribonuclease pancreatic
Authors:Caterino, M, Vergara, A, Merlino, A.
Deposit date:2017-10-27
Release date:2018-02-21
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Raman-markers of X-ray radiation damage of proteins.
Int. J. Biol. Macromol., 111, 2018

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon