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5MWI
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BU of 5mwi by Molmil
Crystal structure of G(CUG)8G duplex
Descriptor: RNA G(CUG)8C duplex, SULFATE ION
Authors:Kiliszek, A, Blaszczyk, L, Rypniewski, W.
Deposit date:2017-01-18
Release date:2017-03-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Stabilization of RNA hairpins using non-nucleotide linkers and circularization.
Nucleic Acids Res., 45, 2017
4YBZ
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BU of 4ybz by Molmil
Ca. Korarchaeum cryptofilum dinucleotide forming Acetyl-coenzyme A synthetase 1 in complex with ADP and with phosphorylated phosphohistidine segment (site I orientation)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, alpha subunit of Acyl-CoA synthetase (NDP forming), ...
Authors:Weisse, R.H.-J, Scheidig, A.J.
Deposit date:2015-02-19
Release date:2016-01-27
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of NDP-forming Acetyl-CoA synthetase ACD1 reveals a large rearrangement for phosphoryl transfer.
Proc.Natl.Acad.Sci.USA, 113, 2016
1XEP
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BU of 1xep by Molmil
Catechol in complex with T4 lysozyme L99A/M102Q
Descriptor: BETA-MERCAPTOETHANOL, CATECHOL, Lysozyme, ...
Authors:Graves, A.P, Brenk, R, Shoichet, B.K.
Deposit date:2004-09-10
Release date:2005-05-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Decoys for docking.
J.Med.Chem., 48, 2005
5F49
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BU of 5f49 by Molmil
Crystal structure of an aminoglycoside acetyltransferase meta-AAC0020 from an uncultured soil metagenomic sample in complex with malonyl-coenzyme A
Descriptor: COENZYME A, MAGNESIUM ION, MALONYL-COENZYME A, ...
Authors:Xu, Z, Skarina, T, Stogios, P.J, Yim, V, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-12-03
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and Functional Survey of Environmental Aminoglycoside Acetyltransferases Reveals Functionality of Resistance Enzymes.
ACS Infect Dis, 3, 2017
4YRB
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BU of 4yrb by Molmil
mouse TDH mutant R180K with NAD+ bound
Descriptor: L-threonine 3-dehydrogenase, mitochondrial, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:He, C, Li, F.
Deposit date:2015-03-14
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural insights on mouse l-threonine dehydrogenase: A regulatory role of Arg180 in catalysis
J.Struct.Biol., 192, 2015
6TAD
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BU of 6tad by Molmil
Bd0314 DslA E143Q mutant
Descriptor: SLT domain-containing protein
Authors:Lovering, A.L, Harding, C.J.
Deposit date:2019-10-29
Release date:2020-07-15
Last modified:2020-10-07
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:A lysozyme with altered substrate specificity facilitates prey cell exit by the periplasmic predator Bdellovibrio bacteriovorus.
Nat Commun, 11, 2020
7KW7
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BU of 7kw7 by Molmil
Atomic cryoEM structure of Hsp90-Hsp70-Hop-GR
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Glucocorticoid receptor, Heat shock 70 kDa protein 1A, ...
Authors:Wang, R.Y, Noddings, C.M, Kirschke, E, Myasnikov, A, Johnson, J.L, Agard, D.A.
Deposit date:2020-11-30
Release date:2021-12-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structure of Hsp90-Hsp70-Hop-GR reveals the Hsp90 client-loading mechanism.
Nature, 601, 2022
5ET4
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BU of 5et4 by Molmil
Structure of RNase A-K7H/R10H in complex with 3'-CMP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYTIDINE-3'-MONOPHOSPHATE, Ribonuclease pancreatic
Authors:Blanco, J.A, Salazar, V.A, Moussaoui, M, Boix, E.
Deposit date:2015-11-17
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Characterization of an RNase with two catalytic centers. Human RNase6 catalytic and phosphate-binding site arrangement favors the endonuclease cleavage of polymeric substrates.
Biochim Biophys Acta Gen Subj, 1863, 2019
2VRA
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BU of 2vra by Molmil
Drosophila Robo IG1-2 (monoclinic form)
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, ROUNDABOUT 1, SULFATE ION
Authors:Fukuhara, N, Howitt, J.A, Hussain, S, Hohenester, E.
Deposit date:2008-03-28
Release date:2008-04-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and Functional Analysis of Slit and Heparin Binding to Immunoglobulin-Like Domains 1 and 2 of Drosophila Robo
J.Biol.Chem., 283, 2008
5N3J
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BU of 5n3j by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-Nitrobenzoic acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-NITROBENZOIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
7KRJ
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BU of 7krj by Molmil
The GR-Maturation Complex: Glucocorticoid Receptor in complex with Hsp90 and co-chaperone p23
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, DEXAMETHASONE, Glucocorticoid receptor, ...
Authors:Noddings, C.M, Wang, Y.-R, Agard, D.A.
Deposit date:2020-11-20
Release date:2022-01-12
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:Structure of Hsp90-p23-GR reveals the Hsp90 client-remodelling mechanism.
Nature, 601, 2021
6TC2
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BU of 6tc2 by Molmil
Monoclinic human insulin in complex with p-coumaric acid
Descriptor: 4'-HYDROXYCINNAMIC ACID, Insulin, PHOSPHATE ION, ...
Authors:Triandafillidis, D.-P, Parthenios, N, Spiliopoulou, M, Valmas, A, Kosinas, C, Gozzo, F, Reinle-Schmitt, M, Beckers, D, Degen, T, Pop, M, Fitch, A, Wollenhaupt, J, Weiss, M.S, Karavassili, F, Margiolaki, I.
Deposit date:2019-11-04
Release date:2020-11-11
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Insulin polymorphism induced by two polyphenols: new crystal forms and advances in macromolecular powder diffraction.
Acta Crystallogr D Struct Biol, 76, 2020
7AE2
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BU of 7ae2 by Molmil
Crystal structure of HEPN(H107A-Y109F) toxin in complex with MNT antitoxin
Descriptor: HEPN toxin, MNT ANTITOXIN
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE6
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BU of 7ae6 by Molmil
Crystal structure of di-AMPylated HEPN(R102A) toxin
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, HEPN toxin
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
5N8P
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BU of 5n8p by Molmil
S-layer protein RsaA from C. crescentus
Descriptor: CALCIUM ION, S-layer protein
Authors:Bharat, T.A.M, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2017-02-24
Release date:2017-04-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the hexagonal surface layer on Caulobacter crescentus cells.
Nat Microbiol, 2, 2017
6ZWB
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BU of 6zwb by Molmil
Z-SBTub3 photoswitch bound to tubulin-DARPin D1 complex
Descriptor: 5-[2-(1,3-benzothiazol-2-yl)ethyl]-2-methoxy-phenol, Designed Ankyrin Repeat Protein (DARPIN) D1, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Wranik, M, Weinert, T, Olieric, N, Gao, L, Kraus, Y.C.M, Bingham, R, Ntouliou, E, Ahlfeld, J, Thorn-Seshold, O, Steinmetz, M.O, Standfuss, J.
Deposit date:2020-07-28
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.747 Å)
Cite:A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.
Cell Chem Biol, 28, 2021
5GAN
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BU of 5gan by Molmil
The overall structure of the yeast spliceosomal U4/U6.U5 tri-snRNP at 3.7 Angstrom
Descriptor: 13 kDa ribonucleoprotein-associated protein, GUANOSINE-5'-TRIPHOSPHATE, Pre-mRNA-processing factor 31, ...
Authors:Nguyen, T.H.D, Galej, W.P, Bai, X.C, Oubridge, C, Scheres, S.H.W, Newman, A.J, Nagai, K.
Deposit date:2015-12-15
Release date:2016-01-27
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structure of the yeast U4/U6.U5 tri-snRNP at 3.7 angstrom resolution.
Nature, 530, 2016
7X9X
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BU of 7x9x by Molmil
Thermotoga Maritima ferritin variant-Tm-E(G40E) with Zn
Descriptor: FE (III) ION, Ferritin, ZINC ION
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-16
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
7XA4
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BU of 7xa4 by Molmil
Thermotoga maritima ferritin variant-Tm-E (S111H) with Zn
Descriptor: Ferritin, ZINC ION
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-17
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
5GKO
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BU of 5gko by Molmil
Crystal structure of tripartite-type ABC transporter, MacB from Acinetobacter baumannii
Descriptor: Macrolide export ATP-binding/permease protein MacB
Authors:Murakami, S, Okada, U, Yamashita, E.
Deposit date:2016-07-04
Release date:2017-11-15
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (3.393 Å)
Cite:Crystal structure of tripartite-type ABC transporter MacB from Acinetobacter baumannii.
Nat Commun, 8, 2017
7A5X
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BU of 7a5x by Molmil
Two copies of the catalytic domain of NanA sialidase from Streptococcus pneumoniae juxtaposed in the P212121 space group, in complex with DANA derivatized with a PEG linker on the glycerol group.
Descriptor: (4~{S},5~{R},6~{R})-5-acetamido-6-[(1~{R},2~{S})-3-[[1-(2-ethoxyethyl)-1,2,3-triazol-4-yl]methylsulfanyl]-1,2-bis(oxidanyl)propyl]-4-oxidanyl-oxane-2-carboxylic acid, CALCIUM ION, CHLORIDE ION, ...
Authors:Bridot, C, Bouckaert, J.
Deposit date:2020-08-24
Release date:2020-11-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Polyvalent Transition-State Analogues of Sialyl Substrates Strongly Inhibit Bacterial Sialidases*.
Chemistry, 27, 2021
7A6B
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BU of 7a6b by Molmil
1.33 A structure of human apoferritin obtained from Titan Mono- BCOR microscope
Descriptor: Ferritin heavy chain, SODIUM ION
Authors:Yip, K.M, Fischer, N, Chari, A, Stark, H.
Deposit date:2020-08-25
Release date:2020-09-02
Last modified:2021-02-10
Method:ELECTRON MICROSCOPY (1.33 Å)
Cite:Atomic-resolution protein structure determination by cryo-EM.
Nature, 587, 2020
7XA2
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BU of 7xa2 by Molmil
Thermotoga maritima ferritin variant-Tm-E(S111H)
Descriptor: FE (III) ION, Ferritin
Authors:Liu, Y, Zhao, G.
Deposit date:2022-03-16
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Directed Self-Assembly of Dimeric Building Blocks into Networklike Protein Origami to Construct Hydrogels.
Acs Nano, 16, 2022
4Y6W
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BU of 4y6w by Molmil
Crystal structure of Podosopora anserina putative kinesin light chain nearly identical TPR-like repeats
Descriptor: NaB(AB)3ACb - light chain TPR-like repeats
Authors:Marold, J.D, Kavran, J.M, Bowman, G.D, Barrick, D.
Deposit date:2015-02-13
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.587 Å)
Cite:A Naturally Occurring Repeat Protein with High Internal Sequence Identity Defines a New Class of TPR-like Proteins.
Structure, 23, 2015
5NCR
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BU of 5ncr by Molmil
OH1 from the Orf virus: a tyrosine phosphatase that displays distinct structural features and triple substrate specificity
Descriptor: PHOSPHATE ION, SULFATE ION, tyrosine phosphatase
Authors:Segovia, D, Haouz, A, Berois, M, Villarino, A, Andre-Leroux, G.
Deposit date:2017-03-06
Release date:2017-08-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:OH1 from Orf Virus: A New Tyrosine Phosphatase that Displays Distinct Structural Features and Triple Substrate Specificity.
J. Mol. Biol., 429, 2017

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PDB entries from 2024-07-17

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