PDB: 1861 resultsInfo pagesStatus searchChemie searchBIRD

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6T8D	The cytotoxin MakB from Vibrio cholerae Descriptor: MakB, SULFATE ION Authors: Persson, K, Nagampalli, R. Deposit date: 2019-10-24 Release date: 2020-11-18 Last modified: 2021-12-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A tripartite cytolytic toxin formed by Vibrio cholerae proteins with flagellum-facilitated secretion. Proc.Natl.Acad.Sci.USA, 118, 2021
6TAO	The cytotoxin MakE from Vibrio cholerae Descriptor: NICKEL (II) ION, Non-hemolytic enterotoxin lytic component L1, SULFATE ION Authors: Persson, K, Nagampalli, R, Heidler, T, Wai, S.N. Deposit date: 2019-10-30 Release date: 2020-11-18 Last modified: 2021-12-01 Method: X-RAY DIFFRACTION (1.98 Å) Cite: A tripartite cytolytic toxin formed by Vibrio cholerae proteins with flagellum-facilitated secretion. Proc.Natl.Acad.Sci.USA, 118, 2021
6U8Q	CryoEM structure of HIV-1 cleaved synaptic complex (CSC) intasome Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Li, M, Chen, X, Craigie, R. Deposit date: 2019-09-05 Release date: 2020-02-05 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (4.67 Å) Cite: A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies. J.Mol.Biol., 432, 2020
8B7S	Crystal structure of the Chloramphenicol-inactivating oxidoreductase from Novosphingobium sp Descriptor: Chloramphenicol-inactivating oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Zhang, L, Toplak, M, Saleem-Batcha, R, Hoeing, L, Jakob, R.P, Jehmlich, N, von Bergen, M, Maier, T, Teufel, R. Deposit date: 2022-10-03 Release date: 2022-11-16 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Bacterial Dehydrogenases Facilitate Oxidative Inactivation and Bioremediation of Chloramphenicol. Chembiochem, 24, 2023
6VDK	CryoEM structure of HIV-1 conserved Intasome Core Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Li, M, Chen, X, Craigie, R. Deposit date: 2019-12-27 Release date: 2020-02-05 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: A Peptide Derived from Lens Epithelium-Derived Growth Factor Stimulates HIV-1 DNA Integration and Facilitates Intasome Structural Studies. J.Mol.Biol., 432, 2020
4PYP	Crystal structure of the human glucose transporter GLUT1 Descriptor: Solute carrier family 2, facilitated glucose transporter member 1, nonyl beta-D-glucopyranoside Authors: Deng, D, Yan, C.Y, Xu, C, Wu, J.P, Sun, P.C, Hu, M.X, Yan, N. Deposit date: 2014-03-27 Release date: 2014-05-21 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.166 Å) Cite: Crystal structure of the human glucose transporter GLUT1 Nature, 510, 2014
6E3R	Structure of human DNA polymerase beta complexed with 8OA as the template base in a 1-nucleotide gapped DNA Descriptor: DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-14 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.26 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
6E3V	Structure of human DNA polymerase beta complexed with 8OA in the template base paired with incoming non-hydrolyzable TTP Descriptor: 5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]thymidine, DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-15 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.96 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
6E3W	Structure of human DNA polymerase beta complexed with 8OA in the template base paired with incoming non-hydrolyzable GTP Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(A38) P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-07-15 Release date: 2019-04-03 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (2.02 Å) Cite: Mutagenic Replication of the Major Oxidative Adenine Lesion 7,8-Dihydro-8-oxoadenine by Human DNA Polymerases. J. Am. Chem. Soc., 141, 2019
5T7D	Crystal structure of Streptomyces hygroscopicus bialaphos resistance (BAR) protein in complex with acetyl coenzyme A Descriptor: ACETATE ION, ACETYL COENZYME *A, Phosphinothricin N-acetyltransferase Authors: Christ, B, Weng, J.K. Deposit date: 2016-09-04 Release date: 2017-06-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Non-specific activities of the major herbicide-resistance gene BAR. Nat Plants, 3, 2017
5T7E	Crystal structure of Streptomyces hygroscopicus Bialaphos Resistance (BAR) protein in complex with Coenzyme A and L-phosphinothricin Descriptor: COENZYME A, PHOSPHINOTHRICIN, Phosphinothricin N-acetyltransferase, ... Authors: Christ, B, Weng, J.K. Deposit date: 2016-09-04 Release date: 2017-06-07 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Non-specific activities of the major herbicide-resistance gene BAR. Nat Plants, 3, 2017
1O6V	Internalin (INLA, Listeria monocytogenes) - functional domain, uncomplexed Descriptor: CALCIUM ION, INTERNALIN A Authors: Schubert, W.-D, Urbanke, C, Ziehm, T, Beier, V, Machner, M.P, Domann, E, Wehland, J, Chakraborty, T, Heinz, D.W. Deposit date: 2002-10-16 Release date: 2002-12-23 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structure of Internalin, a Major Invasion Protein of Listeria Monocytogenes, in Complex with its Human Receptor E-Cadherin Cell(Cambridge,Mass.), 111, 2002
2NBR	The Solution Structure of Human gammaC-crystallin Descriptor: Gamma-crystallin C Authors: Dixit, K, Pande, A, Pande, J, Sarma, S.P. Deposit date: 2016-03-12 Release date: 2016-06-01 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Nuclear Magnetic Resonance Structure of a Major Lens Protein, Human gamma C-Crystallin: Role of the Dipole Moment in Protein Solubility. Biochemistry, 55, 2016
4M64	3D crystal structure of Na+/melibiose symporter of Salmonella typhimurium Descriptor: Melibiose carrier protein Authors: Ethayathulla, A.S, Guan, L. Deposit date: 2013-08-08 Release date: 2014-01-15 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.35 Å) Cite: Structure-based mechanism for Na(+)/melibiose symport by MelB. Nat Commun, 5, 2014
3N1Y	X-ray Crystal Structure of Toluene/o-Xylene Monooxygenase Hydroxylase T201G Mutant Descriptor: FE (III) ION, GLYCEROL, HEXAETHYLENE GLYCOL, ... Authors: McCormick, M.S, Sazinsky, M.H, Lippard, S.J. Deposit date: 2010-05-17 Release date: 2010-10-13 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Active Site Threonine Facilitates Proton Transfer during Dioxygen Activation at the Diiron Center of Toluene/o-Xylene Monooxygenase Hydroxylase. J.Am.Chem.Soc., 132, 2010
3N1Z	X-ray Crystal Structure of Toluene/o-Xylene Monooxygenase Hydroxylase T201S Mutant Descriptor: FE (III) ION, GLYCEROL, HEXAETHYLENE GLYCOL, ... Authors: McCormick, M.S, Sazinsky, M.H, Lippard, S.J. Deposit date: 2010-05-17 Release date: 2010-10-13 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Active Site Threonine Facilitates Proton Transfer during Dioxygen Activation at the Diiron Center of Toluene/o-Xylene Monooxygenase Hydroxylase. J.Am.Chem.Soc., 132, 2010
3N20	X-ray Crystal Structure of Toluene/o-Xylene Monooxygenase Hydroxylase T201V Mutant Descriptor: FE (III) ION, GLYCEROL, HEXAETHYLENE GLYCOL, ... Authors: McCormick, M.S, Sazinsky, M.H, Lippard, S.J. Deposit date: 2010-05-17 Release date: 2010-10-13 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Active Site Threonine Facilitates Proton Transfer during Dioxygen Activation at the Diiron Center of Toluene/o-Xylene Monooxygenase Hydroxylase. J.Am.Chem.Soc., 132, 2010
3N1X	X-ray Crystal Structure of Toluene/o-Xylene Monooxygenase Hydroxylase T201C Mutant Descriptor: 1,2-ETHANEDIOL, FE (III) ION, HYDROXIDE ION, ... Authors: Sazinsky, M.H, McCormick, M.S, Lippard, S.J. Deposit date: 2010-05-17 Release date: 2010-10-13 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Active Site Threonine Facilitates Proton Transfer during Dioxygen Activation at the Diiron Center of Toluene/o-Xylene Monooxygenase Hydroxylase. J.Am.Chem.Soc., 132, 2010
6QIX	The crystal structure of Trichuris muris p43 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ... Authors: Levy, C.W. Deposit date: 2019-01-21 Release date: 2019-06-12 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.65 Å) Cite: The major secreted protein of the whipworm parasite tethers to matrix and inhibits interleukin-13 function. Nat Commun, 10, 2019
6CRH	Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable GTP Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... Authors: Koag, M.-C, Lee, S. Deposit date: 2018-03-17 Release date: 2019-03-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.327 Å) Cite: Promutagenicity of 8-Chloroguanine, A Major Inflammation-Induced Halogenated DNA Lesion. Molecules, 24, 2019
5G52	Crystallographic structure of full particle of Deformed Wing Virus Descriptor: URIDINE-5'-MONOPHOSPHATE, VP1, VP2, ... Authors: Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P. Deposit date: 2016-05-18 Release date: 2017-03-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (3.802 Å) Cite: Structure of deformed wing virus, a major honey bee pathogen. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5G51	High resolution structure of the part of VP3 protein of Deformed Wing Virus forming P-domain Descriptor: DWV-VP3-P-DOMAIN Authors: Skubnik, K, Novacek, J, Fuzik, T, Pridal, A, Paxton, R, Plevka, P. Deposit date: 2016-05-18 Release date: 2017-03-22 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Structure of deformed wing virus, a major honey bee pathogen. Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6EJG	CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 4 Descriptor: CD81 antigen, SINGLE CHAIN FV FRAGMENT Authors: Harris, S.F, Wong, A, Kuglstatter, A. Deposit date: 2017-09-21 Release date: 2018-05-30 Last modified: 2018-06-20 Method: X-RAY DIFFRACTION (2.82 Å) Cite: Structure-Guided Combinatorial Engineering Facilitates Affinity and Specificity Optimization of Anti-CD81 Antibodies. J. Mol. Biol., 430, 2018
7X1B	Crystal structure of peptide KAGQVVTI in complex with HLA-B5801 Descriptor: Beta-2-microglobulin, GLYCEROL, HLA-B, ... Authors: Huan, X, Ren, E.C. Deposit date: 2022-02-23 Release date: 2023-05-03 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.399 Å) Cite: Allopurinol non-covalently facilitates binding of unconventional peptides to HLA-B*58:01. Sci Rep, 13, 2023
7WZZ	Crystal structure of peptide KAGQVVTIW in complex with HLA-B5801 Descriptor: Beta-2-microglobulin, GLYCEROL, LYS-ALA-GLY-GLN-VAL-VAL-THR-ILE-TRP, ... Authors: Huan, X, Ren, E.C. Deposit date: 2022-02-20 Release date: 2023-05-03 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.305 Å) Cite: Allopurinol non-covalently facilitates binding of unconventional peptides to HLA-B*58:01. Sci Rep, 13, 2023

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