Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5APD
DownloadVisualize
BU of 5apd by Molmil
Hen Egg White Lysozyme not illuminated with 0.4THz radiation
Descriptor: LYSOZYME C, SODIUM ION
Authors:Lundholm, I, Rodilla, H, Wahlgren, W.Y, Duelli, A, Bourenkov, G, Vukusic, J, Friedman, R, Stake, J, Schneider, T, Katona, G.
Deposit date:2015-09-15
Release date:2016-01-13
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Terahertz Radiation Induces Non-Thermal Structural Changes Associated with Frohlich Condensation in a Protein Crystal
Struct.Dyn., 2, 2015
5APM
DownloadVisualize
BU of 5apm by Molmil
Multiple capsid-stabilizing protein-RNA and protein-protein interactions revealed in a high-resolution structure of an emerging picornavirus causing neonatal sepsis
Descriptor: VP0, VP1, VP3
Authors:Shakeel, S, Westerhuis, B.M, Domanska, A, Koning, R.I, Matadeen, R, Koster, A.J, Bakker, A.Q, Beaumont, T, Wolthers, K.C, Butcher, S.J.
Deposit date:2015-09-17
Release date:2016-07-27
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Multiple Capsid-Stabilizing Interactions Revealed in a High-Resolution Structure of an Emerging Picornavirus Causing Neonatal Sepsis
Nat.Commun., 7, 2016
5LGO
DownloadVisualize
BU of 5lgo by Molmil
Trypsin inhibitors for the treatment of pancreatitis - cpd 15
Descriptor: (2~{S},4~{S})-1-[4-(aminomethyl)-3-methoxy-phenyl]carbonyl-4-[4-(2-cyclopropylethoxy)-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidin-7-yl]-~{N}-methyl-pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Schiering, N, D'Arcy, A.
Deposit date:2016-07-07
Release date:2016-08-10
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Trypsin inhibitors for the treatment of pancreatitis.
Bioorg.Med.Chem.Lett., 26, 2016
5LH8
DownloadVisualize
BU of 5lh8 by Molmil
Trypsin inhibitors for the treatment of pancreatitis - cpd 8
Descriptor: (2~{S},4~{S})-1-[4-(aminomethyl)-3-methoxy-phenyl]carbonyl-4-(4-cyclopropyl-1,2,3-triazol-1-yl)-~{N}-[(1~{S},2~{R})-2-phenylcyclohexyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic trypsin, ...
Authors:Schiering, N, D'Arcy, A, Skaanderup, P, Simic, O, Brandl, T, Woelcke, J.
Deposit date:2016-07-08
Release date:2016-08-10
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Trypsin inhibitors for the treatment of pancreatitis.
Bioorg.Med.Chem.Lett., 26, 2016
5LI6
DownloadVisualize
BU of 5li6 by Molmil
Crystal structure of Mycobacterium tuberculosis CYP126A1 in complex with N-isopropyl-N-((3-(4-methoxyphenyl)-1,2,4-oxadiazol-5-yl)methyl)-2-(4-nitrophenyl)acetamide
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Putative cytochrome P450 126, ~{N}-[[3-(4-methoxyphenyl)-1,2,4-oxadiazol-5-yl]methyl]-2-(4-nitrophenyl)-~{N}-propan-2-yl-ethanamide
Authors:Levy, C, Munro, A.W, Leys, D.
Deposit date:2016-07-14
Release date:2016-12-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Characterization and Ligand/Inhibitor Identification Provide Functional Insights into the Mycobacterium tuberculosis Cytochrome P450 CYP126A1.
J. Biol. Chem., 292, 2017
5B29
DownloadVisualize
BU of 5b29 by Molmil
The 1.28A structure of human FABP3 F16V mutant complexed with palmitic acid at room temperature
Descriptor: Fatty acid-binding protein, heart, PALMITIC ACID
Authors:Matsuoka, D, Sugiyama, S, Kakinouchi, K, Niiyama, M, Murata, M, Matsuoka, S.
Deposit date:2016-01-12
Release date:2017-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:The 1.28A structure of human FABP3 F16V mutant complexed with palmitic acid at room temperature.
To Be Published
5LIN
DownloadVisualize
BU of 5lin by Molmil
Lysozyme, collected at rotation 1 degree per second
Descriptor: CHLORIDE ION, Lysozyme C
Authors:Casanas, A, Finke, A, Wang, M.
Deposit date:2016-07-15
Release date:2016-08-03
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.496 Å)
Cite:EIGER detector: application in macromolecular crystallography.
Acta Crystallogr D Struct Biol, 72, 2016
8H4X
DownloadVisualize
BU of 8h4x by Molmil
Structure of cleaved Serpin B9
Descriptor: 1,2-ETHANEDIOL, Serpin B9, ZINC ION
Authors:Zhou, A, Yan, T.
Deposit date:2022-10-11
Release date:2023-10-25
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Expression, purification and crystallization of cleaved Serpin B9
To Be Published
5B06
DownloadVisualize
BU of 5b06 by Molmil
Lysozyme (denatured by NaOD and refolded)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Kita, A, Morimoto, Y.
Deposit date:2015-10-28
Release date:2016-01-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An Effective Deuterium Exchange Method for Neutron Crystal Structure Analysis with Unfolding-Refolding Processes
Mol Biotechnol., 58, 2016
5B1G
DownloadVisualize
BU of 5b1g by Molmil
Crystal structure of hen egg-white lysozyme
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Sugahara, M, Suzuki, M, Nango, E.
Deposit date:2015-12-03
Release date:2016-12-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of hen egg-white lysozyme
To Be Published
8H8V
DownloadVisualize
BU of 8h8v by Molmil
Room-temperature structure of lysozyme by pink-beam serial crystallography (100 ms, edge)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kim, Y, Nam, K.H.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.
Data Brief, 52, 2024
5AQX
DownloadVisualize
BU of 5aqx by Molmil
Fragment-based screening of HSP70 sheds light on the functional role of ATP-binding site residues
Descriptor: (1R,2S,3R,5R)-3-((5-(benzyloxy)quinazolin-4-yl)amino)-5-(hydroxymethyl)cyclopentane-1,2-diol, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Jones, A.M, Westwood, I.M, Osborne, J.D, Matthews, T.P, Cheeseman, M.D, Rowlands, M.G, Jeganathan, F, Burke, R, Lee, D, Kadi, N, Liu, M, Richards, M, McAndrew, C, Yahya, N, Dobson, S.E, Jones, K, Workman, P, Collins, I, van Montfort, R.L.M.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:A fragment-based approach applied to a highly flexible target: Insights and challenges towards the inhibition of HSP70 isoforms.
Sci Rep, 6, 2016
8H8U
DownloadVisualize
BU of 8h8u by Molmil
Room-temperature structure of lysozyme by pink-beam serial crystallography (50 ms, center)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kim, Y, Nam, K.H.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.
Data Brief, 52, 2024
8H7P
DownloadVisualize
BU of 8h7p by Molmil
Crystal structure of aqualigase bound with Suc-AAPF
Descriptor: 5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, CALCIUM ION, Subtilisin, ...
Authors:Li, H, Ma, M.Z, Zhang, L.J, Dai, L, Chen, C.-C, Guo, R.-T.
Deposit date:2022-10-20
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Crystal structure of aqualigase bound with Suc-AAPF
To Be Published
5B59
DownloadVisualize
BU of 5b59 by Molmil
Hen egg-white lysozyme modified with a keto-ABNO.
Descriptor: (2~{S})-2-azanyl-3-[(2~{R},3~{S})-2-oxidanyl-3-[[(1~{S},5~{R})-3-oxidanylidene-9-azabicyclo[3.3.1]nonan-9-yl]oxy]-1,2-dihydroindol-3-yl]propanal, Lysozyme C
Authors:Sasaki, D, Seki, Y, Sohma, Y, Oisaki, K, Kanai, M.
Deposit date:2016-04-28
Release date:2016-09-14
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Transition Metal-Free Tryptophan-Selective Bioconjugation of Proteins
J.Am.Chem.Soc., 138, 2016
8H8T
DownloadVisualize
BU of 8h8t by Molmil
Room-temperature structure of lysozyme by pink-beam serial crystallography (50 ms, edge)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kim, Y, Nam, K.H.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.
Data Brief, 52, 2024
8H7O
DownloadVisualize
BU of 8h7o by Molmil
Crystal structure of aqualigase
Descriptor: CALCIUM ION, ISOPROPYL ALCOHOL, Subtilisin
Authors:Li, H, Ma, M.Z, Zhang, L.J, Dai, L, Chen, C.-C, Guo, R.-T.
Deposit date:2022-10-20
Release date:2023-11-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of aqualigase
To Be Published
8H8W
DownloadVisualize
BU of 8h8w by Molmil
Room-temperature structure of lysozyme by pink-beam serial crystallography (100 ms, center)
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Kim, Y, Nam, K.H.
Deposit date:2022-10-24
Release date:2023-11-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Data of pink-beam serial synchrotron crystallography at the Pohang Light Source II.
Data Brief, 52, 2024
5M0P
DownloadVisualize
BU of 5m0p by Molmil
Crystal structure of cytochrome P450 OleT F79A in complex with arachidonic acid
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, SODIUM ION, Terminal olefin-forming fatty acid decarboxylase, ...
Authors:Tee, K.L, Munro, A, Matthews, S, Leys, D, Levy, C.
Deposit date:2016-10-05
Release date:2017-01-11
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Catalytic Determinants of Alkene Production by the Cytochrome P450 Peroxygenase OleTJE.
J. Biol. Chem., 292, 2017
8HKD
DownloadVisualize
BU of 8hkd by Molmil
Crystal structure of P450BSbeta-L78G/Q85F/F173S/G290I variant in complex with palmitoleic acid
Descriptor: DI(HYDROXYETHYL)ETHER, Fatty-acid peroxygenase, PALMITOLEIC ACID, ...
Authors:He, C, Wang, X, Li, F.
Deposit date:2022-11-25
Release date:2023-11-08
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Biocatalytic enantioselective gamma-C-H lactonization of aliphatic carboxylic acids
Nat Synth, 2023
8HGB
DownloadVisualize
BU of 8hgb by Molmil
Crystal structure of the CYP199A4 mutant F182G in complex with 3-hydroxy-4-methoxybenzoic acid
Descriptor: 4-methoxy-3-oxidanyl-benzoic acid, Cytochrome P450, GLYCEROL, ...
Authors:Jiang, Y, Cong, Z.
Deposit date:2022-11-14
Release date:2023-11-22
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystal structure of the CYP199A4 mutant F182G in complex with 3-hydroxy-4-methoxybenzoic acid
To Be Published
5LIS
DownloadVisualize
BU of 5lis by Molmil
Insulin solved by Native SAD from a dataset collected in one second
Descriptor: Insulin
Authors:Casanas, A, Finke, A, Wang, M.
Deposit date:2016-07-15
Release date:2016-08-03
Last modified:2016-09-28
Method:X-RAY DIFFRACTION (2.293 Å)
Cite:EIGER detector: application in macromolecular crystallography.
Acta Crystallogr D Struct Biol, 72, 2016
8HNI
DownloadVisualize
BU of 8hni by Molmil
hnRNP A2/B1 RRMs in complex with telomeric DNA
Descriptor: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*T)-3'), Heterogeneous nuclear ribonucleoproteins A2/B1
Authors:Liu, Y, Abula, A, Xiao, H, Guo, H, Li, T, Zheng, L, Chen, B, Nguyen, H, Ji, X.
Deposit date:2022-12-07
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.644 Å)
Cite:Structural Insight Into hnRNP A2/B1 Homodimerization and DNA Recognition.
J.Mol.Biol., 435, 2023
5LJ9
DownloadVisualize
BU of 5lj9 by Molmil
Structure of the E. coli MacB ABC domain (C2221)
Descriptor: Macrolide export ATP-binding/permease protein MacB
Authors:Crow, A.
Deposit date:2016-07-18
Release date:2017-11-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanotransmission mechanism of the MacB ABC transporter superfamily.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5AZQ
DownloadVisualize
BU of 5azq by Molmil
Crystal structure of cyano-cobalt(III) tetradehydrocorrin in the heme pocket of horse heart myoglobin
Descriptor: (1R,19R) cobalt tetradehydrocorrin, (1S,19S) cobalt tetradehydrocorrin, CYANIDE ION, ...
Authors:Mizohata, E, Morita, Y, Oohora, K, Inoue, T, Hayashi, T.
Deposit date:2015-10-21
Release date:2016-01-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structures and Coordination Behavior of Aqua- and Cyano-Co(III) Tetradehydrocorrins in the Heme Pocket of Myoglobin
Inorg.Chem., 55, 2016

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon