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9FJU
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Structure of the DNase I- and phalloidin-bound pointed end of F-actin (conformer 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Actin, ...
Authors:Boiero Sanders, M, Oosterheert, W, Hofnagel, O, Bieling, P, Raunser, S.
Deposit date:2024-05-31
Release date:2024-09-11
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.84 Å)
Cite:Phalloidin and DNase I-bound F-actin pointed end structures reveal principles of filament stabilization and disassembly.
Nat Commun, 15, 2024
9FJN
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Solution NMR structure of a peptide encompassing residues 2-19 of the human formin INF2
Descriptor: Inverted formin-2
Authors:Jimenez, M.A, Comas, L, Labat-de-Hoz, L, Correas, I, Alonso, M.A.
Deposit date:2024-05-31
Release date:2024-09-11
Method:SOLUTION NMR
Cite:Structure and function of the N-terminal extension of the formin INF2.
Cell Mol Life Sci, 79, 2022
9FJE
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Expanded formalin inactivated CVB1
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Plavec, Z, Butcher, S.J.
Deposit date:2024-05-31
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.01 Å)
Cite:Comparison of structure and immunogenicity of CVB1-VLP and inactivated CVB1 vaccine candidates.
Res Sq, 2024
9FJD
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BU of 9fjd by Molmil
Expanded CVB1-VLP (Tween80)
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3
Authors:Plavec, Z, Butcher, S.J.
Deposit date:2024-05-31
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:Comparison of structure and immunogenicity of CVB1-VLP and inactivated CVB1 vaccine candidates.
Res Sq, 2024
9FJC
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BU of 9fjc by Molmil
Compact CVB1-VLP (Tween80)
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Plavec, Z, Butcher, S.J.
Deposit date:2024-05-30
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (2.15 Å)
Cite:Comparison of structure and immunogenicity of CVB1-VLP and inactivated CVB1 vaccine candidates.
Res Sq, 2024
9FJ4
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Structure of ubiquitin bound to coiled coil-UIM form 1
Descriptor: 3-[1-(2-oxidanylideneethyl)-1,2,3-triazol-4-yl]propanal, GLU-GLN-GLU-ILE-GLU-GLU-LEU-GLU-ILE-GLU-ILE-ALA-ILE-LEU-LEU-SER-GLU-ILE-GLU-GLY, LYS-GLN-LYS-ILE-ALA-ALA-LEU-LYS-TYR-LYS-ILE-ALA-ALA-LEU-LYS-GLN-LYS-ILE-GLN, ...
Authors:Paredes Vergara, P, Huang, D.T.
Deposit date:2024-05-30
Release date:2024-09-18
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:An engineered ubiquitin binding coiled coil peptide.
Chem Sci, 2024
9FJ3
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Structure of ubiquitin bound of coiled-coil UIM form 2
Descriptor: 3-[1-(2-oxidanylideneethyl)-1,2,3-triazol-4-yl]propanal, GLU-GLN-GLU-ILE-GLU-GLU-LEU-GLU-ILE-GLU-ILE-ALA-ILE-LEU-LEU-SER-GLU-ILE-GLU-GLY, LYS-GLN-LYS-ILE-ALA-ALA-LEU-LYS-TYR-LYS-ILE-ALA-ALA-LEU-LYS-GLN-LYS-ILE, ...
Authors:Paredes Vergara, P, Huang, D.T.
Deposit date:2024-05-30
Release date:2024-09-18
Last modified:2024-10-02
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:An engineered ubiquitin binding coiled coil peptide.
Chem Sci, 2024
9FIL
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Crystal Structure of reduced NuoEF variant E222K(NuoF) from Aquifex aeolicus bound to NAD+
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-29
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FIJ
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Crystal Structure of reduced NuoEF variant E222K(NuoF) from Aquifex aeolicus
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-29
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FII
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BU of 9fii by Molmil
Crystal Structure of oxidized NuoEF variant E222K(NuoF) from Aquifex aeolicus
Descriptor: CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-29
Release date:2024-07-17
Last modified:2024-08-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FIH
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BU of 9fih by Molmil
Crystal Structure of NuoEF variant P228R(NuoF) from Aquifex aeolicus bound to NADH under anoxic conditions after 10 min soaking
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-29
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FIF
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BU of 9fif by Molmil
Crystal Structure of NuoEF variant P228R(NuoF) from Aquifex aeolicus bound to NADH under anoxic conditions
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-29
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FI9
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BU of 9fi9 by Molmil
Human PIF + Z48847594 (OCCUPANCY 0.7)
Descriptor: ATP-dependent DNA helicase PIF1, MAGNESIUM ION, N-[4-(2-amino-1,3-thiazol-4-yl)phenyl]acetamide, ...
Authors:Bax, B.D, Sanders, C.M, Antson, A.A, Brandao-Neto, J.
Deposit date:2024-05-28
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.727 Å)
Cite:Structure-based discovery of first inhibitors targeting the helicase activity of human PIF1
Nucleic Acids Research, 2024
9FHP
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BU of 9fhp by Molmil
CryoEM structure of wild-type Turnip Yellows Virus
Descriptor: Minor capsid readthrough protein
Authors:Trapani, S, Lai Kee Him, J, Hoh, F, Brault, V, Bron, P.
Deposit date:2024-05-28
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (4.08 Å)
Cite:CryoEM structure of wild-type Turnip Yellows Virus
To Be Published
9FHE
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BU of 9fhe by Molmil
hKHK-C in complex with BI-9787 (pH 5.5)
Descriptor: (2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid, Ketohexokinase
Authors:Ebenhoch, R, Pautsch, A.
Deposit date:2024-05-27
Release date:2024-09-04
Method:X-RAY DIFFRACTION (2.313 Å)
Cite:Discovery of BI-9787, a potent zwitterionic ketohexokinase inhibitor with oral bioavailability.
Bioorg.Med.Chem.Lett., 112, 2024
9FHD
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hKHK-C in fomplex with BI-9787
Descriptor: (2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid, Ketohexokinase, SULFATE ION
Authors:Ebenhoch, R, Pautsch, A.
Deposit date:2024-05-27
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.845 Å)
Cite:Discovery of BI-9787, a potent zwitterionic ketohexokinase inhibitor with oral bioavailability.
Bioorg.Med.Chem.Lett., 112, 2024
9FGN
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BU of 9fgn by Molmil
Coxsackievirus A9 bound with compound 18 (CL304)
Descriptor: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
Authors:Plavec, Z, Butcher, S.J, Mitchell, C, Buckner, C.
Deposit date:2024-05-24
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:SAR Analysis of Novel Coxsackie virus A9 Capsid Binders.
J.Med.Chem., 2024
9FEF
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BU of 9fef by Molmil
Cryo-EM structure of Trypanosoma cruzi (MDH)4-PEX5 complex
Descriptor: Peroxisome targeting signal 1 receptor, malate dehydrogenase
Authors:Lipinski, O, Sonani, R.R, Blat, A, Jemiola-Rzeminska, M, Patel, S.N, Sood, T, Dubin, G.
Deposit date:2024-05-19
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Cryo-EM structure of Trypanosoma cruzi (MDH)4-PEX5 complex
To Be Published
9FEE
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BU of 9fee by Molmil
Cryo-EM structure of Trypanosoma cruzi glycosomal malate dehydrogenase
Descriptor: malate dehydrogenase
Authors:Lipinski, O, Sonani, R.R, Blat, A, Jemiola-Rzeminska, M, Patel, S.N, Sood, T, Dubin, G.
Deposit date:2024-05-19
Release date:2024-05-29
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Cryo-EM structure of Trypanosoma cruzi glycosomal malate dehydrogenase
To Be Published
9FEB
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BU of 9feb by Molmil
Short-chain dehydrogenase/reductase (SDR) from Thermus caliditerrae in complex with NADP
Descriptor: MAGNESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SDR family oxidoreductase
Authors:Kapur, B, Nar, H.
Deposit date:2024-05-17
Release date:2024-06-26
Method:X-RAY DIFFRACTION (1.698 Å)
Cite:In silico enzyme screening identifies an SDR ketoreductase from Thermus caliditerrae as an attractive biocatalyst and promising candidate for protein engineering
Front Chem Biol, 2024
9FEA
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BU of 9fea by Molmil
Crystal Structure of reduced NuoEF variant P228R(NuoF) from Aquifex aeolicus bound to NAD+
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-17
Release date:2024-07-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FE8
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BU of 9fe8 by Molmil
Crystal Structure of reduced NuoEF variant P228R(NuoF) from Aquifex aeolicus
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-17
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FE7
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BU of 9fe7 by Molmil
Crystal Structure of oxidized NuoEF variant P228R(NuoF) from Aquifex aeolicus
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-17
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FE5
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BU of 9fe5 by Molmil
Crystal Structure of NuoEF variant R66G(NuoF) from Aquifex aeolicus bound to NADH under anoxic conditions after 10 min soaking
Descriptor: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-17
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024
9FE0
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BU of 9fe0 by Molmil
Crystal Structure of reduced NuoEF variant R66G(NuoF) from Aquifex aeolicus bound to NAD+
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Wohlwend, D, Friedrich, T, Goeppert-Asadollahpour, S.
Deposit date:2024-05-17
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Biochim Biophys Acta Bioenerg, 1865, 2024

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PDB entries from 2024-10-09

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