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9FHD

hKHK-C in fomplex with BI-9787

This is a non-PDB format compatible entry.
Summary for 9FHD
Entry DOI10.2210/pdb9fhd/pdb
DescriptorKetohexokinase, SULFATE ION, (2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid, ... (4 entities in total)
Functional Keywordskinase, sugar kinase, ketohexokinase, fructokinase, co-structure, sugar binding protein
Biological sourceHomo sapiens (human)
Total number of polymer chains2
Total formula weight69420.52
Authors
Ebenhoch, R.,Pautsch, A. (deposition date: 2024-05-27, release date: 2024-09-04)
Primary citationHeine, N.,Weber, A.,Pautsch, A.,Gottschling, D.,Uphues, I.,Bauer, M.,Ebenhoch, R.,Magarkar, A.,Nosse, B.,Kley, J.T.
Discovery of BI-9787, a potent zwitterionic ketohexokinase inhibitor with oral bioavailability.
Bioorg.Med.Chem.Lett., 112:129930-129930, 2024
Cited by
PubMed Abstract: Fructose metabolism by ketohexokinase (KHK) is implicated in a variety of metabolic disorders. KHK inhibition is a potential therapeutic strategy for the treatment of diseases including diabetes, non-alcoholic fatty liver disease, and non-alcoholic steatohepatitis. The first small-molecule KHK-inhibitors have entered clinical trials, but it remains unclear if systemic inhibition of KHK by small-molecules will eventually benefit patients. Here we report the discovery of BI-9787, a potent, zwitterionic KHK inhibitor characterized by high permeability and favorable oral rat pharmacokinetics. BI-9787 was identified by optimizing chemical starting points generated via a ligand-based virtual screening of Boehringer's virtual library of synthetically accessible compounds (BICLAIM). It serves as a high-quality in vitro and in vivo tool compound for investigating the role of fructose metabolism in disease.
PubMed: 39179180
DOI: 10.1016/j.bmcl.2024.129930
PDB entries with the same primary citation
Experimental method
X-RAY DIFFRACTION (1.845 Å)
Structure validation

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PDB entries from 2024-11-13

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