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6G83
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BU of 6g83 by Molmil
Crystal structure of M. tuberculosis DprE1 in complex with sPBTZ169 (sulfonylPBTZ)
Descriptor: Decaprenylphosphoryl-beta-D-ribose oxidase, FLAVIN-ADENINE DINUCLEOTIDE, [2-(4-cyclohexylsulfonylpiperazin-1-yl)-4-oxidanylidene-6-(trifluoromethyl)-1,3-benzothiazin-8-yl]-oxidanylidene-azanium
Authors:Piton, J, Makarov, V, Cole, S.T.
Deposit date:2018-04-07
Release date:2018-08-01
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Based Drug Design and Characterization of Sulfonyl-Piperazine Benzothiazinone Inhibitors of DprE1 from Mycobacterium tuberculosis.
Antimicrob. Agents Chemother., 62, 2018
5BTC
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BU of 5btc by Molmil
Crystal structure of a topoisomerase II complex
Descriptor: 1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID, DNA gyrase subunit A, DNA gyrase subunit B, ...
Authors:Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
Deposit date:2015-06-02
Release date:2016-03-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
3N8S
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BU of 3n8s by Molmil
Crystal Structure of BlaC-E166A covalently bound with Cefamandole
Descriptor: (2R)-2-[(1R)-1-{[(2R)-2-hydroxy-2-phenylacetyl]amino}-2-oxoethyl]-5-{[(1-methyl-1H-tetrazol-5-yl)sulfanyl]methyl}-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Beta-lactamase, PHOSPHATE ION
Authors:Tremblay, L.W, Blanchard, J.S.
Deposit date:2010-05-28
Release date:2010-11-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the Michaelis Complex (1.2 A) and the Covalent Acyl Intermediate (2.0 A) of Cefamandole Bound in the Active Sites of the Mycobacterium tuberculosis beta-Lactamase K73A and E166A Mutants.
Biochemistry, 49, 2010
5BMW
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BU of 5bmw by Molmil
Crystal structure of T75V mutant of Triosephosphate isomerase from Plasmodium falciparum
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Bandyopadhyay, D, Murthy, M.R.N, Balaram, H, Balaram, P.
Deposit date:2015-05-23
Release date:2015-07-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Probing the role of highly conserved residues in triosephosphate isomerase - analysis of site specific mutants at positions 64 and 75 in the Plasmodial enzyme
Febs J., 282, 2015
6GD0
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BU of 6gd0 by Molmil
Trypanosoma brucei PTR1 in complex with inhibitor 4g (F133)
Descriptor: ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Pteridine reductase, ...
Authors:Landi, G, Pozzi, C, Mangani, S.
Deposit date:2018-04-20
Release date:2019-04-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Enhancement of Benzothiazoles as Pteridine Reductase-1 Inhibitors for the Treatment of Trypanosomatidic Infections.
J.Med.Chem., 62, 2019
5BTF
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BU of 5btf by Molmil
Crystal structure of a topoisomerase II complex
Descriptor: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
Authors:Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
Deposit date:2015-06-03
Release date:2016-03-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
5BTD
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BU of 5btd by Molmil
Crystal structure of a topoisomerase II complex
Descriptor: 1-cyclopropyl-6-fluoro-8-methoxy-7-[(3S)-3-methylpiperazin-1-yl]-4-oxo-1,4-dihydroquinoline-3-carboxylic acid, DNA gyrase subunit A, DNA gyrase subunit B, ...
Authors:Blower, T.R, Williamson, B.H, Kerns, R.J, Berger, J.M.
Deposit date:2015-06-03
Release date:2016-03-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Crystal structure and stability of gyrase-fluoroquinolone cleaved complexes from Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.USA, 113, 2016
3N46
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BU of 3n46 by Molmil
Human FPPS complex with NOV_980 and zoledronic acid/MG2+
Descriptor: (2R)-1-[(benzyloxy)carbonyl]-2,3-dihydro-1H-indole-2-carboxylic acid, FARNESYL PYROPHOSPHATE SYNTHASE, MAGNESIUM ION, ...
Authors:Rondeau, J.-M.
Deposit date:2010-05-21
Release date:2010-08-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Allosteric non-bisphosphonate FPPS inhibitors identified by fragment-based discovery.
Nat.Chem.Biol., 6, 2010
6MBD
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BU of 6mbd by Molmil
Human Mcl-1 in complex with the designed peptide dM1
Descriptor: Induced myeloid leukemia cell differentiation protein Mcl-1, ZINC ION, dM1
Authors:Jenson, J.M, Keating, A.E.
Deposit date:2018-08-29
Release date:2019-03-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Tertiary Structural Motif Sequence Statistics Enable Facile Prediction and Design of Peptides that Bind Anti-apoptotic Bfl-1 and Mcl-1.
Structure, 27, 2019
5BWU
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BU of 5bwu by Molmil
X-RAY CRYSTAL STRUCTURE AT 2.17A RESOLUTION OF HUMAN MITOCHONDRIAL BRANCHED CHAIN AMINOTRANSFERASE (BCATM) COMPLEXED WITH A TRIAZOLOPYRIMIDINONE COMPOUND AND AN INTERNAL ALDIMINE LINKED PLP COFACTOR.
Descriptor: 1,2-ETHANEDIOL, 2-[(4-bromobenzyl)amino]-5-propyl[1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one, Branched-chain-amino-acid aminotransferase, ...
Authors:Somers, D.O.
Deposit date:2015-06-08
Release date:2015-07-01
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:The Discovery of in Vivo Active Mitochondrial Branched-Chain Aminotransferase (BCATm) Inhibitors by Hybridizing Fragment and HTS Hits.
J.Med.Chem., 58, 2015
6C00
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BU of 6c00 by Molmil
Solution structure of translation initiation factor 1 from Clostridium difficile
Descriptor: Translation initiation factor IF-1
Authors:Zhang, Y, Aguilar, F.
Deposit date:2017-12-26
Release date:2019-01-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:1H,13C and15N resonance assignments and structure prediction of translation initiation factor 1 from Clostridium difficile.
Biomol.Nmr Assign., 13, 2019
6CDM
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BU of 6cdm by Molmil
Structure of vaccine-elicited HIV-1 neutralizing antibody vFP7.04 in complex with HIV-1 fusion peptide residue 512-519
Descriptor: HIV fusion peptide (512-519), vFP7.04 heavy chain, vFP7.04 light chain
Authors:Xu, K, Liu, K, Kwong, P.D.
Deposit date:2018-02-08
Release date:2018-05-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.408 Å)
Cite:Epitope-based vaccine design yields fusion peptide-directed antibodies that neutralize diverse strains of HIV-1.
Nat. Med., 24, 2018
5EUJ
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BU of 5euj by Molmil
PYRUVATE DECARBOXYLASE FROM ZYMOBACTER PALMAE
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Pyruvate decarboxylase, ...
Authors:Buddrus, L, Crennell, S.J, Leak, D.J, Danson, M.J, Andrews, E.S.V, Arcus, V.L.
Deposit date:2015-11-18
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of pyruvate decarboxylase from Zymobacter palmae.
Acta Crystallogr.,Sect.F, 72, 2016
5V6M
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BU of 5v6m by Molmil
Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A3 in complex with V3 peptide ConB
Descriptor: CALCIUM ION, Envelope glycoprotein gp120 V3 peptide of Con B sequence, Heavy chain of Fab fragment of rabbit anti-HIV1 gp120 V3 mAb 10A3, ...
Authors:Pan, R, Kong, X.-P.
Deposit date:2017-03-17
Release date:2018-01-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Increased epitope complexity correlated with antibody affinity maturation and a novel binding mode revealed by structures of rabbit antibodies against the third variable loop (V3) of HIV-1 gp120.
J. Virol., 2018
5V82
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BU of 5v82 by Molmil
PIM1 kinase in complex with Cpd17 (1-(6-(4,4-difluoropiperidin-3-yl)pyridin-2-yl)-6-(6-methylpyrazin-2-yl)-1H-pyrazolo[4,3-c]pyridine)
Descriptor: 1-{6-[(3R)-4,4-difluoropiperidin-3-yl]pyridin-2-yl}-6-(6-methylpyrazin-2-yl)-1H-pyrazolo[4,3-c]pyridine, Serine/threonine-protein kinase pim-1
Authors:Murray, J.M, Wallweber, H.
Deposit date:2017-03-21
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.888 Å)
Cite:Discovery of 5-Azaindazole (GNE-955) as a Potent Pan-Pim Inhibitor with Optimized Bioavailability.
J. Med. Chem., 60, 2017
3WTN
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BU of 3wtn by Molmil
Crystal Structure of Lymnaea stagnalis Acetylcholine Binding Protein Complexed with Desnitro-imidacloprid
Descriptor: (2Z)-1-[(6-chloropyridin-3-yl)methyl]imidazolidin-2-imine, Acetylcholine-binding protein, CADMIUM ION, ...
Authors:Okajima, T, Ihara, M, Yamashita, A, Oda, T, Matsuda, K.
Deposit date:2014-04-11
Release date:2015-02-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Studies on an acetylcholine binding protein identify a basic residue in loop G on the beta 1 strand as a new structural determinant of neonicotinoid actions
Mol.Pharmacol., 86, 2014
4OLJ
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BU of 4olj by Molmil
Crystal structure of Arg119Gln mutant of Peptidyl-tRNA Hydrolase from Acinetobacter Baumannii at 1.49 A resolution
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Peptidyl-tRNA hydrolase
Authors:Sikarwar, J, Dube, D, Kaushik, S, Sinha, M, Kaur, P, Sharma, S, Singh, T.P.
Deposit date:2014-01-24
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Crystal structure of Arg119Gln mutant of Peptidyl-tRNA hydrolase from Acinetobacter Baumannii at 1.49 A resolution
to be published
6N99
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BU of 6n99 by Molmil
Xylose isomerase 2F1 variant from Streptomyces sp. F-1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, SULFATE ION, ...
Authors:Miyamoto, R.Y, Vieira, P.S, Murakami, M.T, Zanphorlin, L.M.
Deposit date:2018-12-01
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes.
Biochim Biophys Acta Gen Subj, 1864, 2020
6CW1
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BU of 6cw1 by Molmil
Crystal structure of Neurexin-1 alpha ectodomain fragment, L2-L3
Descriptor: Neurexin-1
Authors:Misra, A, Rudenko, G.
Deposit date:2018-03-29
Release date:2018-09-19
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Structural Plasticity of Neurexin 1 alpha : Implications for its Role as Synaptic Organizer.
J. Mol. Biol., 430, 2018
5BWC
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BU of 5bwc by Molmil
ACETYLCHOLINESTERASE (E.C. 3.1.1.7) FROM TORPEDO CALIFORNICA IN COMPLEX WITH THE BIS-PYRIDINIUM OXIME ORTHO-7
Descriptor: 1,7-HEPTYLENE-BIS-N,N'-SYN-2-PYRIDINIUMALDOXIME, 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase
Authors:Legler, P.M, Millard, C.B.
Deposit date:2015-06-07
Release date:2015-09-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A conformational change in the peripheral anionic site of Torpedo californica acetylcholinesterase induced by a bis-imidazolium oxime.
Acta Crystallogr.,Sect.D, 71, 2015
6CZN
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BU of 6czn by Molmil
Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Z2OHTPE and a glucocorticoid receptor-interacting protein 1 NR box II peptide
Descriptor: 4,4'-[(1R,2R)-1-phenylbutane-1,2-diyl]diphenol, Estrogen receptor, GRIP Peptide
Authors:Fanning, S.W, Han, R, Maximov, P, Jordan, V.C, Greene, G.L.
Deposit date:2018-04-09
Release date:2019-03-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Estrogen Receptor Alpha Ligand Binding Domain Y537S Mutant in Complex with Z2OHTPE and a glucocorticoid receptor-interacting protein 1 NR box II peptide
To Be Published
5C9L
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BU of 5c9l by Molmil
Crystal structure of native PLL lectin from Photorhabdus luminescens at 1.65 A resolution
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
Authors:Kumar, A, Sykorova, P, Demo, G, Dobes, P, Hyrsl, P, Wimmerova, M.
Deposit date:2015-06-27
Release date:2016-10-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Novel Fucose-binding Lectin from Photorhabdus luminescens (PLL) with an Unusual Heptabladed beta-Propeller Tetrameric Structure.
J.Biol.Chem., 291, 2016
1N4F
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BU of 1n4f by Molmil
Para-Arsanilate Derivative of Hen Egg-White Lysozyme
Descriptor: 1,2-ETHANEDIOL, 4-AMINOPHENYLARSONIC ACID, Lysozyme C, ...
Authors:Retailleau, P, Prange, T.
Deposit date:2002-10-31
Release date:2003-05-06
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Phasing power at the K absorption edge of organic arsenic.
Acta Crystallogr.,Sect.D, 59, 2003
4MTA
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BU of 4mta by Molmil
Crystal structure of Pim-1 kinase domain in complex with 2-methyl-5-phenylfuran-3-carboxylic acid
Descriptor: 2-methyl-5-phenylfuran-3-carboxylic acid, GLYCEROL, Serine/threonine-protein kinase pim-1
Authors:Scheufler, C, Be, C.
Deposit date:2013-09-19
Release date:2015-01-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Large scale meta-analysis of fragment-based screening campaigns: privileged fragments and complementary technologies.
J Biomol Screen, 20, 2015
5VYT
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BU of 5vyt by Molmil
Crystal structure of the WbkC N-formyltransferase (F142A variant) from Brucella melitensis
Descriptor: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, Gdp-mannose 4,6-dehydratase / gdp-4-amino-4,6-dideoxy-d-mannose formyltransferase, ...
Authors:Riegert, A.S, Chantigian, D.P, Thoden, J.B, Holden, H.M.
Deposit date:2017-05-26
Release date:2017-07-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biochemical Characterization of WbkC, an N-Formyltransferase from Brucella melitensis.
Biochemistry, 56, 2017

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