Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7UL6
DownloadVisualize
BU of 7ul6 by Molmil
CryoEM structure of full-length dimeric ClbP
Descriptor: Beta-lactamase
Authors:Velilla, J.A, Walsh Jr, R.M, Gaudet, R.
Deposit date:2022-04-04
Release date:2022-09-28
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structural basis of colibactin activation by the ClbP peptidase.
Nat.Chem.Biol., 19, 2023
3ZWJ
DownloadVisualize
BU of 3zwj by Molmil
CRYSTAL STRUCTURE OF THE PORE-FORMING TOXIN FRAC FROM ACTINIA FRAGACEA (Form 3)
Descriptor: FRAGACEATOXIN C
Authors:Mechaly, A.E, Bellomioa, A, Morantea, K, Gonzalez-Manas, J.M, Guerin, D.M.A.
Deposit date:2011-08-01
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Pores of the Toxin Frac Assemble Into 2D Hexagonal Clusters in Both Crystal Structures and Model Membranes.
J.Struct.Biol., 180, 2012
3ZWG
DownloadVisualize
BU of 3zwg by Molmil
Crystal structure of the pore-forming toxin FraC from Actinia fragacea (form 2)
Descriptor: FRAGACEATOXIN C
Authors:Mechaly, A.E, Bellomio, A, Morante, K, Gonzalez-Manas, J.M, Guerin, D.M.A.
Deposit date:2011-07-29
Release date:2012-07-04
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Pores of the Toxin Frac Assemble Into 2D Hexagonal Clusters in Both Crystal Structures and Model Membranes.
J.Struct.Biol., 180, 2012
4JE7
DownloadVisualize
BU of 4je7 by Molmil
Crystal structure of a human-like mitochondrial peptide deformylase in complex with actinonin
Descriptor: ACTINONIN, Peptide deformylase 1A, chloroplastic/mitochondrial, ...
Authors:Fieulaine, S, Meinnel, T, Giglione, C.
Deposit date:2013-02-26
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Understanding the highly efficient catalysis of prokaryotic peptide deformylases by shedding light on the determinants specifying the low activity of the human counterpart.
Acta Crystallogr.,Sect.D, 70, 2014
6J0H
DownloadVisualize
BU of 6j0h by Molmil
Crystal structure of Actinomycin D- d(TTGGCGAA) complex
Descriptor: Actinomycin D, DNA (5'-D(P*TP*TP*GP*GP*CP*GP*AP*A)-3'), SODIUM ION
Authors:Satange, R.B, Hou, M.H.
Deposit date:2018-12-24
Release date:2019-07-24
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
2ROQ
DownloadVisualize
BU of 2roq by Molmil
Solution Structure of the thiolation-thioesterase di-domain of enterobactin synthetase component F
Descriptor: Enterobactin synthetase component F
Authors:Frueh, D.P, Arthanari, H, Koglin, A, Vosburg, D.A, Bennett, A.E, Walsh, C.T, Wagner, G.
Deposit date:2008-04-05
Release date:2008-08-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Dynamic thiolation-thioesterase structure of a non-ribosomal peptide synthetase
Nature, 454, 2008
2RH4
DownloadVisualize
BU of 2rh4 by Molmil
Actinorhodin ketoreductase, actKR, with NADPH and Inhibitor Emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, Actinorhodin Polyketide Ketoreductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korman, T.P, Tsai, S.-C.
Deposit date:2007-10-05
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Inhibition kinetics and emodin cocrystal structure of a type II polyketide ketoreductase
Biochemistry, 47, 2008
2RHC
DownloadVisualize
BU of 2rhc by Molmil
Actinorhodin ketordeuctase, actKR, with NADP+ and Inhibitor Emodin
Descriptor: 3-METHYL-1,6,8-TRIHYDROXYANTHRAQUINONE, Actinorhodin Polyketide Ketoreductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Korman, T.P, Tsai, S.-C.
Deposit date:2007-10-08
Release date:2008-08-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition kinetics and emodin cocrystal structure of a type II polyketide ketoreductase
Biochemistry, 47, 2008
2OPT
DownloadVisualize
BU of 2opt by Molmil
Crystal Structure of Apo ActR from Streptomyces coelicolor.
Descriptor: ActII protein
Authors:Willems, A.R, Junop, M.S.
Deposit date:2007-01-30
Release date:2008-02-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of the Streptomyces coelicolor TetR-like protein ActR alone and in complex with actinorhodin or the actinorhodin biosynthetic precursor (S)-DNPA.
J.Mol.Biol., 376, 2008
2M6L
DownloadVisualize
BU of 2m6l by Molmil
Solution structure of the Escherichia coli holo ferric enterobactin binding protein
Descriptor: Ferrienterobactin-binding periplasmic protein
Authors:Chu, B.C.H, Otten, R, Krewulak, K.D, Mulder, F.A.A, Vogel, H.J.
Deposit date:2013-04-05
Release date:2014-04-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure, binding properties, and dynamics of the bacterial siderophore-binding protein FepB.
J.Biol.Chem., 289, 2014
2M6K
DownloadVisualize
BU of 2m6k by Molmil
Solution structure of the Escherichia coli apo ferric enterobactin binding protein
Descriptor: Ferrienterobactin-binding periplasmic protein
Authors:Chu, B.C.H, Otten, R, Krewulak, K.D, Mulder, F.A.A, Vogel, H.J.
Deposit date:2013-04-05
Release date:2014-04-30
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure, binding properties, and dynamics of the bacterial siderophore-binding protein FepB.
J.Biol.Chem., 289, 2014
3XIM
DownloadVisualize
BU of 3xim by Molmil
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
Descriptor: COBALT (II) ION, D-XYLOSE ISOMERASE, sorbitol
Authors:Mrabet, N.T, Van Denbroek, A, Van Den Brande, I, Stanssens, P, Laroche, Y, Lambeir, A.-M, Matthyssens, G, Jenkins, J, Chiadmi, M, Vantilbeurgh, H, Rey, F, Janin, J, Quax, W.J, Lasters, I, Demaeyer, M, Wodak, S.J.
Deposit date:1991-05-29
Release date:1993-04-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arginine residues as stabilizing elements in proteins.
Biochemistry, 31, 1992
2APS
DownloadVisualize
BU of 2aps by Molmil
CU/ZN SUPEROXIDE DISMUTASE FROM ACTINOBACILLUS PLEUROPNEUMONIAE
Descriptor: COPPER (II) ION, PROTEIN (CU,ZN SUPEROXIDE DISMUTASE), ZINC ION
Authors:Forest, K.T, Langford, P.R, Kroll, J.S, Getzoff, E.D.
Deposit date:1999-02-11
Release date:1999-02-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cu,Zn superoxide dismutase structure from a microbial pathogen establishes a class with a conserved dimer interface.
J.Mol.Biol., 296, 2000
6H1B
DownloadVisualize
BU of 6h1b by Molmil
Structure of amide bond synthetase Mcba K483A mutant from Marinactinospora thermotolerans
Descriptor: 1-ethanoyl-9~{H}-pyrido[3,4-b]indole-3-carboxylic acid, ADENOSINE MONOPHOSPHATE, Fatty acid CoA ligase
Authors:Rowlinson, B, Petchey, M, Cuetos, A, Frese, A, Dannevald, S, Grogan, G.
Deposit date:2018-07-11
Release date:2018-09-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Broad Aryl Acid Specificity of the Amide Bond Synthetase McbA Suggests Potential for the Biocatalytic Synthesis of Amides.
Angew. Chem. Int. Ed. Engl., 57, 2018
1XIM
DownloadVisualize
BU of 1xim by Molmil
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
Descriptor: COBALT (II) ION, D-XYLOSE ISOMERASE, Xylitol
Authors:Mrabet, N.T, Van Denbroek, A, Van Den Brande, I, Stanssens, P, Laroche, Y, Lambeir, A.-M, Matthyssens, G, Jenkins, J, Chiadmi, M, Vantilbeurgh, H, Rey, F, Janin, J, Quax, W.J, Lasters, I, Demaeyer, M, Wodak, S.J.
Deposit date:1991-05-29
Release date:1993-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Arginine residues as stabilizing elements in proteins.
Biochemistry, 31, 1992
4DR9
DownloadVisualize
BU of 4dr9 by Molmil
Crystal structure of a peptide deformylase from synechococcus elongatus in complex with actinonin
Descriptor: ACTINONIN, BROMIDE ION, Peptide deformylase, ...
Authors:Lorimer, D, Abendroth, J, Craig, T, Burgin, A, Segall, A, Rohwler, F.
Deposit date:2012-02-17
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and function of a cyanophage-encoded peptide deformylase.
ISME J, 7, 2013
2XIM
DownloadVisualize
BU of 2xim by Molmil
ARGININE RESIDUES AS STABILIZING ELEMENTS IN PROTEINS
Descriptor: D-XYLOSE ISOMERASE, MAGNESIUM ION, Xylitol
Authors:Mrabet, N.T, Van Denbroek, A, Van Den Brande, I, Stanssens, P, Laroche, Y, Lambeir, A.-M, Matthyssens, G, Jenkins, J, Chiadmi, M, Vantilbeurgh, H, Rey, F, Janin, J, Quax, W.J, Lasters, I, Demaeyer, M, Wodak, S.J.
Deposit date:1991-05-29
Release date:1993-04-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Arginine residues as stabilizing elements in proteins.
Biochemistry, 31, 1992
3ZXX
DownloadVisualize
BU of 3zxx by Molmil
Structure of self-cleaved protease domain of PatA
Descriptor: SUBTILISIN-LIKE PROTEIN
Authors:Koehnke, J, Zollman, D, Vendome, J, Raab, A, Houssen, W.E, Smith, M.C, Jaspars, M, Naismith, J.H.
Deposit date:2011-08-16
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Discovery of New Cyanobactins from Cyanothece Pcc 7425 Defines a New Signature for Processing of Patellamides.
Chembiochem, 13, 2012
3ZXY
DownloadVisualize
BU of 3zxy by Molmil
Structure of S218A mutant of the protease domain of PatA
Descriptor: SUBTILISIN-LIKE PROTEIN
Authors:Koehnke, J, Zollman, D, Vendome, J, Raab, A, Houssen, W.E, Smith, M.C, Jaspars, M, Naismith, J.H.
Deposit date:2011-08-16
Release date:2012-08-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The Discovery of New Cyanobactins from Cyanothece Pcc 7425 Defines a New Signature for Processing of Patellamides.
Chembiochem, 13, 2012
6JC7
DownloadVisualize
BU of 6jc7 by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Ala
Descriptor: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine, ACETIC ACID, CrmG, ...
Authors:Xu, J, Su, K, Liu, J.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition.
Commun Biol, 3, 2020
6JC9
DownloadVisualize
BU of 6jc9 by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Gln
Descriptor: ACETIC ACID, CrmG, GLUTAMINE, ...
Authors:Xu, J, Liu, J.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition.
Commun Biol, 3, 2020
6JCB
DownloadVisualize
BU of 6jcb by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in C2 space group
Descriptor: CrmG
Authors:Xu, J, Liu, J.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition.
Commun Biol, 3, 2020
6JC8
DownloadVisualize
BU of 6jc8 by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in complex with amino donor L-Glu
Descriptor: (E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-glutamic acid, CrmG, GLYCEROL
Authors:Xu, J, Liu, J.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition.
Commun Biol, 3, 2020
7DZ9
DownloadVisualize
BU of 7dz9 by Molmil
MbnABC complex
Descriptor: FE (III) ION, MbnA, MbnB, ...
Authors:Chao, D, Dan, Z, Yijun, G, Wei, C.
Deposit date:2021-01-25
Release date:2022-03-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and catalytic mechanism of the MbnBC holoenzyme required for methanobactin biosynthesis.
Cell Res., 32, 2022
6JCA
DownloadVisualize
BU of 6jca by Molmil
Crystal structure of aminotransferase CrmG from Actinoalloteichus sp. WH1-2216-6 in I222 space group
Descriptor: CHLORIDE ION, CrmG, GLYCEROL, ...
Authors:Xu, J, Liu, J.
Deposit date:2019-01-28
Release date:2020-02-05
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural studies reveal flexible roof of active site responsible for omega-transaminase CrmG overcoming by-product inhibition.
Commun Biol, 3, 2020

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon