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2PB1
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Exo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
Descriptor: 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside, 2-deoxy-2-fluoro-alpha-D-glucopyranose, Hypothetical protein XOG1
Authors:Cutfield, S.M, Cutfield, J.F, Davies, G.J, Sullivan, P.A.
Deposit date:2007-03-28
Release date:2007-04-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Exo-B-(1,3)-Glucanase from Candida Albicans in complex with unhydrolysed and covalently linked 2,4-dinitrophenyl-2-deoxy-2-fluoro-B-D-glucopyranoside at 1.9 A
To be Published
2PWH
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BU of 2pwh by Molmil
Crystal structure of the trehalulose synthase MutB from Pseudomonas mesoacidophila MX-45
Descriptor: CALCIUM ION, Sucrose isomerase
Authors:Ravaud, S, Robert, X, Haser, R, Aghajari, N.
Deposit date:2007-05-11
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Trehalulose synthase native and carbohydrate complexed structures provide insights into sucrose isomerization.
J.Biol.Chem., 61, 2007
1XOT
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BU of 1xot by Molmil
Catalytic Domain Of Human Phosphodiesterase 4B In Complex With Vardenafil
Descriptor: 2-{2-ETHOXY-5-[(4-ETHYLPIPERAZIN-1-YL)SULFONYL]PHENYL}-5-METHYL-7-PROPYLIMIDAZO[5,1-F][1,2,4]TRIAZIN-4(1H)-ONE, MAGNESIUM ION, ZINC ION, ...
Authors:Card, G.L, England, B.P, Suzuki, Y, Fong, D, Powell, B, Lee, B, Luu, C, Tabrizizad, M, Gillette, S, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-10-06
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structural Basis for the Activity of Drugs that Inhibit Phosphodiesterases.
STRUCTURE, 12, 2004
2NC9
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BU of 2nc9 by Molmil
Apo solution structure of Hop TPR2A
Descriptor: Stress-induced-phosphoprotein 1
Authors:Darby, J.F, Vidler, L.R, Simpson, P.J, Matthews, S.J, Sharp, S.Y, Pearl, L.H, Hoelder, S, Workman, P.
Deposit date:2016-03-23
Release date:2017-03-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the Hop TPR2A domain and investigation of target druggability by NMR, biochemical and in silico approaches.
Sci Rep, 10, 2020
1XMU
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BU of 1xmu by Molmil
Catalytic Domain Of Human Phosphodiesterase 4B In Complex With Roflumilast
Descriptor: 3-(CYCLOPROPYLMETHOXY)-N-(3,5-DICHLOROPYRIDIN-4-YL)-4-(DIFLUOROMETHOXY)BENZAMIDE, MAGNESIUM ION, ZINC ION, ...
Authors:Card, G.L, England, B.P, Suzuki, Y, Fong, D, Powell, B, Lee, B, Luu, C, Tabrizizad, M, Gillette, S, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the Activity of Drugs that Inhibit Phosphodiesterases.
STRUCTURE, 12, 2004
1XOQ
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BU of 1xoq by Molmil
Catalytic Domain Of Human Phosphodiesterase 4D In Complex With Roflumilast
Descriptor: 1,2-ETHANEDIOL, 3-(CYCLOPROPYLMETHOXY)-N-(3,5-DICHLOROPYRIDIN-4-YL)-4-(DIFLUOROMETHOXY)BENZAMIDE, MAGNESIUM ION, ...
Authors:Card, G.L, England, B.P, Suzuki, Y, Fong, D, Powell, B, Lee, B, Luu, C, Tabrizizad, M, Gillette, S, Ibrahim, P.N, Artis, D.R, Bollag, G, Milburn, M.V, Kim, S.-H, Schlessinger, J, Zhang, K.Y.J.
Deposit date:2004-10-06
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Structural Basis for the Activity of Drugs that Inhibit Phosphodiesterases.
STRUCTURE, 12, 2004
2NDB
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BU of 2ndb by Molmil
NMR structure of omega-agatoxin IVA in DPC micelles
Descriptor: Omega-agatoxin-Aa4a
Authors:Ryu, J.H, Kim, J.I.
Deposit date:2016-05-12
Release date:2017-09-13
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure-activity relationships of omega-Agatoxin IVA in lipid membranes
Biochem. Biophys. Res. Commun., 482, 2017
2MRF
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BU of 2mrf by Molmil
NMR structure of the ubiquitin-binding zinc finger (UBZ) domain from human Rad18
Descriptor: E3 ubiquitin-protein ligase RAD18, ZINC ION
Authors:Rizzo, A.A, Salerno, P.E, Bezsonova, I, Korzhnev, D.M.
Deposit date:2014-07-03
Release date:2014-10-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR Structure of the Human Rad18 Zinc Finger in Complex with Ubiquitin Defines a Class of UBZ Domains in Proteins Linked to the DNA Damage Response.
Biochemistry, 53, 2014
2ANJ
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BU of 2anj by Molmil
Crystal Structure of the Glur2 Ligand Binding Core (S1S2J-Y450W) Mutant in Complex With the Partial Agonist Kainic Acid at 2.1 A Resolution
Descriptor: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, Glutamate receptor 2
Authors:Holm, M.M, Naur, P, Vestergaard, B, Geballe, M.T, Gajhede, M, Kastrup, J.S, Traynelis, S.F, Egebjerg, J.
Deposit date:2005-08-11
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Binding Site Tyrosine Shapes Desensitization Kinetics and Agonist Potency at GluR2: a mutagenic, kinetic, and crystallographic study
J.Biol.Chem., 280, 2005
7MKO
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BU of 7mko by Molmil
Escherichia coli RNA polymerase elongation complex
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Qayyum, M.Z, Murakami, K.S.
Deposit date:2021-04-26
Release date:2021-06-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli.
J.Biol.Chem., 297, 2021
7MKN
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Escherichia coli RNA polymerase and RapA elongation complex
Descriptor: 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ...
Authors:Qayyum, M.Z, Murakami, K.S.
Deposit date:2021-04-26
Release date:2021-06-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli.
J.Biol.Chem., 297, 2021
7MKQ
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Escherichia coli RNA polymerase and RapA binary complex
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Qayyum, M.Z, Murakami, K.S.
Deposit date:2021-04-26
Release date:2021-06-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli.
J.Biol.Chem., 297, 2021
7MKP
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BU of 7mkp by Molmil
Escherichia coli RNA polymerase core enzyme
Descriptor: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ...
Authors:Qayyum, M.Z, Murakami, K.S.
Deposit date:2021-04-26
Release date:2021-06-23
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structural basis of RNA polymerase recycling by the Swi2/Snf2 family of ATPase RapA in Escherichia coli.
J.Biol.Chem., 297, 2021
7M5M
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PCNA bound to peptide mimetic
Descriptor: N-BUTANE, Peptide mimetic (ACE)RQCSMTCFYHSK(NH2) with linker, Proliferating cell nuclear antigen
Authors:Vandborg, B.A, Bruning, J.B.
Deposit date:2021-03-24
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:A cell permeable bimane-constrained PCNA-interacting peptide.
Rsc Chem Biol, 2, 2021
7M5L
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BU of 7m5l by Molmil
PCNA bound to peptide mimetic with linker
Descriptor: PROPANE, Peptide mimetic (ACE)RQCSMTCFYHSK(NH2) with linker, Proliferating cell nuclear antigen
Authors:Vandborg, B.A, Bruning, J.B.
Deposit date:2021-03-24
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3 Å)
Cite:A cell permeable bimane-constrained PCNA-interacting peptide.
Rsc Chem Biol, 2, 2021
7M5N
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BU of 7m5n by Molmil
PCNA bound to peptide mimetic with linker
Descriptor: 1,3-dimethylbenzene, Peptide mimetic (ACE)RQCSMTCFYHSK(NH2) with linker, Proliferating cell nuclear antigen
Authors:Vandborg, B.A, Bruning, J.B.
Deposit date:2021-03-24
Release date:2021-08-11
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:A cell permeable bimane-constrained PCNA-interacting peptide.
Rsc Chem Biol, 2, 2021
7NOY
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BU of 7noy by Molmil
Crystal structure of the heterocyclic toxin methyltransferase from Mycobacterium tuberculosis in complex with substrate 1-hydroxyquinolin-4(1H)-one
Descriptor: 1-oxidanylquinolin-4-one, S-ADENOSYL-L-HOMOCYSTEINE, SODIUM ION, ...
Authors:Denkhaus, L, Sartor, P, Einsle, O, Gerhardt, S, Fetzner, S.
Deposit date:2021-02-26
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of O-methylation of (2-heptyl-)1-hydroxyquinolin-4(1H)-one and related compounds by the heterocyclic toxin methyltransferase Rv0560c of Mycobacterium tuberculosis.
J.Struct.Biol., 213, 2021
7NMK
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BU of 7nmk by Molmil
Crystal structure of the heterocyclic toxin methyltransferase from Mycobacterium tuberculosis with bound methylation product 1-methoxyquinolin-4(1H)-one
Descriptor: 1-methoxy-4-oxoquinoline, 2-heptyl-1-hydroxyquinolin-4(1H)-one methyltransferase, FORMIC ACID, ...
Authors:Denkhaus, L, Sartor, P, Einsle, O, Gerhardt, S, Fetzner, S.
Deposit date:2021-02-23
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.204 Å)
Cite:Structural basis of O-methylation of (2-heptyl-)1-hydroxyquinolin-4(1H)-one and related compounds by the heterocyclic toxin methyltransferase Rv0560c of Mycobacterium tuberculosis.
J.Struct.Biol., 213, 2021
7NDM
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BU of 7ndm by Molmil
Crystal structure of the heterocyclic toxin methyltransferase from Mycobacterium tuberculosis with bound substrate 4-hydroxyisoquinolin-1(2H)-one
Descriptor: 4-oxidanyl-2~{H}-isoquinolin-1-one, Heterocyclic toxin methyltransferase (Rv0560c), MALONATE ION, ...
Authors:Denkhaus, L, Sartor, P, Einsle, O, Gerhardt, S, Fetzner, S.
Deposit date:2021-02-02
Release date:2021-09-22
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structural basis of O-methylation of (2-heptyl-)1-hydroxyquinolin-4(1H)-one and related compounds by the heterocyclic toxin methyltransferase Rv0560c of Mycobacterium tuberculosis.
J.Struct.Biol., 213, 2021
5MEE
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BU of 5mee by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304V
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Arachidonate 15-lipoxygenase, FE (III) ION, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
5MEG
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BU of 5meg by Molmil
Manganese-substituted Cyanothece lipoxygenase 2 (Mn-CspLOX2)
Descriptor: Arachidonate 15-lipoxygenase, CHLORIDE ION, ETHANOL, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
4M80
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BU of 4m80 by Molmil
The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans at 1.85A resolution
Descriptor: EXO-1,3-BETA-GLUCANASE
Authors:Nakatani, Y, Cutfield, S.M, Larsen, D.S, Cutfield, J.F.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.858 Å)
Cite:Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase.
Biochemistry, 53, 2014
5MEF
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BU of 5mef by Molmil
Cyanothece lipoxygenase 2 (CspLOX2) variant - L304F
Descriptor: Arachidonate 15-lipoxygenase, CHLORIDE ION, FE (III) ION, ...
Authors:Newie, J, Neumann, P, Werner, M, Mata, R.A, Ficner, R, Feussner, I.
Deposit date:2016-11-14
Release date:2017-05-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.357 Å)
Cite:Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
Sci Rep, 7, 2017
4M81
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BU of 4m81 by Molmil
The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans complexed with 1-fluoro-alpha-D-glucopyranoside (donor) and p-nitrophenyl beta-D-glucopyranoside (acceptor) at 1.86A resolution
Descriptor: 4-nitrophenyl beta-D-glucopyranoside, EXO-1,3-BETA-GLUCANASE, GLYCEROL, ...
Authors:Nakatani, Y, Cutfield, S.M, Larsen, D.S, Cutfield, J.F.
Deposit date:2013-08-12
Release date:2014-06-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Major Change in Regiospecificity for the Exo-1,3-beta-glucanase from Candida albicans following Its Conversion to a Glycosynthase.
Biochemistry, 53, 2014
7NV1
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BU of 7nv1 by Molmil
Human Pol Kappa holoenzyme with Ub-PCNA
Descriptor: DNA Primer, DNA Template, DNA polymerase kappa, ...
Authors:Lancey, C, De Biasio, A, Hamdan, S.M.
Deposit date:2021-03-15
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Cryo-EM structure of human Pol kappa bound to DNA and mono-ubiquitylated PCNA.
Nat Commun, 12, 2021

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PDB entries from 2024-07-10

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