Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6SAA
DownloadVisualize
BU of 6saa by Molmil
M-TRTX-Preg1a (Poecilotheria regalis)
Descriptor: U1-theraphotoxin-Pf3
Authors:Meudal, H, Landon, C, Delmas, A.F.
Deposit date:2019-07-16
Release date:2020-07-22
Last modified:2020-08-26
Method:SOLUTION NMR
Cite:A Venomics Approach Coupled to High-Throughput Toxin Production Strategies Identifies the First Venom-Derived Melanocortin Receptor Agonists.
J.Med.Chem., 63, 2020
6CHC
DownloadVisualize
BU of 6chc by Molmil
JzTx-V toxin peptide, wild-type
Descriptor: Beta/kappa-theraphotoxin-Cg2a
Authors:Jordan, J.B.
Deposit date:2018-02-22
Release date:2018-05-16
Method:SOLUTION NMR
Cite:Pharmacological characterization of potent and selective NaV1.7 inhibitors engineered from Chilobrachys jingzhao tarantula venom peptide JzTx-V.
PLoS ONE, 13, 2018
6SOE
DownloadVisualize
BU of 6soe by Molmil
Mouse RBM20 RRM domain
Descriptor: RNA-binding protein 20
Authors:Mackereth, C.D, Upadhyay, S.K.
Deposit date:2019-08-29
Release date:2019-11-06
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural basis of UCUU RNA motif recognition by splicing factor RBM20.
Nucleic Acids Res., 48, 2020
6SJW
DownloadVisualize
BU of 6sjw by Molmil
Structure of the self-processing module of iron-regulated FrpC of N. Meningitidis with calcium ions
Descriptor: CALCIUM ION, Iron-regulated protein FrpC
Authors:Kuban, V, Macek, P, Hritz, J, Nechvatalova, K, Nedbalcova, K, Faldyna, M, Zidek, L, Bumba, L.
Deposit date:2019-08-14
Release date:2020-02-26
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structural Basis of Ca 2+ -Dependent Self-Processing Activity of Repeat-in-Toxin Proteins.
Mbio, 11, 2020
5YOF
DownloadVisualize
BU of 5yof by Molmil
Crystal structure of zika virus NS3 protease in complex with a dipeptide inhibitor
Descriptor: (S)-2-acetamido-6-amino-N-((S)-5-guanidino-1-oxopentan-2-yl)hexanamide, NS2B cofactor, NS3 Protease
Authors:Phoo, W.W, Zhang, Z.Z.
Deposit date:2017-10-27
Release date:2018-03-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structural Insights into the Inhibition of Zika Virus NS2B-NS3 Protease by a Small-Molecule Inhibitor
Structure, 26, 2018
6T33
DownloadVisualize
BU of 6t33 by Molmil
The unusual structure of Ruminococcin C1 antimicrobial peptide confers activity against clinical pathogens
Descriptor: Ruminococcin C
Authors:Chiumento, S, Roblin, C, Bornet, O, Nouailler, M, Muller, C, Basset, C, Kieffer-Jaquinod, S, Coute, Y, Torelli, S, Le Pape, L, Shunemann, V, Jeannot, K, Nicoletti, C, Iranzo, O, Maresca, M, Giardina, T, Fons, M, Devillard, E, Perrier, J, Atta, M, Guerlesquin, F, Lafond, M, Duarte, V.
Deposit date:2019-10-10
Release date:2020-08-12
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The unusual structure of Ruminococcin C1 antimicrobial peptide confers clinical properties.
Proc.Natl.Acad.Sci.USA, 117, 2020
6TAZ
DownloadVisualize
BU of 6taz by Molmil
Timeless couples G quadruplex detection with processing by DDX11 during DNA replication
Descriptor: Protein timeless homolog
Authors:Lerner Koch, L, Holzer, S, Kilkenny, M.L, Murat, P, Svikovic, S, Schiavone, D, Bittleston, A, Maman, J.D, Branzei, D, Stott, K, Pellegrini, L, Sale, E.J.
Deposit date:2019-10-31
Release date:2020-07-01
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Timeless couples G-quadruplex detection with processing by DDX11 helicase during DNA replication.
Embo J., 39, 2020
6CIX
DownloadVisualize
BU of 6cix by Molmil
Lactam cyclised mimetic of a fragment of p21
Descriptor: p21
Authors:Wegener, K.L.
Deposit date:2018-02-25
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
2LEV
DownloadVisualize
BU of 2lev by Molmil
Structure of the DNA complex of the C-Terminal domain of Ler
Descriptor: DNA (5'-D(*CP*CP*TP*AP*TP*CP*AP*AP*TP*TP*AP*TP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*AP*TP*AP*AP*TP*TP*GP*AP*TP*AP*GP*G)-3'), Ler
Authors:Cordeiro, T.N, Schimdt, H, Madrid, C, Juarez, A, Bernado, P, Grisienger, C, Garcia, J, Pons, M.
Deposit date:2011-06-23
Release date:2011-12-07
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Indirect DNA Readout by an H-NS Related Protein: Structure of the DNA Complex of the C-Terminal Domain of Ler.
Plos Pathog., 7, 2011
6CTB
DownloadVisualize
BU of 6ctb by Molmil
Apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
Descriptor: Calmodulin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
Authors:Turner, M.L, Anderson, D.E, Ames, J.B.
Deposit date:2018-03-22
Release date:2019-09-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:apo-Calmodulin Bound to Calcium Voltage Gated Channel 1.2 IQ-Motif
To Be Published
6DA1
DownloadVisualize
BU of 6da1 by Molmil
ETS1 in complex with synthetic SRR mimic
Descriptor: Protein C-ets-1, SULFATE ION, serine-rich region (SRR) peptide
Authors:Perez-Borrajero, C, Okon, M, Lin, C.S, Scheu, K, Murphy, M.E.P, Graves, B.J, McIntosh, L.P.
Deposit date:2018-05-01
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.000127 Å)
Cite:The Biophysical Basis for Phosphorylation-Enhanced DNA-Binding Autoinhibition of the ETS1 Transcription Factor.
J. Mol. Biol., 431, 2019
2LP2
DownloadVisualize
BU of 2lp2 by Molmil
Solution structure and dynamics of human S100A1 protein modified at cysteine 85 with homocysteine disulfide bond formation in calcium saturated form
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, CALCIUM ION, Protein S100-A1
Authors:Nowakowski, M.E, Jaremko, L, Jaremko, M, Zdanowski, K, Ejchart, A.
Deposit date:2012-01-31
Release date:2013-02-20
Last modified:2024-04-03
Method:SOLUTION NMR
Cite:Impact of calcium binding and thionylation of S100A1 protein on its nuclear magnetic resonance-derived structure and backbone dynamics.
Biochemistry, 52, 2013
6TC8
DownloadVisualize
BU of 6tc8 by Molmil
2'-F-arabinoguanosine and 2'-F-riboguanosine modified hybrid type G-quadruplex with V-loop
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*(GFL)P*(GF2)P*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Haase, L, Weisz, K.
Deposit date:2019-11-05
Release date:2020-03-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Switching the type of V-loop in sugar-modified G-quadruplexes through altered fluorine interactions.
Chem.Commun.(Camb.), 56, 2020
6TCG
DownloadVisualize
BU of 6tcg by Molmil
2'-F-riboguanosine and 2'-F-arabinoguanosine modified G-quadruplex with V-loop and all-syn G-tract
Descriptor: DNA (5'-D(*GP*GP*GP*AP*TP*GP*GP*GP*AP*CP*AP*CP*AP*(GF2)P*(GFL)P*GP*GP*AP*CP*GP*GP*G)-3')
Authors:Haase, L, Weisz, K.
Deposit date:2019-11-06
Release date:2020-03-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Switching the type of V-loop in sugar-modified G-quadruplexes through altered fluorine interactions.
Chem.Commun.(Camb.), 56, 2020
6DAT
DownloadVisualize
BU of 6dat by Molmil
ETS1 in complex with synthetic SRR mimic
Descriptor: Protein C-ets-1, SULFATE ION, serine-rich region (SRR) peptide
Authors:Perez-Borrajero, C, Okon, M, Lin, C.S, Scheu, K, Murphy, M.E.P, Graves, B.J, McIntosh, L.P.
Deposit date:2018-05-02
Release date:2019-01-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35002637 Å)
Cite:The Biophysical Basis for Phosphorylation-Enhanced DNA-Binding Autoinhibition of the ETS1 Transcription Factor.
J. Mol. Biol., 431, 2019
6DMZ
DownloadVisualize
BU of 6dmz by Molmil
Solution structure of ZmD32
Descriptor: Flower-specific gamma-thionin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2018-06-05
Release date:2019-05-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Salt-Tolerant Antifungal and Antibacterial Activities of the Corn Defensin ZmD32.
Front Microbiol, 10, 2019
5YMY
DownloadVisualize
BU of 5ymy by Molmil
The structure of the complex between Rpn13 and K48-diUb
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Liu, Z, Dong, X, Gong, Z, Yi, H.W, Liu, K, Yang, J, Zhang, W.P, Tang, C.
Deposit date:2017-10-22
Release date:2019-03-13
Last modified:2019-04-24
Method:SOLUTION NMR
Cite:Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.
Cell Discov, 5, 2019
5YKL
DownloadVisualize
BU of 5ykl by Molmil
Antimicrobial peptide AY1C designed from the skin secretion of Chinese Odorous frogs
Descriptor: designed AY1C
Authors:Pal, I, Atreya, H.S, Bhunia, A.
Deposit date:2017-10-15
Release date:2017-10-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
5YKQ
DownloadVisualize
BU of 5ykq by Molmil
Designed peptide CAY1 from Odorrana andersonii skin secretion
Descriptor: designed CAY1
Authors:Pal, I, Atreya, H.S, Bhunia, A.
Deposit date:2017-10-15
Release date:2017-11-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
6TXT
DownloadVisualize
BU of 6txt by Molmil
Major subunit ComGC from S. sanguinis Com pseudopili
Descriptor: Competence pilin-like protein ComGC
Authors:Sheppard, D, Berry, J.L, Matthews, S.J, Pelicic, V.
Deposit date:2020-01-14
Release date:2020-04-15
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:The major subunit of widespread competence pili exhibits a novel and conserved type IV pilin fold.
J.Biol.Chem., 295, 2020
5YKK
DownloadVisualize
BU of 5ykk by Molmil
Antimicrobial peptide Andersonin-Y1 (AY1)
Descriptor: Andersonin-Y1 (AY1)
Authors:Pal, I, Atreya, H.S, Bhunia, A.
Deposit date:2017-10-15
Release date:2017-11-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A Peptide-Nanoparticle System with Improved Efficacy against Multidrug Resistant Bacteria.
Sci Rep, 9, 2019
5ZEW
DownloadVisualize
BU of 5zew by Molmil
A ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum
Descriptor: Ubiquitin-like protein
Authors:Mi, J, Ye, K.Q.
Deposit date:2018-02-28
Release date:2019-02-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The hydrophobic effect and electrostatic interactions contribute to the thermostability of the ubiquitin-like protein from the hyperthermophilic archaea Caldiarchaeum subterraneum
To Be Published
5Z5W
DownloadVisualize
BU of 5z5w by Molmil
VFR12 in complex with LPS micelles
Descriptor: Peptide from Prothrombin
Authors:Saravanan, R, Schmidtchen, A.
Deposit date:2018-01-21
Release date:2018-03-07
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for endotoxin neutralisation and anti-inflammatory activity of thrombin-derived C-terminal peptides.
Nat Commun, 9, 2018
5Z5R
DownloadVisualize
BU of 5z5r by Molmil
Nukacin ISK-1 in inactive state
Descriptor: Lantibiotic nukacin
Authors:Kohda, D, Fujinami, D.
Deposit date:2018-01-19
Release date:2018-11-28
Last modified:2024-07-10
Method:SOLUTION NMR
Cite:The lantibiotic nukacin ISK-1 exists in an equilibrium between active and inactive lipid-II binding states.
Commun Biol, 1, 2018
5ZPV
DownloadVisualize
BU of 5zpv by Molmil
Solution Structure of Thioredoxin-Like Effector Protein (TRX3) from Edwardsiella piscicida
Descriptor: Thioredoxin (H-type,TRX-H)
Authors:Sayed, A.M, Mok, Y.K.
Deposit date:2018-04-16
Release date:2019-05-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Trxlp, a thioredoxin-like effector from Edwardsiella piscicida inhibits cellular redox signaling and nuclear translocation of NF-kappa B.
Int.J.Biol.Macromol., 148, 2020

225158

PDB entries from 2024-09-18

PDB statisticsPDBj update infoContact PDBjnumon