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8V25
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BU of 8v25 by Molmil
H2BK120ub-modified nucleosome ubiquitin position 1
Descriptor: 601 DNA (147-MER), Histone H2A, Histone H2B 1.1, ...
Authors:Hicks, C.W, Wolberger, C.
Deposit date:2023-11-21
Release date:2024-08-28
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Ubiquitinated histone H2B as gatekeeper of the nucleosome acidic patch.
Nucleic Acids Res., 52, 2024
8YBF
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BU of 8ybf by Molmil
Crystal structure of canine distemper virus hemagglutinin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin glycoprotein
Authors:Fukuhara, H, Yumoto, K, Sako, M, Kajikawa, M, Ose, T, Hashiguchi, T, Kamishikiryo, J, Maita, N, Kuroki, K, Maenaka, K.
Deposit date:2024-02-13
Release date:2024-07-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Glycan-shielded homodimer structure and dynamical features of the canine distemper virus hemagglutinin relevant for viral entry and efficient vaccination.
Elife, 12, 2024
9BF6
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BU of 9bf6 by Molmil
Cryo-EM structure of the HIV-1 WITO IDL Env trimer in complex with PGT122 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, Envelope glycoprotein gp41, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2024-04-16
Release date:2024-07-31
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Design of soluble HIV-1 envelope trimers free of covalent gp120-gp41 bonds with prevalent native-like conformation.
Cell Rep, 43, 2024
9BXO
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BU of 9bxo by Molmil
Straight Filament of tau amyloids found in Down Syndrome individuals
Descriptor: Microtubule-associated protein tau
Authors:Tse, E, Ghosh, U, Condello, C, Southworth, D.
Deposit date:2024-05-22
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Cryo-EM structures reveal tau filaments from Down syndrome adopt Alzheimer's disease fold.
Acta Neuropathol Commun, 12, 2024
8TEX
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BU of 8tex by Molmil
Avian Adeno-associated virus - empty capsid
Descriptor: Capsid protein
Authors:Hsi, J, Mietzsch, M, Chipman, P, Afione, S, Zeher, A, Huang, R, Chiorini, J, McKenna, R.
Deposit date:2023-07-07
Release date:2023-08-30
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (2.54 Å)
Cite:Structural and antigenic characterization of the avian adeno-associated virus capsid.
J.Virol., 97, 2023
8TEY
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BU of 8tey by Molmil
Avian Adeno-associated virus - empty capsid
Descriptor: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein
Authors:Hsi, J, Mietzsch, M, Chipman, P, Afione, S, Zeher, A, Huang, R, Chiorini, J, McKenna, R.
Deposit date:2023-07-07
Release date:2023-08-30
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Structural and antigenic characterization of the avian adeno-associated virus capsid.
J.Virol., 97, 2023
8XUS
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BU of 8xus by Molmil
JN.1 Spike Trimer in complex with heparan sulfate
Descriptor: 2-O-sulfo-beta-L-altropyranuronic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Yue, C, Liu, P.
Deposit date:2024-01-14
Release date:2024-07-03
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Spike N354 glycosylation augments SARS-CoV-2 fitness for human adaptation through structural plasticity.
Natl Sci Rev, 11, 2024
8VGT
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BU of 8vgt by Molmil
Structure of the HKU1 RBD bound to the human TMPRSS2 receptor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, ...
Authors:Park, Y.J, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2023-12-27
Release date:2024-03-06
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Human coronavirus HKU1 recognition of the TMPRSS2 host receptor.
Cell, 187, 2024
9AUC
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BU of 9auc by Molmil
Human Amylin1 Receptor in Complex with Gs and human Calcitonin Gene-Related Peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL HEMISUCCINATE, Calcitonin gene-related peptide 1, ...
Authors:Cao, J, Belousoff, M.J, Wootten, D.L, Sexton, P.M.
Deposit date:2024-02-28
Release date:2024-04-24
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Cryo-EM Structure of the Human Amylin 1 Receptor in Complex with CGRP and Gs Protein.
Biochemistry, 63, 2024
9BXI
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BU of 9bxi by Molmil
Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Descriptor: Microtubule-associated protein tau
Authors:Tse, E, Ghosh, U, Condello, C, Southworth, D.
Deposit date:2024-05-22
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures reveal tau filaments from Down syndrome adopt Alzheimer's disease fold.
Acta Neuropathol Commun, 12, 2024
8V99
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BU of 8v99 by Molmil
GII.26 Leon 4509 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Capsid protein VP1, ...
Authors:Kher, G, Reese, T, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V98
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BU of 8v98 by Molmil
GII.24 Loreto 1972 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Capsid protein VP1
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V9A
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BU of 8v9a by Molmil
GII.NA1 Loreto 1257 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1
Authors:Kher, G, Kim, I, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V97
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BU of 8v97 by Molmil
GII.17 CS-E1 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1, DI(HYDROXYETHYL)ETHER
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V95
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BU of 8v95 by Molmil
GII.8 Amsterdam norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein (Fragment)
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
8V96
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BU of 8v96 by Molmil
GII.14 M7 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein VP1
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
7F2B
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BU of 7f2b by Molmil
Crystal structure of SARS-CoV-2 nucleocapsid protein C-terminal RNA binding domain at 2.0A resolution
Descriptor: CHLORIDE ION, Nucleoprotein, PHOSPHATE ION
Authors:Liu, C, Chen, Y.W.
Deposit date:2021-06-10
Release date:2021-09-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies.
Febs J., 289, 2022
7F2E
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BU of 7f2e by Molmil
SARS-CoV-2 nucleocapsid protein C-terminal domain (dodecamer)
Descriptor: Nucleoprotein, PHOSPHATE ION
Authors:Liu, C, Jiang, H.
Deposit date:2021-06-10
Release date:2021-10-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of the SARS-CoV-2 nucleocapsid protein C-terminal domain and development of nucleocapsid-targeting nanobodies.
Febs J., 289, 2022
7FH0
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BU of 7fh0 by Molmil
Crystallographic structure of two neutralizing nanobodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Zheng, P, Jin, J.
Deposit date:2021-07-28
Release date:2022-08-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Hetero-bivalent nanobodies provide broad-spectrum protection against SARS-CoV-2 variants of concern including Omicron.
Cell Res., 32, 2022
7FD2
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BU of 7fd2 by Molmil
Cryo-EM structure of an alphavirus, Getah virus
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Liu, Z, Liu, C, Wang, A.
Deposit date:2021-07-15
Release date:2022-08-10
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.81 Å)
Cite:Structure of infective Getah virus at 2.8 angstrom resolution determined by cryo-electron microscopy.
Cell Discov, 8, 2022
7FAB
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BU of 7fab by Molmil
CRYSTAL STRUCTURE OF HUMAN IMMUNOGLOBULIN FRAGMENT FAB NEW REFINED AT 2.0 ANGSTROMS RESOLUTION
Descriptor: IGG1-LAMBDA NEW FAB (HEAVY CHAIN), IGG1-LAMBDA NEW FAB (LIGHT CHAIN)
Authors:Saul, F, Poljak, R.J.
Deposit date:1991-11-20
Release date:1994-01-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of human immunoglobulin fragment Fab New refined at 2.0 A resolution.
Proteins, 14, 1992
7LT3
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BU of 7lt3 by Molmil
NHEJ Long-range synaptic complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (30-MER), DNA (31-MER), ...
Authors:He, Y, Chen, S.
Deposit date:2021-02-18
Release date:2021-04-14
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis of long-range to short-range synaptic transition in NHEJ.
Nature, 593, 2021
7LX5
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BU of 7lx5 by Molmil
The SARS-CoV-2 spike protein receptor binding domain bound to neutralizing nanobodies WNb 2 and WNb 10
Descriptor: Spike glycoprotein, WNb 10, WNb 2
Authors:Pymm, P, Glukhova, A, Tham, W.-H.
Deposit date:2021-03-03
Release date:2021-05-05
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:Nanobody cocktails potently neutralize SARS-CoV-2 D614G N501Y variant and protect mice.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LSY
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BU of 7lsy by Molmil
NHEJ Short-range synaptic complex
Descriptor: DNA (26-MER), DNA (5'-D(P*CP*AP*AP*TP*GP*AP*AP*AP*CP*GP*GP*AP*AP*CP*AP*GP*TP*CP*AP*G)-3'), DNA (5'-D(P*GP*TP*TP*CP*TP*TP*AP*GP*TP*AP*TP*AP*TP*A)-3'), ...
Authors:He, Y, Chen, S.
Deposit date:2021-02-18
Release date:2021-04-14
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (8.4 Å)
Cite:Structural basis of long-range to short-range synaptic transition in NHEJ.
Nature, 593, 2021
7MFC
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BU of 7mfc by Molmil
Crystal structure of CSF1R in complex with vimseltinib
Descriptor: Macrophage colony-stimulating factor 1 receptor, Vimseltinib
Authors:Abendroth, J, Davies, D.R, Atkins, K.
Deposit date:2021-04-08
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Vimseltinib: A Precision CSF1R Therapy for Tenosynovial Giant Cell Tumors and Diseases Promoted by Macrophages.
Mol.Cancer Ther., 20, 2021

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PDB entries from 2024-11-13

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