Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2O9E
DownloadVisualize
BU of 2o9e by Molmil
Crystal Structure of AqpZ mutant T183C complexed with mercury
Descriptor: Aquaporin Z, MERCURY (II) ION
Authors:Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2006-12-13
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
4DP3
DownloadVisualize
BU of 4dp3 by Molmil
Quadruple mutant (N51I+C59R+S108N+I164L) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with P218 and NADPH
Descriptor: 3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid, Bifunctional dihydrofolate reductase-thymidylate synthase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Yuthavong, Y, Vilaivan, T, Kamchonwongpaisan, S, Charman, S.A, McLennan, D.N, White, K.L, Vivas, L, Bongard, E, Chitnumsub, P, Tarnchompoo, B, Thongphanchang, C, Taweechai, S, Vanichtanakul, J, Arwon, U, Fantauzzi, P, Yuvaniyama, J, Charman, W.N, Matthews, D.
Deposit date:2012-02-13
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Malarial dihydrofolate reductase as a paradigm for drug development against a resistance-compromised target
Proc.Natl.Acad.Sci.USA, 109, 2012
4I70
DownloadVisualize
BU of 4i70 by Molmil
Crystal structure of the Trypanosoma brucei Inosine-Adenosine-Guanosine nucleoside hydrolase
Descriptor: CALCIUM ION, Inosine-adenosine-guanosine-nucleoside hydrolase
Authors:Giannese, F, Degano, M.
Deposit date:2012-11-30
Release date:2013-08-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of purine nucleosidase from Trypanosoma brucei bound to isozyme-specific trypanocidals and a novel metalorganic inhibitor
Acta Crystallogr.,Sect.D, 69, 2013
4I7A
DownloadVisualize
BU of 4i7a by Molmil
GrpN pentameric microcompartment shell protein from Rhodospirillum rubrum
Descriptor: CHLORIDE ION, Ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Authors:Wheatley, N.M, Gidaniyan, S.D, Cascio, D, Yeates, T.O.
Deposit date:2012-11-30
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Bacterial microcompartment shells of diverse functional types possess pentameric vertex proteins.
Protein Sci., 22, 2013
3QL1
DownloadVisualize
BU of 3ql1 by Molmil
Crystal Structure of Ribonuclease A Variant A4C/D83E/V118C
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Ribonuclease pancreatic, ...
Authors:Arnold, U, Schoepfel, M.
Deposit date:2011-02-02
Release date:2012-02-29
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Significant stabilization of ribonuclease A by additive effects
Febs J., 279, 2012
4DQC
DownloadVisualize
BU of 4dqc by Molmil
Crystal Structure of (G16C/L38C) HIV-1 Protease in Complex with DRV
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, Aspartyl protease, GLYCEROL, ...
Authors:Schiffer, C.A, Mittal, S.
Deposit date:2012-02-15
Release date:2012-03-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Hydrophobic core flexibility modulates enzyme activity in HIV-1 protease.
J.Am.Chem.Soc., 134, 2012
2O9F
DownloadVisualize
BU of 2o9f by Molmil
Crystal Structure of AqpZ mutant L170C
Descriptor: Aquaporin Z
Authors:Savage, D.F, Stroud, R.M, Center for Structures of Membrane Proteins (CSMP)
Deposit date:2006-12-13
Release date:2007-02-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis of aquaporin inhibition by mercury.
J.Mol.Biol., 368, 2007
3QTL
DownloadVisualize
BU of 3qtl by Molmil
Structural Basis for Dual-inhibition Mechanism of a Non-classical Kazal-type Serine Protease Inhibitor from Horseshoe Crab in Complex with Subtilisin
Descriptor: Kazal-type serine protease inhibitor SPI-1, Subtilisin-like serin protease
Authors:Shenoy, R.T, Sivaraman, J.
Deposit date:2011-02-23
Release date:2011-06-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for dual-inhibition mechanism of a non-classical kazal-type serine protease inhibitor from horseshoe crab in complex with subtilisin.
Plos One, 6, 2011
4DQI
DownloadVisualize
BU of 4dqi by Molmil
Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and dCTP (paired with dG of template)
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*C*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*(DOC))-3'), ...
Authors:Wang, W, Beese, L.S.
Deposit date:2012-02-15
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides.
J.Biol.Chem., 287, 2012
4DPG
DownloadVisualize
BU of 4dpg by Molmil
Crystal Structure of Human LysRS: P38/AIMP2 Complex I
Descriptor: ALANINE, Aminoacyl tRNA synthase complex-interacting multifunctional protein 2, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
Authors:Fang, P, Wang, J, Bennett, S.P, Guo, M.
Deposit date:2012-02-13
Release date:2013-02-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.844 Å)
Cite:Structural Switch of Lysyl-tRNA Synthetase between Translation and Transcription.
Mol.Cell, 49, 2013
2O9P
DownloadVisualize
BU of 2o9p by Molmil
beta-glucosidase B from Paenibacillus polymyxa
Descriptor: Beta-glucosidase B
Authors:Isorna, P, Polaina, J, Sanz-Aparicio, J.
Deposit date:2006-12-14
Release date:2007-10-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Paenibacillus polymyxa beta-Glucosidase B Complexes Reveal the Molecular Basis of Substrate Specificity and Give New Insights into the Catalytic Machinery of Family I Glycosidases
J.Mol.Biol., 371, 2007
3QLJ
DownloadVisualize
BU of 3qlj by Molmil
Crystal structure of a short chain dehydrogenase from Mycobacterium avium
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SODIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2011-02-02
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Increasing the structural coverage of tuberculosis drug targets.
Tuberculosis (Edinb), 95, 2015
2OCA
DownloadVisualize
BU of 2oca by Molmil
The crystal structure of T4 UvsW
Descriptor: ATP-dependent DNA helicase uvsW
Authors:Kerr, I.D, White, S.W.
Deposit date:2006-12-20
Release date:2007-10-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystallographic and NMR Analyses of UvsW and UvsW.1 from Bacteriophage T4.
J.Biol.Chem., 282, 2007
2OA5
DownloadVisualize
BU of 2oa5 by Molmil
Crystal structure of ORF52 from Murid herpesvirus (MUHV-4) (Murine gammaherpesvirus 68) at 2.1 A resolution. Northeast Structural Genomics Consortium target MHR28B.
Descriptor: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, Hypothetical protein BQLF2
Authors:Benach, J, Chen, Y, Seetharaman, J, Janjua, H, Xiao, R, Cunningham, K, Ma, L.-C, Ho, C.K, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-12-14
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and functional studies of the abundant tegument protein ORF52 from murine gammaherpesvirus 68.
J.Biol.Chem., 282, 2007
3QUE
DownloadVisualize
BU of 3que by Molmil
Human p38 MAP Kinase in Complex with Skepinone-L
Descriptor: 2-[(2,4-difluorophenyl)amino]-7-{[(2R)-2,3-dihydroxypropyl]oxy}-10,11-dihydro-5H-dibenzo[a,d][7]annulen-5-one, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Mayer-Wrangowski, S, Richters, A, Rauh, D.
Deposit date:2011-02-23
Release date:2012-01-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Skepinone-L is a selective p38 mitogen-activated protein kinase inhibitor.
Nat.Chem.Biol., 8, 2012
2GU2
DownloadVisualize
BU of 2gu2 by Molmil
Crystal Structure of an Aspartoacylase from Rattus norvegicus
Descriptor: Aspa protein, SULFATE ION, ZINC ION
Authors:Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-04-28
Release date:2006-06-20
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.805 Å)
Cite:Structure of aspartoacylase, the brain enzyme impaired in Canavan disease.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4DRN
DownloadVisualize
BU of 4drn by Molmil
EVALUATION OF SYNTHETIC FK506 ANALOGS AS LIGANDS FOR FKBP51 AND FKBP52: COMPLEX OF FKBP51 WITH {3-[(1R)-3-(3,4-dimethoxyphenyl)-1-({[(2S)-1-{[(1S,2R)-2-ethyl-1-hydroxycyclohexyl](oxo)acetyl}piperidin-2-yl]carbonyl}oxy)propyl]phenoxy}acetic acid
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP5, {3-[(1R)-3-(3,4-dimethoxyphenyl)-1-({[(2S)-1-{[(1S,2R)-2-ethyl-1-hydroxycyclohexyl](oxo)acetyl}piperidin-2-yl]carbonyl}oxy)propyl]phenoxy}acetic acid
Authors:Gopalakrishnan, R, Kozany, C, Gaali, S, Kress, C, Hoogeland, B, Bracher, A, Hausch, F.
Deposit date:2012-02-17
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.069 Å)
Cite:Evaluation of Synthetic FK506 Analogues as Ligands for the FK506-Binding Proteins 51 and 52.
J.Med.Chem., 55, 2012
4I9Z
DownloadVisualize
BU of 4i9z by Molmil
Crystal structure of the PDE5A1 catalytic domain in complex with novel inhibitors
Descriptor: 5-bromo-2-{5-[(4-methylpiperazin-1-yl)acetyl]-2-propoxyphenyl}-6-(propan-2-yl)pyrimidin-4(3H)-one, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
Authors:Ren, J, Chen, T, Xu, Y.
Deposit date:2012-12-05
Release date:2014-01-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Exploration of the 5-bromopyrimidin-4(3H)-ones as potent inhibitors of PDE5.
Bioorg.Med.Chem.Lett., 23, 2013
3ERQ
DownloadVisualize
BU of 3erq by Molmil
Crystal structure of Staphylococcal nuclease variant L25K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-10-02
Release date:2008-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural consequences of the ionization of lysine residues at 25 internal positions in a protein.
To be Published
4DS5
DownloadVisualize
BU of 4ds5 by Molmil
Ternary complex of Bacillus DNA Polymerase I Large Fragment, DNA duplex, and rCTP in presence of Mg2+
Descriptor: DNA (5'-D(*CP*AP*TP*GP*GP*GP*AP*GP*TP*CP*AP*GP*G)-3'), DNA (5'-D(*CP*CP*TP*GP*AP*CP*TP*CP*C)-3'), DNA polymerase, ...
Authors:Wang, W, Beese, L.S.
Deposit date:2012-02-17
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structural factors that determine selectivity of a high fidelity DNA polymerase for deoxy-, dideoxy-, and ribonucleotides.
J.Biol.Chem., 287, 2012
4DUF
DownloadVisualize
BU of 4duf by Molmil
cytochrome P450 BM3h-2G9 MRI sensor bound to serotonin
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, SEROTONIN, cytochrome P450 BM3 variant 2G9
Authors:Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H.
Deposit date:2012-02-21
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin.
J.Mol.Biol., 422, 2012
2OG1
DownloadVisualize
BU of 2og1 by Molmil
Crystal Structure of BphD, a C-C hydrolase from Burkholderia xenovorans LB400
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, ETHANOL, GLYCEROL, ...
Authors:Dai, S, Ke, J, Bolin, J.T.
Deposit date:2007-01-04
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Kinetic and structural insight into the mechanism of BphD, a C-C bond hydrolase from the biphenyl degradation pathway
Biochemistry, 45, 2006
2OGB
DownloadVisualize
BU of 2ogb by Molmil
Crystal structure of the C-terminal domain of mouse Nrdp1
Descriptor: GLYCEROL, RING finger protein 41, THIOCYANATE ION
Authors:Bouyain, S, Leahy, D.J.
Deposit date:2007-01-05
Release date:2007-01-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based mutagenesis of the substrate-recognition domain of Nrdp1/FLRF identifies the binding site for the receptor tyrosine kinase ErbB3.
Protein Sci., 16, 2007
4DUB
DownloadVisualize
BU of 4dub by Molmil
cytochrome P450 BM3h-9D7 MRI sensor bound to dopamine
Descriptor: L-DOPAMINE, PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 BM3 variant 9D7
Authors:Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H.
Deposit date:2012-02-21
Release date:2012-06-13
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin.
J.Mol.Biol., 422, 2012
4DUZ
DownloadVisualize
BU of 4duz by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit with a 16S rRNA mutation, U13C, bound with streptomycin
Descriptor: 16S rRNA, MAGNESIUM ION, STREPTOMYCIN, ...
Authors:Demirci, H, Murphy IV, F, Murphy, E, Gregory, S.T, Dahlberg, A.E, Jogl, G.
Deposit date:2012-02-22
Release date:2013-02-27
Method:X-RAY DIFFRACTION (3.651 Å)
Cite:A structural basis for streptomycin resistance
To be Published

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon