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2YWJ
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BU of 2ywj by Molmil
Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
Descriptor: Glutamine amidotransferase subunit pdxT
Authors:Manzoku, M, Ebihara, A, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-20
Release date:2007-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of uncharacterized conserved protein from Methanocaldococcus jannaschii
to be published
8SK1
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BU of 8sk1 by Molmil
Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase, 5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine
Authors:Shaw, G.X, Tropea, J.E, Shi, G, Waugh, D.S, Ji, X.
Deposit date:2023-04-18
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Bacillus anthracis HPPK in complex with bisubstrate inhibitor HP-73
To be published
3HGN
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BU of 3hgn by Molmil
Structure of porcine pancreatic elastase complexed with a potent peptidyl inhibitor FR130180 determined by neutron crystallography
Descriptor: 4-[[(2S)-3-methyl-1-oxo-1-[(2S)-2-[[(3S)-1,1,1-trifluoro-4-methyl-2-oxo-pentan-3-yl]carbamoyl]pyrrolidin-1-yl]butan-2-yl]carbamoyl]benzoic acid, CALCIUM ION, Elastase-1, ...
Authors:Tamada, T, Kinoshita, T, Kuroki, R, Tada, T.
Deposit date:2009-05-14
Release date:2009-07-28
Last modified:2023-11-01
Method:NEUTRON DIFFRACTION (1.65 Å), X-RAY DIFFRACTION
Cite:Combined High-Resolution Neutron and X-ray Analysis of Inhibited Elastase Confirms the Active-Site Oxyanion Hole but Rules against a Low-Barrier Hydrogen Bond
J.Am.Chem.Soc., 131, 2009
8S3R
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BU of 8s3r by Molmil
HUMAN PI3KDELTA IN COMPLEX WITH PYRIDAZINONE INHIBITOR 7
Descriptor: 5-[(1~{S})-1-[4-azanyl-3-(5-oxidanylpyridin-3-yl)pyrazolo[3,4-d]pyrimidin-1-yl]ethyl]-4-cyclopentyl-2-(phenylmethyl)pyridazin-3-one, Phosphatidylinositol 3-kinase regulatory subunit alpha, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
Authors:Pala, D, Bruno, P, Capelli, A.M, Biagetti, M.
Deposit date:2024-02-20
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Discovery and Optimization of Pyridazinones as PI3K delta Selective Inhibitors for Administration by Inhalation.
J.Med.Chem., 2024
5KJ6
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BU of 5kj6 by Molmil
V197I Horse liver alcohol dehydrogenase complexed with NAD+ and pentafluorobenzyl alcohol
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V.
Deposit date:2016-06-17
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Contribution of buried distal amino acid residues in horse liver alcohol dehydrogenase to structure and catalysis.
Protein Sci., 27, 2018
8SIF
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BU of 8sif by Molmil
Crystal structure of Escherichia coli HPPK in complex with bisubstrate inhibitor HP-101
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-{(2R,4R)-1-[3-(2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidin-5-yl)propyl]-2-carboxypiperidin-4-yl}-5'-thioadenosine
Authors:Shaw, G.X, Shi, G, Ji, X.
Deposit date:2023-04-16
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The first bisubstrate inhibitor of HPPK exhibiting cell permeability
To be published
8RWW
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BU of 8rww by Molmil
Crystal structure of native alpha-keto C-methyl transferase SgvM bound to ketoleucine
Descriptor: 2-OXO-4-METHYLPENTANOIC ACID, CHLORIDE ION, Methyltransferase, ...
Authors:Gerhardt, S, Andexer, J.N.
Deposit date:2024-02-05
Release date:2024-07-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structures and protein engineering of the alpha-keto acid C-methyltransferases SgvM and MrsA for rational substrate transfer.
Chembiochem, 2024
2YYN
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BU of 2yyn by Molmil
Crystal structure of human bromodomain protein
Descriptor: Transcription intermediary factor 1-alpha
Authors:Kishishita, S, Uchikubo-Kamo, T, Murayama, K, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-30
Release date:2008-05-06
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human bromodomain protein
To be Published
2YGS
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BU of 2ygs by Molmil
CARD DOMAIN FROM APAF-1
Descriptor: APOPTOTIC PROTEASE ACTIVATING FACTOR 1
Authors:Shi, Y.
Deposit date:1999-05-08
Release date:2000-04-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural basis of procaspase-9 recruitment by the apoptotic protease-activating factor 1.
Nature, 399, 1999
2G8Y
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BU of 2g8y by Molmil
The structure of a putative malate/lactate dehydrogenase from E. coli.
Descriptor: 1,2-ETHANEDIOL, Malate/L-lactate dehydrogenases, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Cuff, M.E, Skarina, T, Edwards, A, Savchenko, A, Cymborowski, M, Minor, W, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-03-03
Release date:2006-04-25
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The structure of a putative malate/lactate dehydrogenase from E. coli.
To be Published
8SP4
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BU of 8sp4 by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
Descriptor: CHLORIDE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RNA polymerase-associated protein RapA
Authors:Shaw, G.X, Kakar, S, Ji, X.
Deposit date:2023-05-02
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:Crystal structure of N-terminally truncated Escherichia coli RapA in complex with ATP-gamma-S
To be published
5DUL
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BU of 5dul by Molmil
1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH
Descriptor: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Osipiuk, J, Mulligan, R, Stam, J, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-09-18
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:1-deoxy-D-xylulose 5-phosphate reductoisomerase from Yersinia pestis in complex with NADPH .
to be published
2G9N
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BU of 2g9n by Molmil
Structure of the DEAD domain of Human eukaryotic initiation factor 4A, eIF4A
Descriptor: Eukaryotic initiation factor 4A-I
Authors:Hogbom, M, Ogg, D, Arrowsmith, C, Berglund, H, Collins, R, Edwards, A, Ehn, M, Flodin, S, Flores, A, Graslund, S, Hallberg, B.M, Hammarstrom, M, Kotenyova, T, Nilsson-Ehle, P, Nordlund, P, Nyman, T, Persson, C, Sagemark, J, Stenmark, P, Sundstrom, M, Thorsell, A.G, Uppenberg, J, Van Den Berg, S, Weigelt, J, Holmberg-Schiavone, L, Structural Genomics Consortium (SGC)
Deposit date:2006-03-07
Release date:2006-03-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Comparative Structural Analysis of Human DEAD-Box RNA Helicases.
Plos One, 5, 2010
8RHS
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BU of 8rhs by Molmil
Structure of the ZnF domain from human Roquin-1
Descriptor: Roquin-1
Authors:Schlundt, A, Tants, J.N.
Deposit date:2023-12-16
Release date:2024-07-03
Method:SOLUTION NMR
Cite:Structure and RNA binding of the Roquin CCCH-type zinc finger
To Be Published
2YZN
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BU of 2yzn by Molmil
Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8.
Descriptor: D-alanine-D-alanine ligase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Kitamuta, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-06
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of D-alanine:D-Alanine Ligase with AMPPNP from Thermus thermophilus HB8
To be Published
8RQG
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BU of 8rqg by Molmil
Histidine-containing phosphotransfer protein from Chaetomium termophilum mutant H105E
Descriptor: 1,2-ETHANEDIOL, Histidine-containing phosphotransfer protein
Authors:Paredes-Martinez, F, Casino, P.
Deposit date:2024-01-18
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and functional insights underlying recognition of histidine phosphotransfer protein in fungal phosphorelay systems.
Commun Biol, 2024
5DVR
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BU of 5dvr by Molmil
Crystal Structure of TgCDPK1 From Toxoplasma Gondii complexed with GW780159X
Descriptor: 4-(3-chlorophenyl)-5-(1,5-naphthyridin-2-yl)-1,3-thiazol-2-amine, Calmodulin-domain protein kinase 1, UNKNOWN ATOM OR ION
Authors:Jiang, D.Q, Tempel, W, Loppnau, P, Graslund, S, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Hui, R, Lovato, D.V, Osman, K.T, Structural Genomics Consortium (SGC)
Deposit date:2015-09-21
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of TgCDPK1 From Toxoplasma Gondii complexed with GW780159X
to be published
2YPT
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BU of 2ypt by Molmil
Crystal structure of the human nuclear membrane zinc metalloprotease ZMPSTE24 mutant (E336A) in complex with a synthetic CSIM tetrapeptide from the C-terminus of prelamin A
Descriptor: CAAX PRENYL PROTEASE 1 HOMOLOG, PRELAMIN-A/C, ZINC ION
Authors:Pike, A.C.W, Dong, Y.Y, Quigley, A, Dong, L, Savitsky, P, Cooper, C.D.O, Chaikuad, A, Goubin, S, Shrestha, L, Li, Q, Mukhopadhyay, S, Yang, J, Xia, X, Shintre, C.A, Barr, A.J, Berridge, G, Chalk, R, Bray, J.E, von Delft, F, Bullock, A, Bountra, C, Arrowsmith, C.H, Edwards, A, Burgess-Brown, N, Carpenter, E.P.
Deposit date:2012-11-01
Release date:2012-12-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The Structural Basis of Zmpste24-Dependent Laminopathies.
Science, 339, 2013
3URK
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BU of 3urk by Molmil
IspH in complex with propynyl diphosphate (1061)
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER, prop-2-yn-1-yl trihydrogen diphosphate
Authors:Span, I, Wang, K, Wang, W, Zhang, Y, Bacher, A, Eisenreich, W, Schulz, C, Oldfield, E, Groll, M.
Deposit date:2011-11-22
Release date:2012-09-05
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of acetylene hydratase activity of the iron-sulphur protein IspH.
Nat Commun, 3, 2012
8SPG
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BU of 8spg by Molmil
Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Shaw, G.X, Ji, X.
Deposit date:2023-05-03
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of N-terminally truncated Escherichia coli RapA in complex with MgADP
To be published
5DW1
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BU of 5dw1 by Molmil
X-ray crystal structure of human BRD2(BD2) in complex with RVX297 to 1.55 A resolution
Descriptor: 2-{3,5-dimethyl-4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}-5,7-dimethoxyquinazolin-4(3H)-one, Bromodomain-containing protein 2, SODIUM ION
Authors:White, A, Fontano, E, Suto, R.K.
Deposit date:2015-09-22
Release date:2016-06-22
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:RVX-297- a novel BD2 selective inhibitor of BET bromodomains.
Biochem.Biophys.Res.Commun., 477, 2016
2FXF
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BU of 2fxf by Molmil
Human spermidine/spermine N1-acetyltransferase
Descriptor: ACETATE ION, ACETYL COENZYME *A, CALCIUM ION, ...
Authors:Min, J.R, Wu, H, Zeng, H, Loppnau, P, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Plotnikov, A.N, Structural Genomics Consortium (SGC)
Deposit date:2006-02-05
Release date:2006-02-14
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of Human spermidine/spermine N1-acetyltransferase
To be Published
2YH5
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BU of 2yh5 by Molmil
Structure of the C-terminal domain of BamC
Descriptor: DAPX PROTEIN, PHOSPHATE ION
Authors:Zeth, K, Albrecht, R.
Deposit date:2011-04-27
Release date:2011-05-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Basis of Outer Membrane Protein Biogenesis in Bacteria.
J.Biol.Chem., 286, 2011
8SD5
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BU of 8sd5 by Molmil
Crystal structure of HPPK from Methanocaldococcus jannaschii
Descriptor: 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, SULFATE ION
Authors:Shaw, G.X, Needle, D, Stair, N.R, Cherry, S, Tropea, J.E, Waugh, D.S, Ji, X.
Deposit date:2023-04-06
Release date:2024-07-03
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Crystal structure of HPPK from Methanocaldococcus jannaschii
To be published
8SLW
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BU of 8slw by Molmil
Cryo-EM structure of the rat TRPM5 channel in 2mM calcium, high-4
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 5
Authors:Karuppan, S, Schrag, L.G, Jara-Oseguera, A, Zubcevic, L.
Deposit date:2023-04-24
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Structural dynamics at cytosolic interprotomer interfaces control gating of a mammalian TRPM5 channel.
Proc.Natl.Acad.Sci.USA, 121, 2024

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PDB entries from 2024-07-10

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