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1ZRN
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BU of 1zrn by Molmil
INTERMEDIATE STRUCTURE OF L-2-HALOACID DEHALOGENASE WITH MONOCHLOROACETATE
Descriptor: ACETIC ACID, L-2-HALOACID DEHALOGENASE
Authors:Li, Y.-F, Hata, Y, Fujii, T, Hisano, T, Nishihara, M, Kurihara, T, Esaki, N.
Deposit date:1998-03-03
Release date:1999-03-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Crystal structures of reaction intermediates of L-2-haloacid dehalogenase and implications for the reaction mechanism.
J.Biol.Chem., 273, 1998
3EBF
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BU of 3ebf by Molmil
Structure of inhibited murine iNOS oxygenase domain
Descriptor: (3R)-3-[(1,2,3,4-tetrahydroisoquinolin-7-yloxy)methyl]-2,3-dihydrothieno[2,3-f][1,4]oxazepin-5-amine, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stuehr, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-27
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3ZHO
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BU of 3zho by Molmil
X-ray structure of E.coli Wrba in complex with FMN at 1.2 A resolution
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVOPROTEIN WRBA
Authors:Kishko, I, Lapkouski, M, Brynda, J, Kuty, M, Carey, J, Smatanova, I.K, Ettrich, R.
Deposit date:2012-12-23
Release date:2013-08-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:1.2 A Resolution Crystal Structure of Escherichia Coli Wrba Holoprotein
Acta Crystallogr.,Sect.D, 69, 2013
9DLW
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BU of 9dlw by Molmil
Crystal structure of the ternary complex of DCAF1 and WDR5 with PROTAC, OICR-41114
Descriptor: DDB1- and CUL4-associated factor 1, N-{(1P)-5'-({(32E)-33-[(3P)-4-{[(1S)-3-amino-1-(3-chloro-4-fluorophenyl)-3-oxopropyl]carbamoyl}-3-(4-chloro-2-fluorophenyl)-1H-pyrrol-2-yl]-31-oxo-3,6,9,12,15,18,21,24,27-nonaoxa-30-azatritriacont-32-en-1-yl}carbamoyl)-2'-fluoro-4-[(3R,5S)-3,4,5-trimethylpiperazin-1-yl][1,1'-biphenyl]-3-yl}-6-oxo-4-(trifluoromethyl)-1,6-dihydropyridine-3-carboxamide, WD repeat-containing protein 5
Authors:Mabanglo, M.F, Mamai, A, Wilson, B.J, Hoffer, L, Al-awar, R, Vedadi, M.
Deposit date:2024-09-11
Release date:2024-11-06
Last modified:2024-12-04
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structures of DCAF1-PROTAC-WDR5 ternary complexes provide insight into DCAF1 substrate specificity.
Nat Commun, 15, 2024
3EHB
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BU of 3ehb by Molmil
A D-Pathway Mutation Decouples the Paracoccus Denitrificans Cytochrome c Oxidase by Altering the side chain orientation of a distant, conserved Glutamate
Descriptor: CALCIUM ION, COPPER (II) ION, Cytochrome c oxidase subunit 1-beta, ...
Authors:Koepke, J, Mueller, H, Peng, G.
Deposit date:2008-09-12
Release date:2008-09-30
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:A d-pathway mutation decouples the paracoccusdenitrificans cytochrome C oxidase by altering the side-chain orientation of a distant conserved glutamate.
J.Mol.Biol., 384, 2008
3EL2
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BU of 3el2 by Molmil
Crystal Structure of Monomeric Actin Bound to Ca-ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Actin-5C, CALCIUM ION
Authors:Nair, U.B, Joel, P.B, Wan, Q, Lowey, S, Rould, M.A, Trybus, K.M.
Deposit date:2008-09-19
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of monomeric actin bound to cytochalasin D.
J.Mol.Biol., 384, 2008
3E2O
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BU of 3e2o by Molmil
Crystal structure of cytochrome c peroxidase, N184R mutant
Descriptor: Cytochrome c peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Poulos, T.L, Meharenna, Y.T, Oertel, P.
Deposit date:2008-08-05
Release date:2008-10-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Engineering ascorbate peroxidase activity into cytochrome c peroxidase.
Biochemistry, 47, 2008
9DOD
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BU of 9dod by Molmil
Crystal structure of PRMT5:MEP50 in complex with PRT543
Descriptor: 1,2-ETHANEDIOL, 7-[(3xi,5R)-5-C-(3,4-dichlorophenyl)-3-C-methyl-beta-D-ribofuranosyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine, Methylosome protein WDR77, ...
Authors:Leal, R.A, Pitis, P.M, Dou, Y, Lin, H, Wang, M, Xu, C.
Deposit date:2024-09-18
Release date:2025-02-12
Last modified:2025-03-19
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Phase Ib study of PRT543, an oral protein arginine methyltransferase 5 (PRMT5) inhibitor, in patients with advanced splicing factor-mutant myeloid malignancies.
Leukemia, 39, 2025
3EBD
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BU of 3ebd by Molmil
Structure of inhibited murine iNOS oxygenase domain
Descriptor: (2S)-2-methyl-2,3-dihydrothieno[2,3-f][1,4]oxazepin-5-amine, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stuehr, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-27
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
9D5Z
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BU of 9d5z by Molmil
Crystal structure of the human WDR5 in complex with LH168 compound
Descriptor: (3P)-N-[(2S)-1-(6,7-dihydrothieno[3,2-c]pyridin-5(4H)-yl)-1-oxopentan-2-yl]-3-[1-ethyl-3-(trifluoromethyl)-1H-pyrazol-4-yl]-5-[(1H-imidazol-1-yl)methyl]benzamide, 1,2-ETHANEDIOL, WD repeat-containing protein 5
Authors:Kimani, S, Dong, A, Hoffmann, L, Nemec, V, Ackloo, S, Muller-Knapp, S, Knapp, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2024-08-14
Release date:2025-02-19
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the human WDR5 in complex with LH168 compound
To be published
3EDJ
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BU of 3edj by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cycloheptakis-(1-4)-(alpha-D-glucopyranose), Cyclomaltodextrinase, ...
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
3EDE
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BU of 3ede by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cyclomaltodextrinase, GLYCEROL
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
3E65
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BU of 3e65 by Molmil
Murine INOS dimer with HEME, pterin and inhibitor AR-C120011
Descriptor: 1-[4-(AMINOMETHYL)BENZOYL]-5'-FLUORO-1'H-SPIRO[PIPERIDINE-4,2'-QUINAZOLIN]-4'-AMINE, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Rosenfeld, R.J, Garcin, E.D, Getzoff, E.D.
Deposit date:2008-08-14
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3E6N
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BU of 3e6n by Molmil
Structure of murine INOS oxygenase domain with inhibitor AR-C125813
Descriptor: 4-METHYL-6-PROPYLPYRIDIN-2-AMINE, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stueh, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-15
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
3EAI
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BU of 3eai by Molmil
Structure of inhibited murine iNOS oxygenase domain
Descriptor: 4-({4-[(4-methoxypyridin-2-yl)amino]piperidin-1-yl}carbonyl)benzonitrile, 5,6,7,8-TETRAHYDROBIOPTERIN, Nitric oxide synthase, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stuehr, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-25
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008
9E3A
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BU of 9e3a by Molmil
Cryo-EM structure of PRMT5/WDR77 in complex with 6S complex (pICln PBM local refinement)
Descriptor: Methylosome protein WDR77, Methylosome subunit pICln, Protein arginine N-methyltransferase 5
Authors:Jin, C.Y, Hunkeler, M, Fischer, E.S.
Deposit date:2024-10-23
Release date:2025-02-19
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Substrate adaptors are flexible tethering modules that enhance substrate methylation by the arginine methyltransferase PRMT5.
J.Biol.Chem., 301, 2025
3EBA
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BU of 3eba by Molmil
CAbHul6 FGLW mutant (humanized) in complex with human lysozyme
Descriptor: CAbHul6, Lysozyme C, SULFATE ION
Authors:Loris, R, Vincke, C, Saerens, D, Martinez-Rodriguez, S, Muyldermans, S, Conrath, K.
Deposit date:2008-08-27
Release date:2008-12-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:General Strategy to Humanize a Camelid Single-domain Antibody and Identification of a Universal Humanized Nanobody Scaffold
J.Biol.Chem., 284, 2009
9E3B
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BU of 9e3b by Molmil
Cryo-EM structure of PRMT5/WDR77 in complex with 6S complex
Descriptor: Methylosome protein WDR77, Methylosome subunit pICln, Protein arginine N-methyltransferase 5, ...
Authors:Jin, C.Y, Hunkeler, M, Fischer, E.S.
Deposit date:2024-10-23
Release date:2025-02-19
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Substrate adaptors are flexible tethering modules that enhance substrate methylation by the arginine methyltransferase PRMT5.
J.Biol.Chem., 301, 2025
3EKU
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BU of 3eku by Molmil
Crystal Structure of Monomeric Actin bound to Cytochalasin D
Descriptor: (3S,3aR,4S,6S,6aR,7E,10S,12R,13E,15R,15aR)-3-benzyl-6,12-dihydroxy-4,10,12-trimethyl-5-methylidene-1,11-dioxo-2,3,3a,4,5,6,6a,9,10,11,12,15-dodecahydro-1H-cycloundeca[d]isoindol-15-yl acetate, ADENOSINE-5'-TRIPHOSPHATE, Actin-5C, ...
Authors:Nair, U.B, Joel, P.B, Wan, Q, Lowey, S, Rould, M.A, Trybus, K.M.
Deposit date:2008-09-19
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of monomeric actin bound to cytochalasin D.
J.Mol.Biol., 384, 2008
3E77
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BU of 3e77 by Molmil
Human phosphoserine aminotransferase in complex with PLP
Descriptor: GLYCEROL, PYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase
Authors:Lehtio, L, Karlberg, T, Andersson, J, Arrowsmith, C.H, Berglund, H, Bountra, C, Collins, R, Dahlgren, L.G, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, A, Johansson, I, Kotenyova, T, Moche, M, Nilsson, M.E, Nordlund, P, Nyman, T, Olesen, K, Persson, C, Sagemark, J, Thorsell, S.G, Tresaugues, L, Van Den Berg, S, Welin, M, Wikstrom, M, Wisniewska, M, Weigelt, J, Schueler, H, Structural Genomics Consortium (SGC)
Deposit date:2008-08-18
Release date:2008-08-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human phosphoserine aminotransferase in complex with PLP
TO BE PUBLISHED
9E2G
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BU of 9e2g by Molmil
Cryo-EM structure of 48 nm repeat of microtubule doublet from T. brucei flagellum
Descriptor: CCDC81 HU domain-containing protein, CMF34/CARP4, Calcium-binding protein, ...
Authors:Xia, X, Shimogawa, M.M, Wang, H, Liu, S, Wijono, A, Langousis, G, Kassem, A.M, Wohlschlegel, J.A, Hill, K, Zhou, Z.H.
Deposit date:2024-10-22
Release date:2025-03-12
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Trypanosome doublet microtubule structures reveal flagellum assembly and motility mechanisms.
Science, 387, 2025
9E78
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BU of 9e78 by Molmil
48-nm repeat of the Leishmania tarentolae doublet microtubule
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ArcMAP1, ArcMAP2, ...
Authors:Doran, M.H, Ren, P, Hoog, J.L, Brown, A.
Deposit date:2024-11-01
Release date:2025-03-12
Last modified:2025-03-26
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Evolutionary adaptations of doublet microtubules in trypanosomatid parasites.
Science, 387, 2025
3EDK
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BU of 3edk by Molmil
Structural base for cyclodextrin hydrolysis
Descriptor: CALCIUM ION, Cyclomaltodextrinase, Cyclooctakis-(1-4)-(alpha-D-glucopyranose), ...
Authors:Buedenbender, S, Schulz, G.E.
Deposit date:2008-09-03
Release date:2009-03-03
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
9DQH
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BU of 9dqh by Molmil
CryoEM structure of Gq-coupled MRGPRD with a new agonist EP-2825
Descriptor: 2-({1-[2-(4-chlorophenyl)-2-methylpropanoyl]piperidin-4-yl}amino)-5,6,7,8-tetrahydroquinazolin-4(3H)-one, Gs-mini-Gq chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Cao, C, Wang, C, Liu, Y, Fay, J.F, Roth, B.L.
Deposit date:2024-09-24
Release date:2024-12-11
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:High-affinity agonists reveal recognition motifs for the MRGPRD GPCR.
Cell Rep, 43, 2024
3E68
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BU of 3e68 by Molmil
Structure of murine INOS oxygenase domain with inhibitor AR-C130232
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, N-[2-(6-AMINO-4-METHYLPYRIDIN-2-YL)ETHYL]-4-CYANOBENZAMIDE, ...
Authors:Garcin, E.D, Arvai, A.S, Rosenfeld, R.J, Kroeger, M.D, Crane, B.R, Andersson, G, Andrews, G, Hamley, P.J, Mallinder, P.R, Nicholls, D.J, St-Gallay, S.A, Tinker, A.C, Gensmantel, N.P, Mete, A, Cheshire, D.R, Connolly, S, Stueh, D.J, Aberg, A, Wallace, A.V, Tainer, J.A, Getzoff, E.D.
Deposit date:2008-08-14
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Anchored plasticity opens doors for selective inhibitor design in nitric oxide synthase.
Nat.Chem.Biol., 4, 2008

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