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8DCF
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BU of 8dcf by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Cu2+ and GTP
Descriptor: CHLORIDE ION, COPPER (II) ION, GLYCEROL, ...
Authors:Jacewicz, A, Dantuluri, S, Shuman, S.
Deposit date:2022-06-16
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
8DCA
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BU of 8dca by Molmil
RNA ligase RtcB from Pyrococcus horikoshii in complex with Co2+ and GTP
Descriptor: COBALT (II) ION, GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Jacewicz, A, Dantuluri, S, Shuman, S.
Deposit date:2022-06-16
Release date:2022-10-12
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structures of RNA ligase RtcB in complexes with divalent cations and GTP.
Rna, 28, 2022
4H8K
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BU of 4h8k by Molmil
Crystal structure of LC11-RNase H1 in complex with RNA/DNA hybrid
Descriptor: DNA (5'-D(*GP*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*CP*G)-3'), RNA (5'-R(*CP*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*CP*C)-3'), Ribonuclease H
Authors:Nguyen, T.N, You, D.J, Matsumoto, H, Kanaya, E, Kanaya, S.
Deposit date:2012-09-23
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of metagenome-derived LC11-RNase H1 in complex with RNA/DNA hybrid
J.Struct.Biol., 182, 2013
3I7F
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BU of 3i7f by Molmil
Aspartyl tRNA synthetase from Entamoeba histolytica
Descriptor: Aspartyl-tRNA synthetase
Authors:Arakaki, T, Merritt, E.A, Medical Structural Genomics of Pathogenic Protozoa (MSGPP)
Deposit date:2009-07-08
Release date:2009-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the aspartyl-tRNA synthetase from Entamoeba histolytica.
Mol.Biochem.Parasitol., 169, 2010
1MME
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BU of 1mme by Molmil
THE CRYSTAL STRUCTURE OF AN ALL-RNA HAMMERHEAD RIBOZYME: A PROPOSED MECHANISM FOR RNA CATALYTIC CLEAVAGE
Descriptor: RNA HAMMERHEAD RIBOZYME
Authors:Scott, W.G, Finch, J.T, Klug, A.
Deposit date:1995-12-09
Release date:1996-02-06
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage.
Cell(Cambridge,Mass.), 81, 1995
7UME
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BU of 7ume by Molmil
DENV1 SLA top stemloop RNA (DenvTSL)
Descriptor: RNA (28-MER)
Authors:Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-04-06
Release date:2022-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the dengue virus RNA promoter.
Rna, 28, 2022
7UMD
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BU of 7umd by Molmil
DENV1 SLA three-way junction RNA (DenvSLAsh)
Descriptor: RNA (40-MER)
Authors:Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-04-06
Release date:2022-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the dengue virus RNA promoter.
Rna, 28, 2022
7UMC
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BU of 7umc by Molmil
DENV1 SLA RNA (DenvSLATL)
Descriptor: RNA (70-MER)
Authors:Sun, Y.T, Varani, G, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2022-04-06
Release date:2022-07-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of the dengue virus RNA promoter.
Rna, 28, 2022
1NEM
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BU of 1nem by Molmil
Saccharide-RNA recognition in the neomycin B / RNA aptamer complex
Descriptor: 2,6-diamino-2,6-dideoxy-alpha-D-glucopyranose, 2,6-diamino-2,6-dideoxy-beta-L-idopyranose-(1-3)-beta-D-ribofuranose, 2-DEOXY-D-STREPTAMINE, ...
Authors:Jiang, L, Majumdar, A, Hu, W, Jaishree, T.J, Xu, W, Patel, D.J.
Deposit date:1999-03-15
Release date:1999-08-31
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Saccharide-RNA recognition in a complex formed between neomycin B and an RNA aptamer
Structure Fold.Des., 7, 1999
2OV4
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BU of 2ov4 by Molmil
Crystal structure of B. stearothermophilus tryptophanyl tRNA synthetase in complex with adenosine tetraphosphate
Descriptor: ADENOSINE-5'-TETRAPHOSPHATE, ANILINE, CESIUM ION, ...
Authors:Retailleau, P, Carter Jr, C.W.
Deposit date:2007-02-12
Release date:2007-03-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with Adenosine-5' Tetraphosphate: Evidence for Distributed Use of Catalytic Binding Energy in Amino Acid Activation by Class I Aminoacyl-tRNA Synthetases.
J.Mol.Biol., 369, 2007
2RLU
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BU of 2rlu by Molmil
The Three Dimensional Structure of the Moorella thermoacetica Selenocysteine Insertion Sequence RNA Hairpin and its Interaction with the Elongation factor SelB
Descriptor: RNA (5'-R(*GP*GP*UP*UP*GP*CP*GP*GP*GP*UP*CP*UP*CP*GP*CP*AP*AP*CP*C)-3')
Authors:Beribisky, A.V, Tavares, T.J, Amborski, A.N, Motamed, M, Johnson, A.E, Mark, T.L, Johnson, P.E.
Deposit date:2007-08-21
Release date:2008-02-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The three-dimensional structure of the Moorella thermoacetica selenocysteine insertion sequence RNA hairpin and its interaction with the elongation factor SelB
Rna, 13, 2007
2TPK
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BU of 2tpk by Molmil
AN INVESTIGATION OF THE STRUCTURE OF THE PSEUDOKNOT WITHIN THE GENE 32 MESSENGER RNA OF BACTERIOPHAGE T2 USING HETERONUCLEAR NMR METHODS
Descriptor: RNA (MRNA PSEUDOKNOT)
Authors:Holland, J.A, Hansen, M.R, Du, Z, Hoffman, D.W.
Deposit date:1998-10-28
Release date:1998-11-04
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:An examination of coaxial stacking of helical stems in a pseudoknot motif: the gene 32 messenger RNA pseudoknot of bacteriophage T2.
Rna, 5, 1999
1DQH
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BU of 1dqh by Molmil
CRYSTAL STRUCTURE OF HELIX II OF THE X. LAEVIS SOMATIC 5S RRNA WITH A CYTOSINE BULGE IN TWO CONFORMATIONS
Descriptor: RNA (5'-R(*CP*AP*GP*GP*GP*UP*CP*GP*GP*C)-3'), RNA (5'-R(*GP*CP*CP*AP*CP*CP*CP*UP*G)-3')
Authors:Xiong, Y, Sundaralingam, M.
Deposit date:2000-01-04
Release date:2000-11-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Two crystal forms of helix II of Xenopus laevis 5S rRNA with a cytosine bulge.
RNA, 6, 2000
6DFU
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BU of 6dfu by Molmil
Tryptophan--tRNA ligase from Haemophilus influenzae.
Descriptor: TRYPTOPHAN, Tryptophan--tRNA ligase
Authors:Osipiuk, J, Maltseva, N, Mulligan, R, Grimshaw, S, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-05-15
Release date:2018-05-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Tryptophan--tRNA ligase from Haemophilus influenzae.
to be published
6A88
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BU of 6a88 by Molmil
Crystal Structure of T. gondii prolyl tRNA synthetase with Febrifugine and ATP Analog
Descriptor: 3-{3-[(2R,3S)-3-hydroxypiperidin-2-yl]-2-oxopropyl}quinazolin-4(3H)-one, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Kumari, S, Mishra, S, Yogavel, M, Sharma, A.
Deposit date:2018-07-06
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.596 Å)
Cite:Conformational heterogeneity in apo and drug-bound structures of Toxoplasma gondii prolyl-tRNA synthetase.
Acta Crystallogr.,Sect.F, 75, 2019
6AA0
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BU of 6aa0 by Molmil
Crystal Structure of Toxoplasma gondii Prolyl tRNA Synthetase (TgPRS) in Apo Form
Descriptor: GLYCEROL, Prolyl-tRNA synthetase (ProRS)
Authors:Mishra, S, Kumari, S, Sharma, A, Yogavel, M.
Deposit date:2018-07-16
Release date:2019-10-23
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational heterogeneity in apo and drug-bound structures of Toxoplasma gondii prolyl-tRNA synthetase.
Acta Crystallogr.,Sect.F, 75, 2019
2N7M
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BU of 2n7m by Molmil
NMR-SAXS/WAXS Structure of the core of the U4/U6 di-snRNA
Descriptor: RNA (92-MER)
Authors:Cornilescu, G, Didychuk, A.L, Rodgers, M.L, Michael, L.A, Burke, J.E, Montemayor, E.J, Hoskins, A.A, Butcher, S.E, Tonelli, M.
Deposit date:2015-09-14
Release date:2015-12-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Analysis of Multi-Helical RNAs by NMR-SAXS/WAXS: Application to the U4/U6 di-snRNA.
J.Mol.Biol., 428, 2016
3D0M
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BU of 3d0m by Molmil
X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex
Descriptor: RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
Authors:Rypniewski, W, Adamiak, D.A, Milecki, J, Adamiak, R.W.
Deposit date:2008-05-02
Release date:2008-09-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
3Q0I
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BU of 3q0i by Molmil
Methionyl-tRNA formyltransferase from Vibrio cholerae
Descriptor: GLYCEROL, Methionyl-tRNA formyltransferase, SULFATE ION
Authors:Osipiuk, J, Gu, M, Papazisi, L, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2010-12-15
Release date:2010-12-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Methionyl-tRNA formyltransferase from Vibrio cholerae.
To be Published
4TTV
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BU of 4ttv by Molmil
Crystal structure of human ThrRS complexing with a bioengineered macrolide BC194
Descriptor: (1R,2R)-2-[(2S,6E,8R,9S,11R,13S,15S,16S)-7-cyano-8,16-dihydroxy-9,11,13,15-tetramethyl-18-oxooxacyclooctadec-6-en-2-yl]cyclobutanecarboxylic acid, Threonine--tRNA ligase, cytoplasmic, ...
Authors:Fang, P, Guo, M.
Deposit date:2014-06-23
Release date:2015-09-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Aminoacyl-tRNA synthetase dependent angiogenesis revealed by a bioengineered macrolide inhibitor.
Sci Rep, 5, 2015
2J5B
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BU of 2j5b by Molmil
Structure of the Tyrosyl tRNA synthetase from Acanthamoeba polyphaga Mimivirus complexed with tyrosynol
Descriptor: 4-[(2S)-2-amino-3-hydroxypropyl]phenol, TYROSYL-TRNA SYNTHETASE
Authors:Abergel, C, Rudinger-thirion, J, Giege, R, Claverie, J.M.
Deposit date:2006-09-13
Release date:2007-09-25
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Virus-Encoded Aminoacyl-tRNA Synthetases: Structural and Functional Characterization of Mimivirus Tyrrs and Metrs.
J.Virol., 81, 2007
1YGB
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BU of 1ygb by Molmil
Crystal Structure of the catalytic fragment of alanyl-tRNA synthetase in complex with L-serine
Descriptor: Alanyl-tRNA synthetase, SERINE
Authors:Swairjo, M.A, Schimmel, P.R.
Deposit date:2005-01-04
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 102, 2005
1YFT
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BU of 1yft by Molmil
The crystal structure of the catalytic fragment of alanyl-tRNA synthetase in complex wtih glycine
Descriptor: Alanyl-tRNA synthetase, GLYCINE
Authors:Swairjo, M.A, Schimmel, P.R.
Deposit date:2005-01-03
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 102, 2005
5THL
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BU of 5thl by Molmil
Crystal structure of the human tyrosyl-tRNA synthetase mutant G41R
Descriptor: Tyrosine--tRNA ligase, cytoplasmic
Authors:Blocquel, D, Sajish, M, Yang, X.L.
Deposit date:2016-09-29
Release date:2017-06-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Alternative stable conformation capable of protein misinteraction links tRNA synthetase to peripheral neuropathy.
Nucleic Acids Res., 45, 2017
257D
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BU of 257d by Molmil
ALTERNATING AND NON-ALTERNATING DG-DC HEXANUCLEOTIDES CRYSTALLIZE AS CANONICAL A-DNA
Descriptor: DNA (5'-D(*GP*CP*CP*GP*GP*C)-3')
Authors:Mooers, B.H, Schroth, G.P, Baxter, W.W, Ho, P.S.
Deposit date:1996-03-31
Release date:1996-04-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Alternating and non-alternating dG-dC hexanucleotides crystallize as canonical A-DNA.
J.Mol.Biol., 249, 1995

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