Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VEU
DownloadVisualize
BU of 5veu by Molmil
Human Cytochrome P450 3A5 (CYP3A5)
Descriptor: Cytochrome P450 3A5, PROTOPORPHYRIN IX CONTAINING FE, RITONAVIR
Authors:Hsu, M.-H, Johnson, E.F.
Deposit date:2017-04-05
Release date:2017-11-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:The X-Ray Crystal Structure of the Human Mono-Oxygenase Cytochrome P450 3A5-Ritonavir Complex Reveals Active Site Differences between P450s 3A4 and 3A5.
Mol. Pharmacol., 93, 2018
5VH2
DownloadVisualize
BU of 5vh2 by Molmil
Crystal Structure of Mouse Cadherin-23 EC12-13 with Engineered Mutation S1339D
Descriptor: CALCIUM ION, Cadherin-23, SODIUM ION
Authors:Termine, D.J, Jaiganesh, A, Sotomayor, M.
Deposit date:2017-04-12
Release date:2018-04-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
Structure, 26, 2018
5AAF
DownloadVisualize
BU of 5aaf by Molmil
Aurora A kinase bound to an imidazopyridine inhibitor (14a)
Descriptor: 3-((4-(6-chloro-2-(1,3-dimethyl-1H-pyrazol-4-yl)-3H-imidazo[4,5-b]pyridin-7-yl)-1H-pyrazol-1-yl)methyl)-N,N-dimethylbenzamide, AURORA KINASE A
Authors:McIntyre, P.J, Bayliss, R.
Deposit date:2015-07-24
Release date:2015-09-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:7-(Pyrazol-4-Yl)-3H-Imidazo[4,5-B]Pyridine-Based Derivatives for Kinase Inhibition: Co-Crystallisation Studies with Aurora-A Reveal Distinct Differences in the Orientation of the Pyrazole N1-Substituent.
Bioorg.Med.Chem.Lett., 25, 2015
8XFY
DownloadVisualize
BU of 8xfy by Molmil
The Crystal Structure of RSK2 from Biortus.
Descriptor: 2,6-bis(fluoranyl)-4-[4-(4-morpholin-4-ylphenyl)pyridin-3-yl]phenol, Ribosomal protein S6 kinase alpha-3
Authors:Wang, F, Cheng, W, Lv, Z, Lin, D, Pan, W.
Deposit date:2023-12-14
Release date:2024-03-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Crystal Structure of RSK2 from Biortus.
To Be Published
6Q2U
DownloadVisualize
BU of 6q2u by Molmil
Structure of Cytochrome C4 from Pseudomonas aeruginosa
Descriptor: Cytochrome c4, HEME C
Authors:Carpenter, J.M, Zhong, F, Pletneva, E.V, Ragusa, M.J.
Deposit date:2019-08-08
Release date:2019-11-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and redox properties of the diheme electron carrier cytochrome c4from Pseudomonas aeruginosa.
J.Inorg.Biochem., 203, 2019
6F4H
DownloadVisualize
BU of 6f4h by Molmil
Crystal structure of the Drosophila melanogaster SNF/U1-SL2 complex
Descriptor: CITRATE ANION, U1 small nuclear ribonucleoprotein A, U1-SL2
Authors:Weber, G, Holton, N, Hall, K.B, DeKoster, G, Wahl, M.C.
Deposit date:2017-11-29
Release date:2018-06-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular principles underlying dual RNA specificity in the Drosophila SNF protein.
Nat Commun, 9, 2018
7S48
DownloadVisualize
BU of 7s48 by Molmil
PAK4cat in complex with Integrin beta5 760-770 peptide
Descriptor: Integrin beta-5, Serine/threonine-protein kinase PAK 4
Authors:Ha, B.H, Boggon, T.J.
Deposit date:2021-09-08
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4)
Commun Biol, 5, 2022
6Q3F
DownloadVisualize
BU of 6q3f by Molmil
CDK2 in complex with FragLite2
Descriptor: 4-bromanylpyridin-2-amine, Cyclin-dependent kinase 2
Authors:Wood, D.J, Martin, M.P, Noble, M.E.M.
Deposit date:2018-12-04
Release date:2019-03-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:FragLites-Minimal, Halogenated Fragments Displaying Pharmacophore Doublets. An Efficient Approach to Druggability Assessment and Hit Generation.
J.Med.Chem., 62, 2019
7S6V
DownloadVisualize
BU of 7s6v by Molmil
Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474
Descriptor: 1,2-ETHANEDIOL, 3-({4-[2-(3-chloroanilino)pyrimidin-4-yl]pyridin-2-yl}amino)propan-1-ol, Glycogen synthase kinase 3, ...
Authors:dos Reis, C.V, Ramos, P.Z, Counago, R.M.
Deposit date:2021-09-15
Release date:2022-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Leishmania infantum Glycogen Synthase Kinase 3 beta bound to CGP60474
To Be Published
8WM0
DownloadVisualize
BU of 8wm0 by Molmil
Crystal structure of TNIK-thiopeptide wTP3 complex
Descriptor: ADENOSINE, THIOPEPTIDE wTP3, TRAF2 and NCK-interacting protein kinase
Authors:Hamada, K, Kobayashi, S, Vinogradov, A.A, Zhang, Y, Goto, Y, Suga, H, Ogata, K, Sengoku, T.
Deposit date:2023-10-01
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A Compact Reprogrammed Genetic Code for De Novo Discovery of Proteolytically Stable Thiopeptides.
J.Am.Chem.Soc., 2024
6QCB
DownloadVisualize
BU of 6qcb by Molmil
Crystal structure of human cathepsin D in complex with macrocyclic inhibitor 9
Descriptor: (3~{S},7~{S},8~{S})-7-oxidanyl-8-(phenylmethyl)-3-propan-2-yl-1,4,9-triazacyclohenicosane-2,5,10-trione, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Cathepsin D, ...
Authors:Brynda, J, Houstecka, R, Majer, P, Mares, M.
Deposit date:2018-12-27
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Biomimetic Macrocyclic Inhibitors of Human Cathepsin D: Structure-Activity Relationship and Binding Mode Analysis.
J.Med.Chem., 63, 2020
7S46
DownloadVisualize
BU of 7s46 by Molmil
PAK4cat (D440N/S474E) in complex with Integrin beta5 760-770 peptide
Descriptor: Integrin beta-5, Isoform 2 of Serine/threonine-protein kinase PAK 4, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Ha, B.H, Boggon, T.J.
Deposit date:2021-09-08
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular basis for integrin adhesion receptor binding to p21-activated kinase 4 (PAK4)
Commun Biol, 5, 2022
5VD5
DownloadVisualize
BU of 5vd5 by Molmil
CRYSTAL STRUCTURE OF HUMAN WEE1 KINASE DOMAIN IN COMPLEX WITH RAC-IV-050, a MK1775 analougue
Descriptor: 1-[6-(2-hydroxypropan-2-yl)pyridin-2-yl]-6-{[4-(morpholin-4-yl)phenyl]amino}-2-(prop-2-en-1-yl)-1,2-dihydro-3H-pyrazolo [3,4-d]pyrimidin-3-one, CHLORIDE ION, Wee1-like protein kinase
Authors:Zhu, J.-Y, Schonbrunn, E.
Deposit date:2017-04-01
Release date:2018-04-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of Wee family kinase inhibition by small molecules
to be published
4PDP
DownloadVisualize
BU of 4pdp by Molmil
Crystal structure of Rad53 kinase domain and SCD2
Descriptor: Serine/threonine-protein kinase RAD53
Authors:Wybenga-Groot, L.E, Ho, C.S, Ceccarelli, D.F, Sicheri, F.
Deposit date:2014-04-19
Release date:2014-05-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.591 Å)
Cite:Structural basis of Rad53 kinase activation by dimerization and activation segment exchange.
Cell Signal., 26, 2014
7SJB
DownloadVisualize
BU of 7sjb by Molmil
Crystal structure of dehaloperoxidase B in complex with alpha-terpinene
Descriptor: 1-methyl-4-(propan-2-yl)cyclohexa-1,3-diene, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
Deposit date:2021-10-17
Release date:2022-11-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.718 Å)
Cite:The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
5VET
DownloadVisualize
BU of 5vet by Molmil
PHOSPHOLIPASE A2, RE-REFINEMENT OF THE PDB STRUCTURE 1JQ8 WITHOUT THE PUTATIVE COMPLEXED OLIGOPEPTIDE
Descriptor: Phospholipase A2 VRV-PL-VIIIa
Authors:Wlodawer, A, Dauter, Z, Minor, W, Stanfield, R, Porebski, P, Jaskolski, M, Pozharski, E, Weichenberger, C.X, Rupp, B.
Deposit date:2017-04-05
Release date:2018-06-20
Last modified:2022-04-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Detect, correct, retract: How to manage incorrect structural models.
FEBS J., 285, 2018
7SJE
DownloadVisualize
BU of 7sje by Molmil
Crystal structure of dehaloperoxidase B in complex with p-cymene
Descriptor: 1-methyl-4-(1-methylethyl)benzene, Dehaloperoxidase B, OXYGEN MOLECULE, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
Deposit date:2021-10-17
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
4PFO
DownloadVisualize
BU of 4pfo by Molmil
Myosin VI motor domain in the Pi release state, space group P212121
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Isabet, T, Benisty, H, Llinas, P, Sweeney, H.L, Houdusse, A.
Deposit date:2014-04-30
Release date:2015-04-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:How actin initiates the motor activity of Myosin.
Dev.Cell, 33, 2015
6Q6P
DownloadVisualize
BU of 6q6p by Molmil
Antarctic fish cytoglobin 1 from D.mawsoni
Descriptor: Cytoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Giordano, D, Pesce, A, Vermeylen, S, Abbruzzetti, S, Nardini, M, Marchesani, F, Berghmans, H, Seira, C, Bruno, S, Luque, F.J, di Prisco, G, Ascenzi, P, Dewilde, S, Bolognesi, M, Viappiani, C, Verde, C.
Deposit date:2018-12-11
Release date:2020-01-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional properties of Antarctic fish cytoglobins-1: Cold-reactivity in multi-ligand reactions.
Comput Struct Biotechnol J, 18, 2020
7SJD
DownloadVisualize
BU of 7sjd by Molmil
Crystal structure of dehaloperoxidase B in complex with terpinolene
Descriptor: 1-methyl-4-(propan-2-ylidene)cyclohex-1-ene, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Yun, D, Malewschik, T.
Deposit date:2021-10-17
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
7SJI
DownloadVisualize
BU of 7sji by Molmil
Crystal structure of dehaloperoxidase B in complex with R-(+)-limonene
Descriptor: (4R)-1-methyl-4-(prop-1-en-2-yl)cyclohex-1-ene, Dehaloperoxidase B, GLYCEROL, ...
Authors:Ghiladi, R.A, de Serrano, V.S, Malewschik, T, Yun, D.
Deposit date:2021-10-17
Release date:2022-11-23
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The Multifunctional Globin Dehaloperoxidase as a Biocatalyst in the Oxidation of Monoterpenes
To Be Published
6QDZ
DownloadVisualize
BU of 6qdz by Molmil
P38 alpha complex with AR117045
Descriptor: 1-[5-~{tert}-butyl-2-(4-methylphenyl)pyrazol-3-yl]-3-[(1~{S},4~{S})-4-[(3-propan-2-yl-[1,2,4]triazolo[4,3-a]pyridin-6-yl)oxy]-1,2,3,4-tetrahydronaphthalen-1-yl]urea, 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, Mitogen-activated protein kinase 14
Authors:Brown, D.G, Hurley, C, Irving, S.L.
Deposit date:2019-01-03
Release date:2020-01-29
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:P38 alpha complex with AR117045
To Be Published
6F88
DownloadVisualize
BU of 6f88 by Molmil
Crystal structure of cytochrome P450 CYP260A1 (S276N) bound with progesterone
Descriptor: Cytochrome P450 CYP260A1, PROGESTERONE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Jozwik, I.K, Thunnissen, A.M.W.H.
Deposit date:2017-12-12
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure-Based Engineering of Steroidogenic CYP260A1 for Stereo- and Regioselective Hydroxylation of Progesterone.
ACS Chem. Biol., 13, 2018
6F9Y
DownloadVisualize
BU of 6f9y by Molmil
Lysozyme crystallized in presence of 10 mM lithium sulphate at pH 4.5
Descriptor: CHLORIDE ION, Lysozyme C, SULFATE ION
Authors:Camara-Artigas, A.
Deposit date:2017-12-15
Release date:2018-05-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Orthorhombic lysozyme crystallization at acidic pH values driven by phosphate binding.
Acta Crystallogr D Struct Biol, 74, 2018
6QHO
DownloadVisualize
BU of 6qho by Molmil
Dual specificity mitogen-activated protein kinase kinase 7 in complex with pyrazolopyrimidine 1a
Descriptor: 1-[(3~{R})-3-(4-azanylpyrazolo[3,4-d]pyrimidin-1-yl)piperidin-1-yl]propan-1-one, Dual specificity mitogen-activated protein kinase kinase 7
Authors:Wolle, P, Mueller, M.P, Rauh, D.
Deposit date:2019-01-17
Release date:2019-05-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Characterization of Covalent Pyrazolopyrimidine-MKK7 Complexes and a Report on a Unique DFG-in/Leu-in Conformation of Mitogen-Activated Protein Kinase Kinase 7 (MKK7).
J.Med.Chem., 62, 2019

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon