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3I0V
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BU of 3i0v by Molmil
Bacillus cereus metallo-beta-lactamase: apo form
Descriptor: Beta-lactamase 2
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
4MW7
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BU of 4mw7 by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(5-chloro-2-ethoxy-3-iodobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1469)
Descriptor: 1-{3-[(5-chloro-2-ethoxy-3-iodobenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
3I15
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Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 fully oxidized
Descriptor: Beta-lactamase 2, COBALT (II) ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I14
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BU of 3i14 by Molmil
Cobalt-substituted metallo-beta-lactamase from Bacillus cereus: residue Cys168 partially oxidized
Descriptor: Beta-lactamase 2, COBALT (II) ION, GLYCEROL
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
3I13
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BU of 3i13 by Molmil
Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 5.8
Descriptor: Beta-lactamase 2, ZINC ION
Authors:Gonzalez, J.M, Buschiazzo, A, Vila, A.J.
Deposit date:2009-06-25
Release date:2009-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Evidence of adaptability in metal coordination geometry and active-site loop conformation among B1 metallo-beta-lactamases .
Biochemistry, 49, 2010
4MKY
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BU of 4mky by Molmil
Polymerase Domain from Mycobacterium tuberculosis Ligase D in complex with an annealed double-strand DNA break.
Descriptor: 5'-D(*DGP*DCP*DCP*DGP*DCP*DAP*DGP*DTP*DAP*DC)-3', 5'-D(P*DGP*DCP*DGP*DGP*DC)-3', DNA ligase-like protein Rv0938/MT0965
Authors:Brissett, N.C, Doherty, A.J.
Deposit date:2013-09-05
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular Basis for DNA Double-Strand Break Annealing and Primer Extension by an NHEJ DNA Polymerase.
Cell Rep, 5, 2013
4MVW
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BU of 4mvw by Molmil
Trypanosoma brucei methionyl-tRNA synthetase in complex with inhibitor 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea (Chem 1433)
Descriptor: 1-{3-[(3,5-dichlorobenzyl)amino]propyl}-3-thiophen-3-ylurea, DIMETHYL SULFOXIDE, GLYCEROL, ...
Authors:Koh, C.Y, Kim, J.E, Wetzel, A.B, de van der Schueren, W.J, Shibata, S, Liu, J, Zhang, Z, Fan, E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-09-24
Release date:2014-04-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Structures of Trypanosoma brucei Methionyl-tRNA Synthetase with Urea-Based Inhibitors Provide Guidance for Drug Design against Sleeping Sickness.
Plos Negl Trop Dis, 8, 2014
4DG5
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BU of 4dg5 by Molmil
Crystal structure of staphylococcal Phosphoglycerate kinase
Descriptor: Phosphoglycerate kinase
Authors:Roychowdhury, A, Mukherjee, S, Dutta, D, Das, A.K.
Deposit date:2012-01-25
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure based functional analysis of Staphylococcal Phosphoglycerate kinase
To be Published
4N92
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BU of 4n92 by Molmil
Crystal structure of beta-lactamse PenP_E166S
Descriptor: Beta-lactamase
Authors:Pan, X, Wong, W, Zhao, Y.
Deposit date:2013-10-19
Release date:2014-09-10
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Perturbing the General Base Residue Glu166 in the Active Site of Class A beta-Lactamase Leads to Enhanced Carbapenem Binding and Acylation
Biochemistry, 53, 2014
4NWJ
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BU of 4nwj by Molmil
Crystal structure of phosphopglycerate mutase from Staphylococcus aureus in 3-phosphoglyceric acid bound form.
Descriptor: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, 3-PHOSPHOGLYCERIC ACID, MANGANESE (II) ION
Authors:Roychowdhury, A, Bose, M, Kundu, A, Gujar, A, Das, A.K.
Deposit date:2013-12-06
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Complete catalytic cycle of cofactor-independent phosphoglycerate mutase involves a spring-loaded mechanism
Febs J., 282, 2015
4NQW
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BU of 4nqw by Molmil
Structure of Mycobacterium tuberculosis extracytoplasmic function sigma factor SigK in complex with the cytosolic domain of its cognate anti-sigma factor RskA
Descriptor: Anti-sigma-K factor RskA, CADMIUM ION, ECF RNA polymerase sigma factor SigK
Authors:Shukla, J.K, Gopal, B.
Deposit date:2013-11-25
Release date:2014-01-22
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the redox sensitivity of the Mycobacterium tuberculosis SigK-RskA sigma-anti-sigma complex
Acta Crystallogr.,Sect.D, 70, 2014
4RG4
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BU of 4rg4 by Molmil
Epsilon-caprolactone-bound crystal structure of cyclohexanone monooxygenase in the Loose conformation
Descriptor: Caprolactone, Cyclohexanone monooxygenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Yachnin, B.J, Berghuis, A.M.
Deposit date:2014-09-29
Release date:2014-10-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Lactone-bound structures of cyclohexanone monooxygenase provide insight into the stereochemistry of catalysis.
Acs Chem.Biol., 9, 2014
4QTQ
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BU of 4qtq by Molmil
Structure of a Xanthomonas Type IV Secretion System related protein
Descriptor: CALCIUM ION, XAC2610 protein
Authors:Souza, D.P, Guzzo, C.R, Farah, C.S.
Deposit date:2014-07-08
Release date:2015-06-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bacterial killing via a type IV secretion system.
Nat Commun, 6, 2015
2QNZ
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BU of 2qnz by Molmil
Crystal structure of the complex between the mycobacterium beta-ketoacyl-acyl carrier protein synthase III (FABH) and SS-(2-hydroxyethyl)-O-decyl ester carbono(dithioperoxoic) acid
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3, BETA-MERCAPTOETHANOL, DECYL FORMATE
Authors:Sachdeva, S, Musayev, F, Alhamadsheh, M, Scarsdale, J.N, Wright, H.T, Reynolds, K.A.
Deposit date:2007-07-19
Release date:2008-05-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Separate Entrance and Exit Portals for Ligand Traffic in Mycobacterium tuberculosis FabH
Chem.Biol., 15, 2008
4O1N
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BU of 4o1n by Molmil
Crystal structure of Staphylococcal superantigen-like protein SAOUHSC_00383
Descriptor: GLYCEROL, Superantigen-like protein
Authors:Dutta, D, Dutta, A, Basak, A, Das, A.K.
Deposit date:2013-12-16
Release date:2014-12-24
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Staphylococcal superantigen-like protein SAOUHSC_00383
To be Published
4RMG
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BU of 4rmg by Molmil
Human Sirt2 in complex with SirReal2 and NAD+
Descriptor: 2-[(4,6-dimethylpyrimidin-2-yl)sulfanyl]-N-[5-(naphthalen-1-ylmethyl)-1,3-thiazol-2-yl]acetamide, NAD-dependent protein deacetylase sirtuin-2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Rumpf, T, Schiedel, M, Karaman, B, Roessler, C, North, B.J, Lehotzky, A, Olah, J, Ladwein, K.I, Schmidtkunz, K, Gajer, M, Pannek, M, Steegborn, C, Sinclair, D.A, Gerhardt, S, Ovadi, J, Schutkowski, M, Sippl, W, Einsle, O, Jung, M.
Deposit date:2014-10-21
Release date:2015-02-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Selective Sirt2 inhibition by ligand-induced rearrangement of the active site.
Nat Commun, 6, 2015
2QJB
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BU of 2qjb by Molmil
Crystal structure analysis of BMP-2 in complex with BMPR-IA variant IA/IB
Descriptor: Bone morphogenetic protein 2, Bone morphogenetic protein receptor type IA, CHLORIDE ION
Authors:Kotzsch, A, Mueller, T.D.
Deposit date:2007-07-06
Release date:2008-01-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure analysis of bone morphogenetic protein-2 type I receptor complexes reveals a mechanism of receptor inactivation in juvenile polyposis syndrome.
J.Biol.Chem., 283, 2008
4O4Y
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BU of 4o4y by Molmil
Crystal structure of the anti-hinge rabbit antibody 2095-2 in complex with IDES hinge peptide
Descriptor: 2095-2 heavy chain, 2095-2 light chain, GLYCEROL, ...
Authors:Malia, T.J, Teplyakov, A, Luo, J, Gilliland, G.L.
Deposit date:2013-12-19
Release date:2014-03-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and specificity of an antibody targeting a proteolytically cleaved IgG hinge.
Proteins, 82, 2014
2QO0
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BU of 2qo0 by Molmil
Crystal structure of the complex between the A246F mutant of mycobacterium beta-ketoacyl-acyl carrier protein synthase III (FABH) and 11-(decyldithiocarbonyloxy)-undecanoic acid
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase 3, DECANE-1-THIOL
Authors:Sachdeva, S, Musayev, F, Alhamadsheh, M, Scarsdale, J.N, Wright, H.T, Reynolds, K.A.
Deposit date:2007-07-19
Release date:2008-05-06
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Separate Entrance and Exit Portals for Ligand Traffic in Mycobacterium tuberculosis FabH
Chem.Biol., 15, 2008
4RV2
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BU of 4rv2 by Molmil
Crystal Structure of (3R)-hydroxyacyl-ACP dehydratase HadAB hetero-dimer from Mycobacterium smegmatis
Descriptor: MaoC family protein, SULFATE ION, UPF0336 protein MSMEG_1340/MSMEI_1302
Authors:Biswas, R, Hazra, D, Dutta, D, Das, A.K.
Deposit date:2014-11-24
Release date:2015-02-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of dehydratase component HadAB complex of mycobacterial FAS-II pathway.
Biochem.Biophys.Res.Commun., 458, 2015
4RVK
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BU of 4rvk by Molmil
CHK1 kinase domain with diazacarbazole compound 8: N-[3-(6-cyano-9H-pyrrolo[2,3-b:5,4-c']dipyridin-3-yl)phenyl]acetamide
Descriptor: N-[3-(6-cyano-9H-pyrrolo[2,3-b:5,4-c']dipyridin-3-yl)phenyl]acetamide, Serine/threonine-protein kinase Chk1
Authors:Wiesmann, C, Wu, P.
Deposit date:2014-11-26
Release date:2015-06-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Mitigation of Acetylcholine Esterase Activity in the 1,7-Diazacarbazole Series of Inhibitors of Checkpoint Kinase 1.
J.Med.Chem., 58, 2015
4LYS
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BU of 4lys by Molmil
Crystal Structure of BRD4(1) bound to Colchiceine
Descriptor: Bromodomain-containing protein 4, N-[(7S)-10-hydroxy-1,2,3-trimethoxy-9-oxo-5,6,7,9-tetrahydrobenzo[a]heptalen-7-yl]acetamide, SODIUM ION
Authors:Wohlwend, D, Gerhardt, S, Einsle, O.
Deposit date:2013-07-31
Release date:2014-01-15
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:4-Acyl pyrroles: mimicking acetylated lysines in histone code reading.
Angew.Chem.Int.Ed.Engl., 52, 2013
4M8Q
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BU of 4m8q by Molmil
Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10
Descriptor: 4E10 epitope scaffold T117, GEP1 Fv heavy chain, GEP1 Fv light chain
Authors:Finton, K.A.K.
Deposit date:2013-08-13
Release date:2014-10-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Ontogeny of Recognition Specificity and Functionality for the Broadly Neutralizing Anti-HIV Antibody 4E10.
Plos Pathog., 10, 2014
3KWG
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BU of 3kwg by Molmil
X-ray structure of NS1 effector domain W187A mutant
Descriptor: Non-structural protein 1
Authors:Xia, S, Robertus, J.D.
Deposit date:2009-12-01
Release date:2010-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:X-ray structures of NS1 effector domain mutants.
Arch.Biochem.Biophys., 494, 2010
3L35
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BU of 3l35 by Molmil
PIE12 D-peptide against HIV entry
Descriptor: GP41 N-PEPTIDE, HIV ENTRY INHIBITOR PIE12
Authors:Welch, B.D, Redman, J.S, Paul, S, Whitby, F.G, Weinstock, M.T, Reeves, J.D, Lie, Y.S, Eckert, D.M, Hill, C.P, Root, M.J, Kay, M.S.
Deposit date:2009-12-16
Release date:2010-11-03
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Design of a potent D-peptide HIV-1 entry inhibitor with a strong barrier to resistance.
J.Virol., 84, 2010

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