4PCZ
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![BU of 4pcz by Molmil](/molmil-images/mine/4pcz) | Crystal structure of a complex between R247G LlFPG mutant and a THF containing DNA | Descriptor: | DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), Formamidopyrimidine-DNA glycosylase, ... | Authors: | Coste, F, Castaing, B. | Deposit date: | 2014-04-17 | Release date: | 2015-04-01 | Last modified: | 2023-09-27 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Zinc finger oxidation of Fpg/Nei DNA glycosylases by 2-thioxanthine: biochemical and X-ray structural characterization. Nucleic Acids Res., 42, 2014
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6DBX
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![BU of 6dbx by Molmil](/molmil-images/mine/6dbx) | Cryo-EM structure of RAG in complex with 12-RSS substrate DNA | Descriptor: | CALCIUM ION, Forward strand of 12-RSS substrate DNA, Recombination activating gene 1 - MBP chimera, ... | Authors: | Wu, H, Liao, M, Ru, H, Mi, W. | Deposit date: | 2018-05-03 | Release date: | 2018-08-01 | Last modified: | 2024-03-13 | Method: | ELECTRON MICROSCOPY (4.2 Å) | Cite: | DNA melting initiates the RAG catalytic pathway. Nat. Struct. Mol. Biol., 25, 2018
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6W3Q
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![BU of 6w3q by Molmil](/molmil-images/mine/6w3q) | APE1 exonuclease substrate complex L104R | Descriptor: | CALCIUM ION, DNA-(apurinic or apyrimidinic site) lyase, GCTGATGCG(C7R), ... | Authors: | Freudenthal, B.D, Whitaker, A.M. | Deposit date: | 2020-03-09 | Release date: | 2020-06-10 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.49 Å) | Cite: | Molecular and structural characterization of disease-associated APE1 polymorphisms. DNA Repair (Amst.), 91-92, 2020
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4M9V
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![BU of 4m9v by Molmil](/molmil-images/mine/4m9v) | Zfp57 mutant (E182Q) in complex with 5-carboxylcytosine DNA | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CALCIUM ION, ... | Authors: | Liu, Y, Olanrewaju, Y.O, Zhang, X, Cheng, X. | Deposit date: | 2013-08-15 | Release date: | 2013-11-27 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (0.969 Å) | Cite: | DNA recognition of 5-carboxylcytosine by a zfp57 mutant at an atomic resolution of 0.97 angstrom. Biochemistry, 52, 2013
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8E4D
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![BU of 8e4d by Molmil](/molmil-images/mine/8e4d) | [U:Ag+:U] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice | Descriptor: | DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*UP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ... | Authors: | Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P. | Deposit date: | 2022-08-18 | Release date: | 2023-04-05 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (4.19 Å) | Cite: | Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction. Adv Mater, 35, 2023
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8E4E
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![BU of 8e4e by Molmil](/molmil-images/mine/8e4e) | [T:Ag+:T] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice | Descriptor: | DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*TP*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ... | Authors: | Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P. | Deposit date: | 2022-08-18 | Release date: | 2023-04-05 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (4.19 Å) | Cite: | Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction. Adv Mater, 35, 2023
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8HMW
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![BU of 8hmw by Molmil](/molmil-images/mine/8hmw) | |
7LWA
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![BU of 7lwa by Molmil](/molmil-images/mine/7lwa) | |
7LW9
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![BU of 7lw9 by Molmil](/molmil-images/mine/7lw9) | Human Exonuclease 5 crystal structure in complex with ssDNA, Sm, and Na | Descriptor: | 1,2-ETHANEDIOL, ACETATE ION, DNA (5'-D(*AP*TP*TP*GP*CP*TP*GP*AP*AP*GP*GP*G)-3'), ... | Authors: | Tsai, C.L, Tainer, J.A. | Deposit date: | 2021-02-28 | Release date: | 2021-07-14 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.71 Å) | Cite: | EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart. Mol.Cell, 81, 2021
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7LW8
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![BU of 7lw8 by Molmil](/molmil-images/mine/7lw8) | Human Exonuclease 5 crystal structure in complex with a ssDNA | Descriptor: | 1,2-ETHANEDIOL, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Exonuclease V, ... | Authors: | Tsai, C.L, Tainer, J.A. | Deposit date: | 2021-02-28 | Release date: | 2021-07-14 | Last modified: | 2023-10-18 | Method: | X-RAY DIFFRACTION (2.88 Å) | Cite: | EXO5-DNA structure and BLM interactions direct DNA resection critical for ATR-dependent replication restart. Mol.Cell, 81, 2021
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8EG4
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![BU of 8eg4 by Molmil](/molmil-images/mine/8eg4) | [iU:Ag+:iU] Metal-mediated DNA base pair in a self-assembling rhombohedral lattice | Descriptor: | DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*(5IU)P*TP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*AP*(5IU)P*AP*CP*A*(AG))-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ... | Authors: | Vecchioni, S, Lu, B, Seeman, N.C, Sha, R, Ohayon, Y.P. | Deposit date: | 2022-09-10 | Release date: | 2023-04-05 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (4.18 Å) | Cite: | Metal-Mediated DNA Nanotechnology in 3D: Structural Library by Templated Diffraction. Adv Mater, 35, 2023
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8DC2
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![BU of 8dc2 by Molmil](/molmil-images/mine/8dc2) | Cryo-EM structure of CasLambda (Cas12l) bound to crRNA and DNA | Descriptor: | CasLambda, DNA NTS, DNA TS, ... | Authors: | Al-Shayeb, B, Skopintsev, P, Soczek, K, Doudna, J. | Deposit date: | 2022-06-15 | Release date: | 2022-12-14 | Last modified: | 2024-06-12 | Method: | ELECTRON MICROSCOPY (2.99 Å) | Cite: | Diverse virus-encoded CRISPR-Cas systems include streamlined genome editors. Cell, 185, 2022
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4ZT0
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![BU of 4zt0 by Molmil](/molmil-images/mine/4zt0) | |
8W0A
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![BU of 8w0a by Molmil](/molmil-images/mine/8w0a) | |
1LAU
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![BU of 1lau by Molmil](/molmil-images/mine/1lau) | URACIL-DNA GLYCOSYLASE | Descriptor: | DNA (5'-D(*TP*TP*T)-3'), PROTEIN (URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-)) | Authors: | Pearl, L.H, Savva, R. | Deposit date: | 1996-01-03 | Release date: | 1996-06-10 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | The structural basis of specific base-excision repair by uracil-DNA glycosylase. Nature, 373, 1995
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4KAZ
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![BU of 4kaz by Molmil](/molmil-images/mine/4kaz) | Crystal structure of RNase T in complex with a Y structured DNA | Descriptor: | DNA (5'-D(*TP*TP*GP*GP*CP*CP*CP*TP*CP*TP*TP*TP*AP*GP*GP*GP*CP*CP*CP*C)-3'), MAGNESIUM ION, Ribonuclease T | Authors: | Hsiao, Y.-Y, Yuan, H.S. | Deposit date: | 2013-04-23 | Release date: | 2014-03-05 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural insights into DNA repair by RNase T--an exonuclease processing 3' end of structured DNA in repair pathways. Plos Biol., 12, 2014
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3MDA
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![BU of 3mda by Molmil](/molmil-images/mine/3mda) | DNA polymerase lambda in complex with araC | Descriptor: | DNA (5'-D(*CP*AP*GP*TP*AP*CP*(CAR))-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*TP*AP*CP*TP*G)-3'), DNA (5'-D(P*GP*CP*CP*G)-3'), ... | Authors: | Garcia-Diaz, M, Murray, M, Kunkel, T, Chou, K.M. | Deposit date: | 2010-03-30 | Release date: | 2010-04-28 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.031 Å) | Cite: | Interaction between DNA Polymerase lambda and anticancer nucleoside analogs. J.Biol.Chem., 285, 2010
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4KB0
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![BU of 4kb0 by Molmil](/molmil-images/mine/4kb0) | |
4ZT9
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![BU of 4zt9 by Molmil](/molmil-images/mine/4zt9) | |
5Z7D
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![BU of 5z7d by Molmil](/molmil-images/mine/5z7d) | p204HINab-dsDNA complex structure | Descriptor: | DNA (5'-D(P*CP*CP*AP*TP*CP*AP*GP*AP*AP*AP*GP*AP*GP*AP*GP*C)-3'), Interferon-activable protein 204 | Authors: | Jin, T, Jiang, J, Xiao, T.S. | Deposit date: | 2018-01-28 | Release date: | 2019-01-30 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (4.5 Å) | Cite: | Structural mechanism of DNA recognition by the p204 HIN domain. Nucleic Acids Res., 2021
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5YX2
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![BU of 5yx2 by Molmil](/molmil-images/mine/5yx2) | |
2PV0
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![BU of 2pv0 by Molmil](/molmil-images/mine/2pv0) | DNA methyltransferase 3 like protein (DNMT3L) | Descriptor: | DNA (cytosine-5)-methyltransferase 3-like, ZINC ION | Authors: | Cheng, X. | Deposit date: | 2007-05-09 | Release date: | 2007-08-14 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA. Nature, 448, 2007
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3O59
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![BU of 3o59 by Molmil](/molmil-images/mine/3o59) | |
6BRR
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![BU of 6brr by Molmil](/molmil-images/mine/6brr) | |
4LYL
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![BU of 4lyl by Molmil](/molmil-images/mine/4lyl) | Crystal structure of uracil-DNA glycosylase from cod (Gadus morhua) in complex with the proteinaceous inhibitor UGI | Descriptor: | Uracil-DNA glycosylase, Uracil-DNA glycosylase inhibitor | Authors: | Assefa, N.G, Niiranen, L.M.K, Johnson, K.A, Leiros, H.-K.S, Smalas, A.O, Willassen, N.P, Moe, E. | Deposit date: | 2013-07-31 | Release date: | 2014-08-13 | Method: | X-RAY DIFFRACTION (1.93 Å) | Cite: | Structural and biophysical analysis of interactions between cod and human uracil-DNA N-glycosylase (UNG) and UNG inhibitor (Ugi). Acta Crystallogr.,Sect.D, 70, 2014
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