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8WNI
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BU of 8wni by Molmil
Crystal structure of H. pylori isoleucyl-tRNA synthetase (HpIleRS) in complex with Val
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
Authors:Guo, Y, Li, S, Zhang, T.
Deposit date:2023-10-06
Release date:2024-02-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for substrate and antibiotic recognition by Helicobacter pylori isoleucyl-tRNA synthetase.
Febs Lett., 598, 2024
5N3J
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BU of 5n3j by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-Nitrobenzoic acid
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-NITROBENZOIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N3Q
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BU of 5n3q by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 3-Aminobenzamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 3-aminobenzamide, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N3H
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BU of 5n3h by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule pyridine-3-carboxamide
Descriptor: DIMETHYL SULFOXIDE, NICOTINAMIDE, cAMP-dependent protein kinase catalytic subunit alpha
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
5N3S
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BU of 5n3s by Molmil
cAMP-dependent Protein Kinase A from Cricetulus griseus in complex with fragment like molecule 4-Hydroxybenzamide
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-HYDROXYBENZAMIDE, DIMETHYL SULFOXIDE, ...
Authors:Siefker, C, Heine, A, Klebe, G.
Deposit date:2017-02-08
Release date:2018-02-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Fragment Binding to Kinase Hinge: If Charge Distribution and Local pK a Shifts Mislead Popular Bioisosterism Concepts.
Angew.Chem.Int.Ed.Engl., 2020
2P9V
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BU of 2p9v by Molmil
Structure of AmpC beta-lactamase with cross-linked active site after exposure to small molecule inhibitor
Descriptor: Beta-lactamase, PHOSPHATE ION
Authors:Babaoglu, K, Wyrembak, P.N, Pelto, R.B, Shoichet, B.K, Pratt, R.F.
Deposit date:2007-03-26
Release date:2007-08-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:O-Aryloxycarbonyl Hydroxamates: New beta-Lactamase Inhibitors That Cross-Link the Active Site.
J.Am.Chem.Soc., 129, 2007
4E3J
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BU of 4e3j by Molmil
Crystal structure of AmpC beta-lactamase in complex with a designed 4-tetrazolyl benzene sulfonamide boronic acid inhibitor
Descriptor: Beta-lactamase, PHOSPHATE ION, [({[4-(1H-tetrazol-5-yl)phenyl]sulfonyl}amino)methyl]boronic acid
Authors:Eidam, O, Shoichet, B.K.
Deposit date:2012-03-09
Release date:2012-09-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7999 Å)
Cite:Fragment-guided design of subnanomolar beta-lactamase inhibitors active in vivo.
Proc.Natl.Acad.Sci.USA, 109, 2012
1M5Z
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BU of 1m5z by Molmil
The PDZ7 of Glutamate Receptor Interacting Protein Binds to its Target via a Novel Hydrophobic Surface Area
Descriptor: AMPA receptor interacting protein
Authors:Feng, W, Fan, J, Jiang, M, Shi, Y, Zhang, M.
Deposit date:2002-07-11
Release date:2002-11-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The PDZ7 of Glutamate Receptor Interacting Protein Binds to its Target via a Novel Hydrophobic Surface Area
J.Biol.Chem., 277, 2002
7NP3
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BU of 7np3 by Molmil
cAMP-free rabbit HCN4 stabilized in LMNG-CHS detergent mixture
Descriptor: Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4,Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
Authors:Giese, H.M, Chaves-Sanjuan, A, Saponaro, A, Clarke, O, Bolognesi, M, Mancia, F, Hendrickson, W.A, Thiel, G, Santoro, B, Moroni, A.
Deposit date:2021-02-26
Release date:2021-08-11
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Gating movements and ion permeation in HCN4 pacemaker channels.
Mol.Cell, 81, 2021
2P98
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BU of 2p98 by Molmil
E. coli methionine aminopeptidase monometalated with inhibitor YE7
Descriptor: IMIDAZO[2,1-A]ISOQUINOLINE-2-CARBOHYDRAZIDE, MANGANESE (II) ION, Methionine aminopeptidase, ...
Authors:Ye, Q.
Deposit date:2007-03-24
Release date:2007-11-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Inhibition of Monometalated Methionine Aminopeptidase: Inhibitor Discovery and Crystallographic Analysis.
J.Med.Chem., 50, 2007
4X68
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BU of 4x68 by Molmil
Crystal Structure of OP0595 complexed with AmpC
Descriptor: (2S,5R)-N-(2-aminoethoxy)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, NICKEL (II) ION
Authors:Yamada, M, Watanabe, T.
Deposit date:2014-12-07
Release date:2015-07-01
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:OP0595, a new diazabicyclooctane: mode of action as a serine beta-lactamase inhibitor, antibiotic and beta-lactam 'enhancer'
J.Antimicrob.Chemother., 70, 2015
5C76
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BU of 5c76 by Molmil
ATP-driven lipid-linked oligosaccharide flippase PglK in apo-inward facing state (2)
Descriptor: WlaB protein
Authors:Perez, C, Gerber, S, Locher, K.P.
Deposit date:2015-06-24
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.94 Å)
Cite:Structure and mechanism of an active lipid-linked oligosaccharide flippase.
Nature, 524, 2015
6EJI
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BU of 6eji by Molmil
Structure of a glycosyltransferase
Descriptor: CHLORIDE ION, GLYCEROL, POTASSIUM ION, ...
Authors:Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P.
Deposit date:2017-09-21
Release date:2018-02-07
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase.
Nat Commun, 9, 2018
6EJK
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BU of 6ejk by Molmil
Structure of a glycosyltransferase
Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-glucopyranose, NerylNeryl pyrophosphate, Uridine-Diphosphate-Methylene-N-acetyl-galactosamine, ...
Authors:Ramirez, A.S, Boilevin, J, Mehdipour, A.R, Hummer, G, Darbre, T, Reymond, J.L, Locher, K.P.
Deposit date:2017-09-21
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of the molecular ruler mechanism of a bacterial glycosyltransferase.
Nat Commun, 9, 2018
7SAY
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BU of 7say by Molmil
Fragment of streptococcal M87 protein fused to GCN4 adaptor in complex with human cathelicidin
Descriptor: 1,2-ETHANEDIOL, Antibacterial peptide LL-37, General control transcription factor GCN4/M protein chimera
Authors:Kolesinski, P, Ghosh, P.
Deposit date:2021-09-23
Release date:2022-07-13
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:An M protein coiled coil unfurls and exposes its hydrophobic core to capture LL-37
Elife, 11, 2022
4W9M
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BU of 4w9m by Molmil
AMPPNP bound Rad50 in complex with dsDNA
Descriptor: DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*CP*AP*CP*CP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*GP*GP*TP*GP*AP*CP*CP*GP*AP*CP*C)-3'), Exonuclease, ...
Authors:Rojowska, A, Lammens, K.
Deposit date:2014-08-27
Release date:2015-01-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the Rad50 DNA double-strand break repair protein in complex with DNA.
Embo J., 33, 2014
5GXG
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BU of 5gxg by Molmil
High-resolution crystal structure of the electron transfer complex of cytochrome p450cam with putidaredoxin
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Camphor 5-monooxygenase, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Kikui, Y, Hiruma, Y, Ubbink, M, Nojiri, M.
Deposit date:2016-09-17
Release date:2017-01-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Identification of productive and futile encounters in an electron transfer protein complex
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2K6O
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BU of 2k6o by Molmil
Human LL-37 Structure
Descriptor: Cathelicidin antimicrobial peptide
Authors:Wang, G.
Deposit date:2008-07-14
Release date:2008-09-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structures of human host defense cathelicidin LL-37 and its smallest antimicrobial peptide KR-12 in lipid micelles
J.Biol.Chem., 283, 2008
2LQD
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BU of 2lqd by Molmil
Reduced and CO-bound cytochrome P450cam (CYP101A1)
Descriptor: CARBON MONOXIDE, Camphor 5-monooxygenase, POTASSIUM ION, ...
Authors:Pochapsky, T.C, Pochapsky, S.S, Asciutto, E, Madura, J, Young, M.J.
Deposit date:2012-03-02
Release date:2012-05-09
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structural Ensembles of Substrate-Free Cytochrome P450(cam).
Biochemistry, 51, 2012
5OWV
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BU of 5owv by Molmil
An oligomerised bacterial dynamin pair provides a mechanism for the long-range sensing and tethering of membranes
Descriptor: GTP-binding protein
Authors:Liu, J.W, Noel, J.K, Low, H.H.
Deposit date:2017-09-04
Release date:2018-09-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.72 Å)
Cite:Structural basis for membrane tethering by a bacterial dynamin-like pair.
Nat Commun, 9, 2018
6VXJ
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BU of 6vxj by Molmil
Structure of ABCG2 bound to SN38
Descriptor: 7-ethyl-10-hydroxycamptothecin, Broad substrate specificity ATP-binding cassette transporter ABCG2, CHOLESTEROL
Authors:Orlando, B.J, Liao, M.
Deposit date:2020-02-22
Release date:2020-05-13
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:ABCG2 transports anticancer drugs via a closed-to-open switch.
Nat Commun, 11, 2020
8CY8
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BU of 8cy8 by Molmil
apo form Cryo-EM structure of Campylobacter jejune ketol-acid reductoisommerase crosslinked by Glutaraldehyde
Descriptor: Ketol-acid reductoisomerase (NADP(+)), PENTANEDIAL
Authors:Zheng, S, Guddat, L.W.
Deposit date:2022-05-23
Release date:2023-02-01
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:Enhancing the Thermal and Kinetic Stability of Ketol-Acid Reductoisomerase, a Central Catalyst of a Cell-Free Enzyme Cascade for the Manufacture of Platform Chemicals
Appl Biosci, 2022
2LMF
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BU of 2lmf by Molmil
Solution structure of human LL-23 bound to membrane-mimetic micelles
Descriptor: Antibacterial protein LL-37
Authors:Wang, G.
Deposit date:2011-11-30
Release date:2011-12-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure, Dynamics, and Antimicrobial and Immune Modulatory Activities of Human LL-23 and Its Single-Residue Variants Mutated on the Basis of Homologous Primate Cathelicidins.
Biochemistry, 51, 2012
2J9A
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BU of 2j9a by Molmil
blLAP in Complex with Microginin FR1
Descriptor: (2S,3R)-3-AMINO-2-HYDROXYDECANOIC ACID, (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, ...
Authors:Kraft, M, Schleberger, C, Weckesser, J, Schulz, G.E.
Deposit date:2006-11-06
Release date:2006-12-06
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Binding Structure of the Leucine Aminopeptidase Inhibitor Microginin Fr1.
FEBS Lett., 580, 2006
5NMN
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BU of 5nmn by Molmil
Atomic resolution structure of LL-37 in a monomeric state
Descriptor: Cathelicidin antimicrobial peptide, SODIUM ION
Authors:Zeth, K, Sancho-Vaello, E.
Deposit date:2017-04-06
Release date:2018-01-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Structural remodeling and oligomerization of human cathelicidin on membranes suggest fibril-like structures as active species.
Sci Rep, 7, 2017

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