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4JGE
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BU of 4jge by Molmil
Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum)
Descriptor: GLYCEROL, Red fluorescent protein blFP-R5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2013-03-01
Release date:2013-09-18
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine.
Acta Crystallogr.,Sect.D, 69, 2013
4JLD
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BU of 4jld by Molmil
Crystal Structures of adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.552 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLA
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BU of 4jla by Molmil
Crystal Structure of Adenylate kinase with 2 ADP's in the active site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JKY
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BU of 4jky by Molmil
Cobalt between two ADP's in the active site of adenylate kinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, COBALT (II) ION
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLB
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BU of 4jlb by Molmil
Crystal Structures of Adenylate kinase with 2ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.528 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL5
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BU of 4jl5 by Molmil
A high resolution structure of Aquifex Adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL8
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BU of 4jl8 by Molmil
A various kinds of ADP conformations in the Adenylate kinase active site
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLP
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BU of 4jlp by Molmil
Crystal structure of R150K aquifex adenylate kinase mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Phung, L, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.433 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JLO
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BU of 4jlo by Molmil
Crystal structure of Aquifex adenylate kinase R150K mutant
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Phung, L, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JL6
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BU of 4jl6 by Molmil
Crystal Structure of Adenylate kinase with 2 ADP's
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Kern, D.
Deposit date:2013-03-12
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The energy landscape of adenylate kinase during catalysis.
Nat.Struct.Mol.Biol., 22, 2015
4JQ8
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BU of 4jq8 by Molmil
Crystal structure of EGFR kinase domain in complex with compound 4b
Descriptor: Epidermal growth factor receptor, N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]-N~3~,N~3~-dimethyl-beta-alaninamide
Authors:Peng, Y.H, Wu, J.S.
Deposit date:2013-03-20
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JQ7
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BU of 4jq7 by Molmil
Crystal structure of EGFR kinase domain in complex with compound 2a
Descriptor: (2S)-2-[(5,6-diphenylfuro[2,3-d]pyrimidin-4-yl)amino]-2-phenylethanol, Epidermal growth factor receptor
Authors:Peng, Y.H, Wu, J.S.
Deposit date:2013-03-20
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JR3
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BU of 4jr3 by Molmil
Crystal structure of EGFR kinase domain in complex with compound 3g
Descriptor: Epidermal growth factor receptor, N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]acetamide
Authors:Peng, Y.H, Wu, J.S.
Deposit date:2013-03-21
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JRB
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BU of 4jrb by Molmil
Structure of Cockroach Allergen Bla g 1 Tandem Repeat as a EGFP fusion
Descriptor: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, CHLORIDE ION, DODECANE, ...
Authors:Mueller, G.A, Pedersen, L.C, Lih, F.B, Glesner, J, Moon, A.F, Chapman, M.D, Tomer, K, London, R.E.
Deposit date:2013-03-21
Release date:2013-07-24
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.414 Å)
Cite:The novel structure of the cockroach allergen Bla g 1 has implications for allergenicity and exposure assessment.
J.Allergy Clin.Immunol., 132, 2013
4JRV
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BU of 4jrv by Molmil
Crystal structure of EGFR kinase domain in complex with compound 4c
Descriptor: 4-(dimethylamino)-N-[3-(4-{[(1S)-2-hydroxy-1-phenylethyl]amino}-6-phenylfuro[2,3-d]pyrimidin-5-yl)phenyl]butanamide, Epidermal growth factor receptor
Authors:Peng, Y.H, Wu, J.S.
Deposit date:2013-03-22
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Protein Kinase Inhibitor Design by Targeting the Asp-Phe-Gly (DFG) Motif: The Role of the DFG Motif in the Design of Epidermal Growth Factor Receptor Inhibitors
J.Med.Chem., 56, 2013
4JZK
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BU of 4jzk by Molmil
Crystal Structure of Adenylate kinase of E. Coli with ADP/AMP bound
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Cho, Y.-J, Agafonov, R, Kern, D.
Deposit date:2013-04-03
Release date:2014-04-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of E. Coli Adenylate kinase with ADP and AMP bound
To be Published
4K46
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BU of 4k46 by Molmil
Crystal Structure of Adenylate Kinase from Photobacterium profundum
Descriptor: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, ...
Authors:Cho, Y.-J, Kerns, S.J, Kern, D.
Deposit date:2013-04-12
Release date:2014-07-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Alike but Different: Adenylate kinases from E. Coli, Aquifex, and P. profundum
To be Published
4KAG
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BU of 4kag by Molmil
Crystal structure analysis of a single amino acid deletion mutation in EGFP
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
Authors:Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2013-04-22
Release date:2014-08-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.
Acta Crystallogr.,Sect.D, 70, 2014
4KA9
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BU of 4ka9 by Molmil
Crystal structure analysis of single amino acid deletion mutations in EGFP
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Green fluorescent protein, ...
Authors:Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2013-04-22
Release date:2014-05-07
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Random single amino acid deletion sampling unveils structural tolerance and the benefits of helical registry shift on GFP folding and structure.
Structure, 22, 2014
4KF5
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BU of 4kf5 by Molmil
Crystal Structure of Split GFP complexed with engineered sfCherry with an insertion of GFP fragment
Descriptor: fluorescent protein GFP1-9, fluorescent protein sfCherry+GFP10-11
Authors:Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C.
Deposit date:2013-04-26
Release date:2013-12-18
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Split green fluorescent protein as a modular binding partner for protein crystallization.
Acta Crystallogr.,Sect.D, 69, 2013
4KEX
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BU of 4kex by Molmil
Crystal structure analysis of a single amino acid deletion mutation in EGFP
Descriptor: Green fluorescent protein
Authors:Arpino, J.A.J, Rizkallah, P.J.
Deposit date:2013-04-26
Release date:2014-08-06
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.
Acta Crystallogr.,Sect.D, 70, 2014
4KF4
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BU of 4kf4 by Molmil
Crystal Structure of sfCherry
Descriptor: fluorescent protein sfCherry
Authors:Nguyen, H.B, Hung, L.-W, Yeates, T.O, Waldo, G.S, Terwilliger, T.C.
Deposit date:2013-04-26
Release date:2013-12-18
Method:X-RAY DIFFRACTION (1.994 Å)
Cite:Split green fluorescent protein as a modular binding partner for protein crystallization.
Acta Crystallogr.,Sect.D, 69, 2013
4KGF
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BU of 4kgf by Molmil
Crystal structure of near-infrared fluorescent protein with an extended stokes shift, ph 8.0
Descriptor: CHLORIDE ION, TagRFP675, red fluorescent protein
Authors:Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-29
Release date:2013-05-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant.
Sci Rep, 3, 2013
4KGE
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BU of 4kge by Molmil
Crystal structure of near-infrared fluorescent protein with an extended stokes shift, pH 4.5
Descriptor: CHLORIDE ION, TagRFP675, red fluorescent protein
Authors:Malashkevich, V.N, Piatkevich, K, Almo, S.C, Verkhusha, V, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2013-04-29
Release date:2013-05-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Extended Stokes shift in fluorescent proteins: chromophore-protein interactions in a near-infrared TagRFP675 variant.
Sci Rep, 3, 2013
4KK2
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BU of 4kk2 by Molmil
Crystal structure of a chimeric FPP/GFPP synthase (TARGET EFI-502313c) from Artemisia spiciformiS (1-72:GI751454468,73-346:GI75233326), apo structure
Descriptor: Monoterpene synthase FDS-5, chloroplastic - Farnesyl diphosphate synthase 1 chimera
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Poulter, C.D, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-05-05
Release date:2013-06-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a chimeric FPP/GFPP synthase (TARGET EFI-502313c) from Artemisia spiciformis (1-72:GI751454468,73-346:GI75233326), apo structure
To be Published

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PDB entries from 2024-06-26

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