Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6RFE
DownloadVisualize
BU of 6rfe by Molmil
Human protein kinase CK2 alpha in complex with 2-cyano-2-propenamide compound 4
Descriptor: (~{E})-~{N}-(5-bromanyl-1,3,4-thiadiazol-2-yl)-2-cyano-3-(3-methoxy-4-oxidanyl-phenyl)prop-2-enamide, 1,2-ETHANEDIOL, Casein kinase II subunit alpha, ...
Authors:Dalle Vedove, A, Zanforlin, E, Ribaudo, G, Zagotto, G, Battistutta, R, Lolli, G.
Deposit date:2019-04-13
Release date:2020-04-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:A novel class of selective CK2 inhibitors targeting its open hinge conformation.
Eur.J.Med.Chem., 195, 2020
7QR9
DownloadVisualize
BU of 7qr9 by Molmil
Crystal structure of CK1 delta in complex with PK-09-82
Descriptor: 1,2-ETHANEDIOL, 4-[5-(4-fluorophenyl)-3-(pyridin-4-ylmethyl)imidazol-4-yl]-1~{H}-pyrrolo[2,3-b]pyridine, Casein kinase I isoform delta, ...
Authors:Chaikuad, A, Khirsariya, P, Paruch, K, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-10
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of Potent and Exquisitely Selective Inhibitors of Kinase CK1 with Tunable Isoform Selectivity.
Angew.Chem.Int.Ed.Engl., 62, 2023
7QRB
DownloadVisualize
BU of 7qrb by Molmil
Crystal structure of CK1 delta in complex with PK-09-129
Descriptor: 3-(dimethylamino)-~{N}-[4-[4-(4-fluorophenyl)-5-(1~{H}-pyrrolo[2,3-b]pyridin-4-yl)imidazol-1-yl]cyclohexyl]propane-1-sulfonamide, Casein kinase I isoform delta, SULFATE ION
Authors:Chaikuad, A, Khirsariya, P, Paruch, K, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2022-01-10
Release date:2023-01-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Discovery of Potent and Exquisitely Selective Inhibitors of Kinase CK1 with Tunable Isoform Selectivity.
Angew.Chem.Int.Ed.Engl., 62, 2023
4OBG
DownloadVisualize
BU of 4obg by Molmil
Crystal Structure of Nelfinavir-Resistant, Inactive HIV-1 Protease (D30N/N88D) in Complex with the p1-p6 substrate.
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, HIV-1 Protease, ...
Authors:Kolli, M.
Deposit date:2014-01-07
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:HIV-1 protease-substrate coevolution in nelfinavir resistance.
J.Virol., 88, 2014
7QWH
DownloadVisualize
BU of 7qwh by Molmil
X-ray structure of the adduct formed upon reaction of a vanadium hydroxyquinoline complex with RNase A
Descriptor: 2,2-bis($l^{1}-oxidanyl)-3-oxa-1$l^{4}-aza-2$l^{4}-vanadatricyclo[6.3.1.0^{4,12}]dodeca-1(12),4,6,8,10-pentaene, Ribonuclease pancreatic
Authors:Merlino, A, Ferraro, G.
Deposit date:2022-01-25
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.573 Å)
Cite:Interaction of VIVO-8-hydroxyquinoline species with RNase A: the effect of metal ligands in the protein adduct stabilization
Inorg Chem Front, 2023
4XO0
DownloadVisualize
BU of 4xo0 by Molmil
Crystal structure of 5'-CTTATPPTAZZATAAG in a host-guest complex
Descriptor: DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*T)-3'), DNA (5'-D(P*AP*(1W5)P*(1W5)P*AP*TP*AP*AP*G)-3'), reverse transcriptase
Authors:Georgiadis, M.M, Singh, I.
Deposit date:2015-01-16
Release date:2015-05-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for a six nucleotide genetic alphabet.
J. Am. Chem. Soc., 137, 2015
4OBP
DownloadVisualize
BU of 4obp by Molmil
MAP4K4 in complex with inhibitor (compound 29), 6-(2-FLUOROPYRIDIN-4-YL)PYRIDO[3,2-D]PYRIMIDIN-4-AMINE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 6-(2-fluoropyridin-4-yl)pyrido[3,2-d]pyrimidin-4-amine, MAGNESIUM ION, ...
Authors:Harris, S.F, Wu, P.
Deposit date:2014-01-07
Release date:2014-04-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Discovery of Selective 4-Amino-pyridopyrimidine Inhibitors of MAP4K4 Using Fragment-Based Lead Identification and Optimization.
J.Med.Chem., 57, 2014
4ODD
DownloadVisualize
BU of 4odd by Molmil
Crystal structure of a dog lipocalin allergen
Descriptor: LIPOCALIN ALLERGEN
Authors:Niemi, M.H, Rouvinen, J.
Deposit date:2014-01-10
Release date:2014-06-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural aspects of dog allergies: The crystal structure of a dog dander allergen Can f 4.
Mol.Immunol., 61, 2014
4XLT
DownloadVisualize
BU of 4xlt by Molmil
Crystal structure of response regulator receiver protein from Dyadobacter fermentans DSM 18053
Descriptor: Response regulator receiver protein
Authors:Chang, C, Cuff, M, Holowicki, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-01-13
Release date:2015-01-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of response regulator receiver protein from Dyadobacter fermentans DSM 18053
To Be Published
4ODC
DownloadVisualize
BU of 4odc by Molmil
Crystal structure of Trematomus bernacchii hemoglobin in a partially cyanided state
Descriptor: CYANIDE ION, GLYCEROL, Hemoglobin subunit alpha, ...
Authors:Mazzarella, L, Merlino, A, Vitagliano, L, Vergara, A.
Deposit date:2014-01-10
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structural modifications induced by the switch from an endogenous bis-histidyl to an exogenous cyanomet hexa-coordination in a tetrameric haemoglobin
RSC ADV, 4, 2014
6E04
DownloadVisualize
BU of 6e04 by Molmil
sperm whale myoglobin 1-nitrosopropane
Descriptor: 1-nitrosopropane, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Herrera, V.E.
Deposit date:2018-07-06
Release date:2019-07-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Insights into Nitrosoalkane Binding to Myoglobin Provided by Crystallography of Wild-Type and Distal Pocket Mutant Derivatives.
Biochemistry, 62, 2023
4XN6
DownloadVisualize
BU of 4xn6 by Molmil
Crystal structure at room temperature of hen-egg lysozyme in complex with benzamidine
Descriptor: BENZAMIDINE, Lysozyme C
Authors:Gelin, M, Allemand, F, Labesse, G, Guichou, J.F.
Deposit date:2015-01-15
Release date:2015-08-12
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Combining `dry' co-crystallization and in situ diffraction to facilitate ligand screening by X-ray crystallography.
Acta Crystallogr.,Sect.D, 71, 2015
7QWN
DownloadVisualize
BU of 7qwn by Molmil
Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor
Descriptor: CHLORIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Snee, M, Katariya, M, Levy, C, Leys, D.
Deposit date:2022-01-25
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structure Based Discovery of Inhibitors of CYP125 and CYP142 from Mycobacterium tuberculosis.
Chemistry, 29, 2023
6RQ3
DownloadVisualize
BU of 6rq3 by Molmil
CYP121 in complex with 2,6-dimethyl dicyclotyrosine
Descriptor: (3~{S},6~{S})-3-[(2,6-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Mycocyclosin synthase, ...
Authors:Poddar, H, Levy, C.
Deposit date:2019-05-15
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Activity Relationships of cyclo (l-Tyrosyl-l-tyrosine) Derivatives Binding to Mycobacterium tuberculosis CYP121: Iodinated Analogues Promote Shift to High-Spin Adduct.
J.Med.Chem., 62, 2019
6RU8
DownloadVisualize
BU of 6ru8 by Molmil
Crystal structure of Casein Kinase I delta (CK1d) in complex with triple phosphorylated p63 PAD3P peptide
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Casein kinase I isoform delta, ...
Authors:Chaikuad, A, Tuppi, M, Gebel, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Dotsch, V, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-05-27
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:p63 uses a switch-like mechanism to set the threshold for induction of apoptosis.
Nat.Chem.Biol., 16, 2020
8THO
DownloadVisualize
BU of 8tho by Molmil
Solution structure of the zinc finger repeat domain of BCL11A (ZnF456)
Descriptor: B-cell lymphoma/leukemia 11A, ZINC ION
Authors:Viennet, T, Yin, M, Orkin, S.H, Arthanari, H.
Deposit date:2023-07-17
Release date:2024-07-24
Method:SOLUTION NMR
Cite:Structural and dynamic investigation of DNA-binding by BCL11A reveals a specific role for ZnF6
To Be Published
6S02
DownloadVisualize
BU of 6s02 by Molmil
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain - ADP bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Heat shock protein 70, MAGNESIUM ION
Authors:Vakonakis, I, Day, J.
Deposit date:2019-06-13
Release date:2019-10-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:ThePlasmodium falciparumHsp70-x chaperone assists the heat stress response of the malaria parasite.
Faseb J., 33, 2019
8TGT
DownloadVisualize
BU of 8tgt by Molmil
Structure of human C4b-binding protein alpha chain CCP domains 1 and 2 in complex with the hypervariable region of group A Streptococcus M68 protein
Descriptor: 1,2-ETHANEDIOL, C4b-binding protein alpha chain, CALCIUM ION, ...
Authors:Kolesinski, P, Ghosh, P.
Deposit date:2023-07-13
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of human C4b-binding protein alpha chain CCP domains 1 and 2 in complex with the hypervariable region of group A Streptococcus M68 protein
To Be Published
4ORW
DownloadVisualize
BU of 4orw by Molmil
Three-dimensional structure of the C65A-K59A double mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.664 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4OS8
DownloadVisualize
BU of 4os8 by Molmil
Three-dimensional structure of the C65A-W54F-W112F triple mutant of Human lipocalin-type Prostaglandin D Synthase apo-form
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Perduca, M, Bovi, M, Bertinelli, M, Bertini, E, Destefanis, L, Carrizo, M.E, Capaldi, S, Monaco, H.L.
Deposit date:2014-02-12
Release date:2014-08-06
Last modified:2020-02-26
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:High-resolution structures of mutants of residues that affect access to the ligand-binding cavity of human lipocalin-type prostaglandin D synthase.
Acta Crystallogr.,Sect.D, 70, 2014
4XW5
DownloadVisualize
BU of 4xw5 by Molmil
X-ray structure of PKAc with ATP, CP20, calcium ions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Gerlits, O, Tian, J, Das, A, Taylor, S, Langan, P, Heller, T.W, Kovalevsky, A.
Deposit date:2015-01-28
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphoryl Transfer Reaction Snapshots in Crystals: INSIGHTS INTO THE MECHANISM OF PROTEIN KINASE A CATALYTIC SUBUNIT.
J.Biol.Chem., 290, 2015
6RYD
DownloadVisualize
BU of 6ryd by Molmil
WUS-HD bound to TGAA DNA
Descriptor: DNA (5'-D(*AP*GP*TP*GP*TP*AP*TP*GP*AP*AP*TP*GP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*CP*AP*TP*TP*CP*AP*TP*AP*CP*AP*CP*T)-3'), MAGNESIUM ION, ...
Authors:Sloan, J.J, Wild, K, Sinning, I.
Deposit date:2019-06-10
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.575 Å)
Cite:Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL.
Nat Commun, 11, 2020
6RYL
DownloadVisualize
BU of 6ryl by Molmil
WUS-HD bound to TAAT DNA
Descriptor: DNA (5'-D(P*CP*AP*CP*AP*AP*CP*CP*CP*AP*TP*TP*AP*AP*CP*AP*C)-3'), DNA (5'-D(P*GP*TP*GP*TP*TP*AP*AP*TP*GP*GP*GP*TP*TP*GP*TP*G)-3'), Protein WUSCHEL
Authors:Sloan, J.J, Wild, K, Sinning, I.
Deposit date:2019-06-10
Release date:2020-04-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Structural basis for the complex DNA binding behavior of the plant stem cell regulator WUSCHEL.
Nat Commun, 11, 2020
4OIK
DownloadVisualize
BU of 4oik by Molmil
(Quasi-)Racemic X-ray crystal structure of glycosylated chemokine Ser-CCL1.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, C-C motif chemokine 1, CITRIC ACID, ...
Authors:Okamoto, R, Mandal, K, Sawaya, M.R, Kajihara, Y, Yeates, T.O, Kent, S.B.H.
Deposit date:2014-01-19
Release date:2014-05-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:(Quasi-)Racemic X-ray Structures of Glycosylated and Non-Glycosylated Forms of the Chemokine Ser-CCL1 Prepared by Total Chemical Synthesis.
Angew.Chem.Int.Ed.Engl., 53, 2014
6E5E
DownloadVisualize
BU of 6e5e by Molmil
Crystal structure of the apo domain-swapped dimer Q108K:T51D mutant of human cellular retinol binding protein II
Descriptor: ACETATE ION, Retinol-binding protein 2
Authors:Ghanbarpour, A, Geiger, J.
Deposit date:2018-07-20
Release date:2019-10-16
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Engineering the hCRBPII Domain-Swapped Dimer into a New Class of Protein Switches.
J.Am.Chem.Soc., 141, 2019

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon