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9ENC
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BU of 9enc by Molmil
Human pseudouridine synthase 3 (PUS3 R116A mutant) and one tRNA-Gln
Descriptor: tRNA pseudouridine(38/39) synthase, tRNA-Gln
Authors:Lin, T.-Y, Jezowski, J, Glatt, S.
Deposit date:2024-03-12
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
9ENB
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BU of 9enb by Molmil
Human pseudouridine synthase 3 (PUS3 R116A mutant) and two tRNA-Gln
Descriptor: MAGNESIUM ION, tRNA pseudouridine(38/39) synthase, tRNA-Gln
Authors:Lin, T.-Y, Jezowski, J, Glatt, S.
Deposit date:2024-03-12
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
9EN6
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BU of 9en6 by Molmil
Crystal structure of RNA G2C4 repeats - native model pH 6.5
Descriptor: MAGNESIUM ION, RNA (5'-R(*GP*GP*CP*CP*CP*C)-3')
Authors:Mateja-Pluta, M, Kiliszek, A.
Deposit date:2024-03-12
Release date:2024-05-01
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (0.918 Å)
Cite:Antisense RNA C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms a triplex-like structure and binds small synthetic ligand.
Nucleic Acids Res., 52, 2024
9EN2
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BU of 9en2 by Molmil
Crystal structure of the metalloproteinase enhancer PCPE-1 complexed with nanobodies VHH-H4 and VHH-I5
Descriptor: CALCIUM ION, GLYCEROL, Procollagen C-endopeptidase enhancer 1, ...
Authors:Lagoutte, P, Gueguen-Chaignon, V, Bourhis, J.-M, Vadon-Le Goff, S.
Deposit date:2024-03-12
Release date:2024-07-03
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mono- and Bi-specific Nanobodies Targeting the CUB Domains of PCPE-1 Reduce the Proteolytic Processing of Fibrillar Procollagens.
J.Mol.Biol., 436, 2024
9EMV
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BU of 9emv by Molmil
SARS-CoV-2 nsp10-16 methyltransferase in complex with Sangivamycin and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Kremling, V, Sprenger, J, Oberthuer, D, Scheer, T.E.S.
Deposit date:2024-03-11
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:SARS-CoV-2 methyltransferase nsp10-16 in complex with natural and drug-like purine analogs for guiding structure-based drug development
To Be Published
9EMU
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BU of 9emu by Molmil
RosC-8-demethyl-8-amino-FMN - Phosphate complex
Descriptor: 1-deoxy-1-[8-(dimethylamino)-7-methyl-2,4-dioxo-3,4-dihydrobenzo[g]pteridin-10(2H)-yl]-D-ribitol, GLYCEROL, PHOSPHATE ION, ...
Authors:Ermler, U, Mack, M, Demmer, U.
Deposit date:2024-03-11
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Phosphatase RosC from Streptomyces davaonensis is Used for Roseoflavin Biosynthesis and has Evolved to Largely Prevent Dephosphorylation of the Important Cofactor Riboflavin-5'-phosphate.
J.Mol.Biol., 436, 2024
9EML
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BU of 9eml by Molmil
SARS-CoV-2 methyltransferase nsp10-16 in complex with SAM and m7GpppA (Cap0-analog)/m7GpppAm (Cap1-analog)
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase nsp16, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Kremling, V, Sprenger, J, Oberthuer, D, Kiene, A.
Deposit date:2024-03-08
Release date:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:SARS-CoV-2 methyltransferase nsp10-16 in complex with natural and drug-like purine analogs for guiding structure-based drug development
To Be Published
9EMJ
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BU of 9emj by Molmil
SARS-CoV-2 methyltransferase nsp10-16 in complex with Toyocamycin and m7GpppA (Cap0-analog)
Descriptor: 1,2-ETHANEDIOL, 2'-O-methyltransferase nsp16, 4-amino-7-(beta-D-ribofuranosyl)-7H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile, ...
Authors:Kremling, V, Sprenger, J, Oberthuer, D, Kiene, A.
Deposit date:2024-03-08
Release date:2024-03-20
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:SARS-CoV-2 methyltransferase nsp10-16 in complex with natural and drug-like purine analogs for guiding structure-based drug development
To Be Published
9EME
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BU of 9eme by Molmil
AL amyloid fibril from the FOR103 light chain
Descriptor: lambda 3 immunoglobulin light chain fragment, residues 2-116
Authors:Pfeiffer, P.B, Karimi-Farsijani, S, Kupfer, N, Schmidt, M, Faendrich, M.
Deposit date:2024-03-08
Release date:2024-06-26
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Light chain mutations contribute to defining the fibril morphology in systemic AL amyloidosis.
Nat Commun, 15, 2024
9EMC
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BU of 9emc by Molmil
RUVBL1/2 in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RuvB-like 1, ...
Authors:Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
Deposit date:2024-03-11
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
9EMB
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BU of 9emb by Molmil
Structure of KefC Asp156Asn variant
Descriptor: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ADENOSINE MONOPHOSPHATE, Glutathione-regulated potassium-efflux system protein KefC
Authors:Gulati, A, Kokane, S, Drew, D.
Deposit date:2024-03-07
Release date:2024-06-05
Method:ELECTRON MICROSCOPY (2.98 Å)
Cite:Structure of KefC Asp156Asn variant
To Be Published
9EMA
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BU of 9ema by Molmil
RUVBL1/2 in complex with ATP and CB-6644 inhibitor
Descriptor: 5-chloranyl-2-ethoxy-4-fluoranyl-~{N}-[4-[[3-(methoxymethyl)-1-oxidanylidene-6,7-dihydro-5~{H}-pyrazolo[1,2-a][1,2]benzodiazepin-2-yl]amino]-2,2-dimethyl-4-oxidanylidene-butyl]benzamide, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lopez-Perrote, A, Llorca, O, Garcia-Martin, C.
Deposit date:2024-03-07
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:Mechanism of allosteric inhibition of RUVBL1-RUVBL2 by the small-molecule CB-6644
Cell Rep Phys Sci, 2024
9EM9
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BU of 9em9 by Molmil
Structure of SynDLP MGD with GMPPNP
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Slr0869 protein
Authors:Junglas, B, Gewehr, L, Schoennenbeck, P, Schneider, D, Sachse, C.
Deposit date:2024-03-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for GTPase activity and conformational changes of the bacterial dynamin-like protein SynDLP.
Cell Rep, 43, 2024
9EM8
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BU of 9em8 by Molmil
Oligomeric structure of SynDLP in presence of GDP
Descriptor: Slr0869 protein
Authors:Junglas, B, Gewehr, L, Schoennenbeck, P, Schneider, D, Sachse, C.
Deposit date:2024-03-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural basis for GTPase activity and conformational changes of the bacterial dynamin-like protein SynDLP.
Cell Rep, 43, 2024
9EM7
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BU of 9em7 by Molmil
Oligomeric structure of SynDLP in presence of GTP
Descriptor: Slr0869 protein
Authors:Junglas, B, Gewehr, L, Schoennenbeck, P, Schneider, D, Sachse, C.
Deposit date:2024-03-07
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis for GTPase activity and conformational changes of the bacterial dynamin-like protein SynDLP.
Cell Rep, 43, 2024
9EM6
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BU of 9em6 by Molmil
OPR3 variant Y364P in its dimeric form obtained without ammonium sulfate
Descriptor: 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EM5
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BU of 9em5 by Molmil
OPR3 variant Y364P in its monomeric form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 12-oxophytodienoate reductase 3, CHLORIDE ION, ...
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EM4
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BU of 9em4 by Molmil
OPR3 variant Y364P in its dimeric form obtained with ammonium sulfate
Descriptor: 12-oxophytodienoate reductase 3, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FLAVIN MONONUCLEOTIDE, ...
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EM3
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BU of 9em3 by Molmil
OPR3 wild type in its monomeric form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EM2
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BU of 9em2 by Molmil
OPR3 wild type in its dimeric form obtained without sulfate
Descriptor: 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE, L(+)-TARTARIC ACID
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9EM1
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BU of 9em1 by Molmil
Human pyridoxal phosphatase in complex with 7,8-dihydroxyflavone and phosphate
Descriptor: 7,8-bis(oxidanyl)-2-phenyl-chromen-4-one, Chronophin, GLYCEROL, ...
Authors:Brenner, M, Gohla, A, Schindelin, H.
Deposit date:2024-03-07
Release date:2024-06-12
Last modified:2024-06-26
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase.
Elife, 13, 2024
9EM0
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BU of 9em0 by Molmil
OPR3 wild type in its dimeric form with special L6 conformation
Descriptor: 12-oxophytodienoate reductase 3, FLAVIN MONONUCLEOTIDE, PENTAETHYLENE GLYCOL
Authors:Bijelic, A, Macheroux, P, Kerschbaumer, B.
Deposit date:2024-03-07
Release date:2024-08-14
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Analysis of homodimer formation in 12-oxophytodienoate reductase 3 in solutio and crystallo challenges the physiological role of the dimer.
Sci Rep, 14, 2024
9DNA
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BU of 9dna by Molmil
CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC)
Descriptor: DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3')
Authors:Heinemann, U.
Deposit date:1987-07-10
Release date:1988-01-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC).
Nucleic Acids Res., 15, 1987
9DE2
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BU of 9de2 by Molmil
ETO2 MYND bound to MPPL peptide from GATAD2A
Descriptor: GATAD2A-MPPL motif and ETO2 NHR4 domain fusion protein, ZINC ION
Authors:Williams, D.C.
Deposit date:2024-08-28
Release date:2024-09-18
Method:SOLUTION NMR
Cite:The role of multivalency in the association of the eight twenty-one protein 2 (ETO2) with the nucleosome remodeling and deacetylase (NuRD) complex
To Be Published
9DDY
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BU of 9ddy by Molmil
The Crystal Structure of Geranyltranstransferase from Streptococcus pneumoniae TIGR4
Descriptor: GLYCEROL, Geranyltranstransferase
Authors:Kim, Y, Tan, A, Endres, M, Tan, K, Joachimik, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-08-28
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:The Crystal Structure of Geranyltranstransferase from Streptococcus pneumoniae TIGR4
To Be Published

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PDB entries from 2024-09-18

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