PDB: 909 resultsInfo pagesStatus searchChemie searchBIRD

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3JCT	Cryo-em structure of eukaryotic pre-60S ribosomal subunits Descriptor: 60S ribosomal protein L11-A, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, ... Authors: Wu, S, Kumcuoglu, B, Yan, K.G, Brown, H, Zhang, Y.X, Tan, D, Gamalinda, M, Yuan, Y, Li, Z.F, Jakovljevic, J, Ma, C.Y, Lei, J.L, Dong, M.Q, Woolford Jr, J.L, Gao, N. Deposit date: 2016-03-09 Release date: 2016-06-01 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes Nature, 534, 2016
5FJ4	Structure of the standard kink turn HmKt-7 as stem loop bound with U1A and L7Ae proteins Descriptor: 50S RIBOSOMAL PROTEIN L7AE, HMKT-7, U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A Authors: Huang, L, Lilley, D.M.J. Deposit date: 2015-10-06 Release date: 2016-05-25 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.95 Å) Cite: A Critical Base Pair in K-Turns Determines the Conformational Class Adopted, and Correlates with Biological Function. Nucleic Acids Res., 44, 2016
5IQQ	Crystal structure of the human RBM7 RRM domain Descriptor: RNA-binding protein 7 Authors: Sofos, N, Winkler, M.B.L, Brodersen, D.E. Deposit date: 2016-03-11 Release date: 2016-05-04 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.52 Å) Cite: RRM domain of human RBM7: purification, crystallization and structure determination. Acta Crystallogr.,Sect.F, 72, 2016
2N82	solution structure of the complex of microRNA 20b pre-element with Rbfox RRM Descriptor: RNA (5'-R(*GP*GP*UP*AP*GP*UP*UP*UP*UP*GP*GP*CP*AP*UP*GP*AP*CP*UP*CP*UP*AP*CP*C)-3'), RNA binding protein fox-1 homolog 1 Authors: Yang, F, Chen, Y, Varani, G. Deposit date: 2015-09-30 Release date: 2016-04-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Rbfox proteins regulate microRNA biogenesis by sequence-specific binding to their precursors and target downstream Dicer. Nucleic Acids Res., 44, 2016
5EV1	Structure I of Intact U2AF65 Recognizing a 3' Splice Site Signal Descriptor: DI(HYDROXYETHYL)ETHER, DNA/RNA (5'-R(*UP*UP*U)-D(P*UP*UP*(BRU)P*U)-R(P*UP*U)-3'), SODIUM ION, ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.037 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV2	Structure II of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: 1,4-DIETHYLENE DIOXIDE, DI(HYDROXYETHYL)ETHER, DNA (5'-R(P*UP*U)-D(P*UP*U)-R(P*U)-D(P*UP*(BRU)P*U)-3'), ... Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.86 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV3	Structure III of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*U)-D(P*U)-R(P*UP*U)-D(P*(BRU)P*UP*U)-3'), Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.5 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
5EV4	Structure IV of Intact U2AF65 Recognizing the 3' Splice Site Signal Descriptor: DNA/RNA (5'-R(P*UP*UP*UP*(UD)P*UP*U)-D(P*(BRU)P*(UD))-R(P*C)-3'), GLYCEROL, Splicing factor U2AF 65 kDa subunit Authors: Agrawal, A.A, Jenkins, J.L, Kielkopf, C.L. Deposit date: 2015-11-19 Release date: 2016-02-24 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (1.57 Å) Cite: An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal. Nat Commun, 7, 2016
4Y00	Crystal Structure of Human TDP-43 RRM1 Domain with D169G Mutation in Complex with an Unmodified Single-stranded DNA Descriptor: DNA (5'-D(P*TP*TP*GP*AP*GP*CP*GP*T)-3'), TAR DNA-binding protein 43 Authors: Chiang, C.H, Kuo, P.H, Yang, W.Z, Yuan, H.S. Deposit date: 2015-02-05 Release date: 2016-02-10 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation Sci Rep, 6, 2016
4Y0F	Crystal Structure of Human TDP-43 RRM1 Domain in Complex with an Unmodified Single-stranded DNA Descriptor: DNA (5'-D(*GP*TP*TP*GP*AP*GP*CP*GP*TP*T)-3'), TAR DNA-binding protein 43 Authors: Chiang, C.H, Kuo, P.H, Doudeva, L.G, Wang, Y.T, Yuan, H.S. Deposit date: 2015-02-06 Release date: 2016-02-10 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.648 Å) Cite: Structural analysis of disease-related TDP-43 D169G mutation: linking enhanced stability and caspase cleavage efficiency to protein accumulation Sci Rep, 6, 2016
2MYF	Solution structure of RNA recognition motif of a cyclophilin33-like protein from Plasmodium falciparum Descriptor: RRM containing cyclophilin Authors: Ganguly, A.K, Bhavesh, N.S. Deposit date: 2015-01-22 Release date: 2016-01-27 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Solution structure of RNA recognition motif of a cyclophilin33-like protein from Plasmodium falciparum To be Published
5DDP	L-glutamine riboswitch bound with L-glutamine Descriptor: GLUTAMINE, MAGNESIUM ION, RNA (61-MER), ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.302 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5DDQ	L-glutamine riboswitch bound with L-glutamine soaked with Mn2+ Descriptor: GLUTAMINE, L-glutamine riboswitch RNA (61-MER), MAGNESIUM ION, ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
5DDR	L-glutamine riboswitch bound with L-glutamine soaked with Cs+ Descriptor: CESIUM ION, GLUTAMINE, L-glutamine riboswitch RNA (61-MER), ... Authors: Ren, A, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (2.605 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
2MQO	Structural Investigation of hnRNP L bound to RNA Descriptor: Protein Hnrnpl, RNA (5'-R(*CP*AP*CP*AP*CP*A)-3') Authors: Blatter, M, Allain, F. Deposit date: 2014-06-24 Release date: 2015-12-23 Last modified: 2024-05-01 Method: SOLUTION NMR Cite: Structural Investigation of hnRNP L bound to RNA To be Published
5DDO	Structural and Dynamic Basis for Low Affinity-High Selectivity Binding of L-glutamine by the Gln-riboswitch Descriptor: L-glutamine riboswitch (58-MER), U1 small nuclear ribonucleoprotein A Authors: Ren, A, Patel, D. Deposit date: 2015-08-25 Release date: 2015-12-23 Last modified: 2024-03-06 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch. Cell Rep, 13, 2015
4TLQ	Crystal structure of C-terminal RNA recognition motif of human ELAV type RNA binding protein-3 at 2.5 Angstrom resolution Descriptor: CUGBP Elav-like family member 2 Authors: Kashyap, M, Bhavesh, N.S. Deposit date: 2014-05-30 Release date: 2015-12-09 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.503 Å) Cite: Crystal structure of C-terminal RNA recognition motif of human ELAV type RNA binding protein-3 at 2.5 Angstrom resolution To Be Published
5CA5	Structure of the C. elegans NONO-1 homodimer Descriptor: 1,2-ETHANEDIOL, NONO-1 Authors: Knott, G.J, Bond, C.S. Deposit date: 2015-06-29 Release date: 2015-12-09 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Caenorhabditis elegans NONO-1: Insights into DBHS protein structure, architecture, and function. Protein Sci., 24, 2015
2MZS	NMR structure of the RRM2 domain of Hrb1 Descriptor: Protein HRB1 Authors: Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J. Deposit date: 2015-02-23 Release date: 2015-12-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Gbp2 interacts with THO/TREX through a novel type of RRM domain. Nucleic Acids Res., 44, 2016
2MZQ	NMR structure of the RRM3 domain of Gbp2 Descriptor: Single-strand telomeric DNA-binding protein GBP2 Authors: Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J. Deposit date: 2015-02-23 Release date: 2015-12-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Gbp2 interacts with THO/TREX through a novel type of RRM domain. Nucleic Acids Res., 44, 2016
2MZR	NMR structure of the RRM1 domain of Hrb1 Descriptor: Protein HRB1 Authors: Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J. Deposit date: 2015-02-23 Release date: 2015-12-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Gbp2 interacts with THO/TREX through a novel type of RRM domain. Nucleic Acids Res., 44, 2016
2MZT	NMR structure of the RRM3 domain of Hrb1 Descriptor: Protein HRB1 Authors: Martinez-Lumbreras, S, Seraphin, B, Perez-Canadillas, J. Deposit date: 2015-02-23 Release date: 2015-12-02 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Gbp2 interacts with THO/TREX through a novel type of RRM domain. Nucleic Acids Res., 44, 2016
5CYJ	X-ray structure of human RBPMS Descriptor: RNA-binding protein with multiple splicing Authors: Teplova, M, Farazi, T.A, Patel, D.J. Deposit date: 2015-07-30 Release date: 2015-09-30 Last modified: 2019-12-25 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS. Q. Rev. Biophys., 49, 2016
5DET	X-ray structure of human RBPMS in complex with the RNA Descriptor: RNA (5'-R(*UP*CP*AP*C)-3'), RNA (5'-R(P*UP*CP*AP*CP*U)-3'), RNA-binding protein with multiple splicing, ... Authors: Teplova, M, Farazi, T.A, Tuschl, T, Patel, D.J. Deposit date: 2015-08-25 Release date: 2015-09-23 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural basis underlying CAC RNA recognition by the RRM domain of dimeric RNA-binding protein RBPMS. Q. Rev. Biophys., 49, 2016
3JB9	Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution Descriptor: ADENOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... Authors: Yan, C, Hang, J, Wan, R, Huang, M, Wong, C, Shi, Y. Deposit date: 2015-08-09 Release date: 2015-09-23 Last modified: 2024-03-20 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: Structure of a yeast spliceosome at 3.6-angstrom resolution Science, 349, 2015

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