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3SLP
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BU of 3slp by Molmil
Crystal Structure of Lambda Exonuclease in Complex with a 12 BP Symmetric DNA Duplex
Descriptor: 5'-D(*GP*CP*GP*AP*CP*TP*AP*GP*TP*CP*GP*C)-3', CALCIUM ION, CHLORIDE ION, ...
Authors:Bell, C.E, Zhang, J.
Deposit date:2011-06-24
Release date:2011-07-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of {lambda} exonuclease in complex with DNA suggest an electrostatic ratchet mechanism for processivity.
Proc.Natl.Acad.Sci.USA, 108, 2011
2VIN
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BU of 2vin by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Descriptor: (2R)-1-(2,6-dimethylphenoxy)propan-2-amine, ACETATE ION, SULFATE ION, ...
Authors:Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
Deposit date:2007-12-05
Release date:2008-01-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
J.Med.Chem., 51, 2008
2VIP
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BU of 2vip by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Descriptor: 4-(2-AMINOETHOXY)-3,5-DICHLORO-N-[3-(1-METHYLETHOXY)PHENYL]BENZAMIDE, ACETATE ION, SULFATE ION, ...
Authors:Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
Deposit date:2007-12-05
Release date:2008-01-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
J.Med.Chem., 51, 2008
3S98
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BU of 3s98 by Molmil
human IFNAR1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Interferon alpha/beta receptor 1
Authors:Thomas, C, Garcia, K.C.
Deposit date:2011-06-01
Release date:2011-08-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural linkage between ligand discrimination and receptor activation by type I interferons.
Cell(Cambridge,Mass.), 146, 2011
2VLV
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BU of 2vlv by Molmil
Crystal structure of barley thioredoxin h isoform 2 in partially radiation-reduced state
Descriptor: THIOREDOXIN H ISOFORM 2.
Authors:Maeda, K, Hagglund, P, Finnie, C, Svensson, B, Henriksen, A.
Deposit date:2008-01-16
Release date:2008-04-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Barley Thioredoxin H Isoforms Hvtrxh1 and Hvtrxh2 Reveal Features Involved in Protein Recognition and Possibly in Discriminating the Isoform Specificity.
Protein Sci., 17, 2008
1M18
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BU of 1m18 by Molmil
LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Descriptor: Histone H2A.1, Histone H2B.1, Histone H3.2, ...
Authors:Suto, R.K, Edayathumangalam, R.S, White, C.L, Melander, C, Gottesfeld, J.M, Dervan, P.B, Luger, K.
Deposit date:2002-06-18
Release date:2003-02-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands
J.Mol.Biol., 326, 2003
3SMZ
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BU of 3smz by Molmil
Human raver1 RRM1-3 domains (residues 39-320)
Descriptor: Ribonucleoprotein PTB-binding 1, SULFATE ION
Authors:Rangarajan, E.S, Lee, J.H, Izard, T.
Deposit date:2011-06-28
Release date:2011-08-10
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Apo raver1 structure reveals distinct RRM domain orientations.
Protein Sci., 20, 2011
2VIW
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BU of 2viw by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Descriptor: 4-(2-aminoethoxy)-N-(3-chloro-2-ethoxy-5-piperidin-1-ylphenyl)-3,5-dimethylbenzamide, ACETATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B
Authors:Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
Deposit date:2007-12-05
Release date:2008-01-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator.
J.Med.Chem., 51, 2008
3SBZ
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BU of 3sbz by Molmil
Crystal Structure of Apo-MMACHC (1-244), a human B12 processing enzyme
Descriptor: GLYCEROL, MALONATE ION, Methylmalonic aciduria and homocystinuria type C protein
Authors:Koutmos, M, Gherasim, C, Smith, J.L, Banerjee, R.
Deposit date:2011-06-06
Release date:2011-06-22
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of multifunctionality in a vitamin B12-processing enzyme.
J.Biol.Chem., 286, 2011
3SC2
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BU of 3sc2 by Molmil
REFINED ATOMIC MODEL OF WHEAT SERINE CARBOXYPEPTIDASE II AT 2.2-ANGSTROMS RESOLUTION
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SERINE CARBOXYPEPTIDASE II (CPDW-II), alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Liao, D.-I, Remington, S.J.
Deposit date:1992-07-01
Release date:1993-10-31
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Refined atomic model of wheat serine carboxypeptidase II at 2.2-A resolution.
Biochemistry, 31, 1992
4C12
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BU of 4c12 by Molmil
X-ray Crystal Structure of Staphylococcus aureus MurE with UDP-MurNAc- Ala-Glu-Lys and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ...
Authors:Fulop, V, Roper, D.I, Ruane, K.M, Barreteau, H, Boniface, A, Dementin, S, Blanot, D, Mengin-Lecreulx, D, Gobec, S, Dessen, A, Dowson, C.G, Lloyd, A.J.
Deposit date:2013-08-09
Release date:2013-10-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Specificity Determinants for Lysine Incorporation in Staphylococcus Aureus Peptidoglycan as Revealed by the Structure of a Mure Enzyme Ternary Complex.
J.Biol.Chem., 288, 2013
2NX6
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BU of 2nx6 by Molmil
Structure of NOWA cysteine rich domain 6
Descriptor: Nematocyst outer wall antigen
Authors:Meier, S, Jensen, P.R, Adamczyk, P, Bachinger, H.P, Holstein, T.W, Engel, J, Ozbek, S, Grzesiek, S.
Deposit date:2006-11-17
Release date:2007-10-02
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Sequence-structure and structure-function analysis in cysteine-rich domains forming the ultrastable nematocyst wall.
J.Mol.Biol., 368, 2007
2V3Q
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BU of 2v3q by Molmil
Serendipitous discovery and X-ray structure of a human phosphate binding apolipoprotein
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, HUMAN PHOSPHATE BINDING PROTEIN, ...
Authors:Morales, R, Berna, A, Carpentier, P, Elias, M, Contreras-Martel, C, Renault, F, Nicodeme, M, Chesne-Seck, M.-L, Bernier, F, Dupuy, J, Schaeffer, C, Diemer, H, Van Dorsselaer, A, Fontecilla, J.C, Masson, P, Rochu, D, Chabriere, E.
Deposit date:2007-06-20
Release date:2008-07-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Tandem Use of X-Ray Crystallography and Mass Spectrometry to Obtain Ab Initio the Complete and Exact Amino Acids Sequence of Hpbp, a Human 38kDa Apolipoprotein
Proteins: Struct., Funct., Bioinf., 71, 2008
4C3U
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BU of 4c3u by Molmil
Extensive counter-ion interactions with subtilisin in aqueous medium, Cs derivative
Descriptor: CALCIUM ION, CESIUM ION, CHLORIDE ION, ...
Authors:Cianci, M, Negroni, J, Helliwell, J.R, Halling, P.J.
Deposit date:2013-08-27
Release date:2014-08-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Extensive Counter-Ion Interactions Seen at the Surface of Subtilisin in an Aqueous Medium
Rsc Adv, 2014
4BQ5
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BU of 4bq5 by Molmil
Structural analysis of an exo-beta-agarase
Descriptor: 3,6-anhydro-alpha-L-galactopyranose, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, 3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-3,6-anhydro-alpha-L-galactopyranose-(1-3)-beta-D-galactopyranose, ...
Authors:Pluvinage, B, Hehemann, J.H, Boraston, A.B.
Deposit date:2013-05-29
Release date:2013-08-14
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Substrate Recognition and Hydrolysis by a Family 50 Exo-Beta-Agarase Aga50D from the Marine Bacterium Saccharophagus Degradans
J.Biol.Chem., 288, 2013
3S62
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BU of 3s62 by Molmil
Structure of Fab fragment of malaria transmission blocking antibody 2A8 against P. vivax P25 protein
Descriptor: Fab fragment of antibody 2A8, Heavy chain, Light chain
Authors:Saxena, A.K.
Deposit date:2011-05-24
Release date:2012-04-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (4.01 Å)
Cite:Structure of Fab fragment of malaria transmission blocking antibody 2A8 against P. vivax P25 protein
Int.J.Biol.Macromol., 50, 2012
2VM1
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BU of 2vm1 by Molmil
Crystal structure of barley thioredoxin h isoform 1 crystallized using ammonium sulfate as precipitant
Descriptor: SULFATE ION, THIOREDOXIN H ISOFORM 1.
Authors:Maeda, K, Hagglund, P, Finnie, C, Svensson, B, Henriksen, A.
Deposit date:2008-01-21
Release date:2008-04-29
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Barley Thioredoxin H Isoforms Hvtrxh1 and Hvtrxh2 Reveal Features Involved in Protein Recognition and Possibly in Discriminating the Isoform Specificity.
Protein Sci., 17, 2008
3U3B
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BU of 3u3b by Molmil
Crystal Structure of Computationally Redesigned Four-Helix Bundle
Descriptor: computationally designed four-helix bundle protein
Authors:Murphy, G.S, Machius, M.
Deposit date:2011-10-05
Release date:2012-06-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.854 Å)
Cite:Increasing sequence diversity with flexible backbone protein design: the complete redesign of a protein hydrophobic core.
Structure, 20, 2012
3U6D
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BU of 3u6d by Molmil
MutM set 1 GpGo
Descriptor: DNA (5'-D(*A*GP*GP*TP*AP*GP*AP*TP*CP*CP*CP*GP*AP*CP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*GP*TP*CP*GP*(8OG)P*GP*AP*(TX)P*CP*TP*AP*CP*C)-3'), Formamidopyrimidine-DNA glycosylase, ...
Authors:Sung, R.J, Zhang, M, Qi, Y, Verdine, G.L.
Deposit date:2011-10-12
Release date:2012-04-25
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Sequence-dependent structural variation in DNA undergoing intrahelical inspection by the DNA glycosylase MutM.
J.Biol.Chem., 287, 2012
2VIQ
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BU of 2viq by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Descriptor: 4-(2-aminoethoxy)-N-(2,5-diethoxyphenyl)-3,5-dimethylbenzamide, ACETATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B
Authors:Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
Deposit date:2007-12-05
Release date:2008-01-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator.
J.Med.Chem., 51, 2008
1M19
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BU of 1m19 by Molmil
LIGAND BINDING ALTERS THE STRUCTURE AND DYNAMICS OF NUCLEOSOMAL DNA
Descriptor: 3-AMINO-(DIMETHYLPROPYLAMINE), 4-AMINO-(1-METHYLIMIDAZOLE)-2-CARBOXYLIC ACID, 4-AMINO-(1-METHYLPYRROLE)-2-CARBOXYLIC ACID, ...
Authors:Suto, R.K, Edayathumangalam, R.S, White, C.L, Melander, C, Gottesfeld, J.M, Dervan, P.B, Luger, K.
Deposit date:2002-06-18
Release date:2003-02-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structures of Nucleosome Core Particles in Complex with Minor Groove DNA-binding Ligands
J.Mol.Biol., 326, 2003
2VLT
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BU of 2vlt by Molmil
Crystal structure of barley thioredoxin h isoform 2 in the oxidized state
Descriptor: THIOREDOXIN H ISOFORM 2.
Authors:Maeda, K, Hagglund, P, Finnie, C, Svensson, B, Henriksen, A.
Deposit date:2008-01-16
Release date:2008-04-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structures of Barley Thioredoxin H Isoforms Hvtrxh1 and Hvtrxh2 Reveal Features Involved in Protein Recognition and Possibly in Discriminating the Isoform Specificity.
Protein Sci., 17, 2008
3U1I
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BU of 3u1i by Molmil
Dengue virus protease covalently bound to a peptide
Descriptor: SULFATE ION, Serine protease NS3, Serine protease subunit NS2B, ...
Authors:Noble, C.G.
Deposit date:2011-09-29
Release date:2011-11-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Ligand-bound structures of the dengue virus protease reveal the active conformation
J.Virol., 86, 2012
4C10
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BU of 4c10 by Molmil
Cryo-EM reconstruction of empty enterovirus 71 in complex with a neutralizing antibody E19
Descriptor: CHLORIDE ION, EV19 5 C1-6 F1 C11, SODIUM ION, ...
Authors:Plevka, P, Perera, R, Cardosa, J, Suksatu, A, Kuhn, R.J, Rossmann, M.G.
Deposit date:2013-08-08
Release date:2014-02-05
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (13 Å)
Cite:Neutralizing Antibodies Can Initiate Genome Release from Human Enterovirus 71.
Proc.Natl.Acad.Sci.USA, 111, 2014
2VIO
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BU of 2vio by Molmil
Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
Descriptor: 4-(2-aminoethoxy)-3,5-dichlorobenzoic acid, ACETATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR CHAIN B
Authors:Frederickson, M, Callaghan, O, Chessari, G, Congreve, M, Cowan, S.R, Matthews, J.E, McMenamin, R, Smith, D, Vinkovic, M, Wallis, N.G.
Deposit date:2007-12-05
Release date:2008-01-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fragment-Based Discovery of Mexiletine Derivatives as Orally Bioavailable Inhibitors of Urokinase-Type Plasminogen Activator
J.Med.Chem., 51, 2008

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