Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1TFR
DownloadVisualize
BU of 1tfr by Molmil
RNASE H FROM BACTERIOPHAGE T4
Descriptor: MAGNESIUM ION, T4 RNASE H
Authors:Mueser, T.C, Nossal, N.G, Hyde, C.C.
Deposit date:1996-04-27
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structure of bacteriophage T4 RNase H, a 5' to 3' RNA-DNA and DNA-DNA exonuclease with sequence similarity to the RAD2 family of eukaryotic proteins.
Cell(Cambridge,Mass.), 85, 1996
1LBS
DownloadVisualize
BU of 1lbs by Molmil
LIPASE (E.C.3.1.1.3) (TRIACYLGLYCEROL HYDROLASE)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LIPASE B, N-HEXYLPHOSPHONATE ETHYL ESTER
Authors:Uppenberg, J, Jones, T.A.
Deposit date:1995-07-11
Release date:1995-10-15
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystallographic and molecular-modeling studies of lipase B from Candida antarctica reveal a stereospecificity pocket for secondary alcohols.
Biochemistry, 34, 1995
1NRJ
DownloadVisualize
BU of 1nrj by Molmil
Signal Recognition Particle Receptor Beta-Subunit in Complex with the SRX Domain from the Alpha-Subunit
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Schwartz, T.
Deposit date:2003-01-24
Release date:2003-03-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for the Function of the beta Subunit of the Eukaryotic Signal Recognition Particle Receptor
Cell(Cambridge,Mass.), 112, 2003
1PN2
DownloadVisualize
BU of 1pn2 by Molmil
Crystal structure analysis of the selenomethionine labelled 2-enoyl-CoA hydratase 2 domain of Candida tropicalis multifunctional enzyme type 2
Descriptor: 1,2-ETHANEDIOL, Peroxisomal hydratase-dehydrogenase-epimerase
Authors:Koski, M.K, Haapalainen, A.M, Hiltunen, J.K, Glumoff, T.
Deposit date:2003-06-12
Release date:2004-04-13
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A Two-domain Structure of One Subunit Explains Unique Features of Eukaryotic Hydratase 2.
J.Biol.Chem., 279, 2004
7VWK
DownloadVisualize
BU of 7vwk by Molmil
The product template domain of AviM
Descriptor: Polyketide synthase
Authors:Feng, Y, Yang, X, Zheng, J.
Deposit date:2021-11-10
Release date:2022-06-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Streptomyces viridochromogenes product template domain represents an evolutionary intermediate between dehydratase and aldol cyclase of type I polyketide synthases.
Commun Biol, 5, 2022
7BUP
DownloadVisualize
BU of 7bup by Molmil
Crystal structure of PCNA from pathogenic yeast Candida albicans
Descriptor: Proliferating cell nuclear antigen
Authors:sundaram, R, Vasudevan, D.
Deposit date:2020-04-07
Release date:2021-02-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural analyses of PCNA from the fungal pathogen Candida albicans identify three regions with species-specific conformations.
Febs Lett., 595, 2021
4R7P
DownloadVisualize
BU of 4r7p by Molmil
Human UDP-glucose pyrophosphorylase isoform 1 in complex with UDP-glucose
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
Authors:Fuehring, J, Cramer, J.T, Schneider, J, Baruch, P, Gerardy-Schahn, R, Fedorov, R.
Deposit date:2014-08-28
Release date:2015-04-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:A Quaternary Mechanism Enables the Complex Biological Functions of Octameric Human UDP-glucose Pyrophosphorylase, a Key Enzyme in Cell Metabolism.
Sci Rep, 5
4R4S
DownloadVisualize
BU of 4r4s by Molmil
Crystal structure of chimeric beta-lactamase cTEM-19m at 1.1 angstrom resolution
Descriptor: Beta-lactamase TEM,Beta-lactamase PSE-4, CHLORIDE ION, MAGNESIUM ION
Authors:Park, J, Gobeil, S, Pelletier, J.N, Berghuis, A.M.
Deposit date:2014-08-19
Release date:2015-11-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The Structural Dynamics of Engineered beta-Lactamases Vary Broadly on Three Timescales yet Sustain Native Function.
Sci Rep, 9, 2019
7BYD
DownloadVisualize
BU of 7byd by Molmil
Crystal structure of SN45 TCR in complex with lipopeptide-bound Mamu-B*05104
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, B protein, ...
Authors:Morita, D, Sugita, M, Iwashita, C.
Deposit date:2020-04-22
Release date:2021-03-31
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.80003262 Å)
Cite:Crystal structure of the ternary complex of TCR, MHC class I and lipopeptides.
Int.Immunol., 32, 2020
7BTJ
DownloadVisualize
BU of 7btj by Molmil
Crystal structure of Pennisetum glaucum monodehydroascorbate reductase in complex with FADH2
Descriptor: DIHYDROFLAVINE-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Pennisetum glaucum monodehydroascorbate reductase
Authors:Sonkar, K.S, Achary, M.M, Reddy, M.K, Arulandu, A.
Deposit date:2020-04-01
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.373 Å)
Cite:Crystal structure of Pennisetum glaucum monodehydroascorbate reductase
To Be Published
2YIW
DownloadVisualize
BU of 2yiw by Molmil
triazolopyridine inhibitors of p38 kinase
Descriptor: 1-(3-tert-butyl-1-phenyl-1H-pyrazol-5-yl)-3-(2-{[3-(1-methylethyl)[1,2,4]triazolo[4,3-a]pyridin-6-yl]sulfanyl}benzyl)urea, 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine, MITOGEN-ACTIVATED PROTEIN KINASE 14
Authors:Millan, D.S, Anderson, M, Bunnage, M.E, Burrows, J.L, Butcher, K.J, Dodd, P.G, Evans, T.J, Fairman, D.A, Hughes, S.J, Irving, S.L, Kilty, I.C, Lemaitre, A, Lewthwaite, R.A, Mahnke, A, Mathais, J.P, Philip, J, Phillips, C, Smith, R.T, Stefamiak, M.H, Yeadon, M.
Deposit date:2011-05-17
Release date:2011-11-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design and Synthesis of Inhaled P38 Inhibitors for the Treatment of Chronic Obstructive Pulmonary Disease.
J.Med.Chem., 54, 2011
6STK
DownloadVisualize
BU of 6stk by Molmil
Crystal structure of the CC-chemokine 5 (CCL5) E66S mutation
Descriptor: ACETATE ION, C-C motif chemokine 5, GLYCEROL
Authors:Ramirez-Escudero, M, Janssen, B.J.C.
Deposit date:2019-09-10
Release date:2020-09-02
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structural characterization of anti-CCL5 activity of the tick salivary protein evasin-4.
J.Biol.Chem., 295, 2020
6G4A
DownloadVisualize
BU of 6g4a by Molmil
FLN5 (full length)
Descriptor: Gelation factor
Authors:Waudby, C.A, Wlodarski, T, Karyadi, M.-E, Cassaignau, A.M.E, Chan, S.H.S, Wentink, A.S, Schmidt-Engler, J.M, Camilloni, C, Vendruscolo, M, Cabrita, L.D, Christodoulou, J.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mapping energy landscapes of a growing filamin domain reveals an intermediate associated with proline isomerization during biosynthesis
To Be Published
4QXM
DownloadVisualize
BU of 4qxm by Molmil
Crystal structure of the InhA:GSK_SB713 complex
Descriptor: Enoyl-[acyl-carrier-protein] reductase [NADH], N-(2-chloro-4-fluorobenzyl)-4-[(3,5-dimethyl-1H-pyrazol-1-yl)methyl]benzamide, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Gulten, G, Sacchettini, J.C.
Deposit date:2014-07-21
Release date:2015-07-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:N-Benzyl-4-((heteroaryl)methyl)benzamides: A New Class of Direct NADH-Dependent 2-trans Enoyl-Acyl Carrier Protein Reductase (InhA) Inhibitors with Antitubercular Activity.
Chemmedchem, 11, 2016
6THY
DownloadVisualize
BU of 6thy by Molmil
Botulinum neurotoxin A3 Hc domain in complex with GD1a
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BoNT/A3, ...
Authors:Gregory, K.S, Acharya, K.R, Liu, S.M.
Deposit date:2019-11-21
Release date:2020-01-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of botulinum neurotoxin subtype A3 cell binding domain in complex with GD1a co-receptor ganglioside.
Febs Open Bio, 10, 2020
4R30
DownloadVisualize
BU of 4r30 by Molmil
Structure of human laforin dual specificity phosphatase domain
Descriptor: BETA-MERCAPTOETHANOL, Laforin, SULFATE ION
Authors:Sankhala, R.S, Koksal, A.C, Cingolani, G.
Deposit date:2014-08-13
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dimeric quaternary structure of human laforin.
J.Biol.Chem., 290, 2015
7WCE
DownloadVisualize
BU of 7wce by Molmil
Crystal structure of HIV-1 integrase catalytic core domain in complex with (2S)-2-(tert-Butoxy)-2-(10-fluoro-2-(2-hydroxy-4-methylphenyl)-1,4-dimethyl-5-(methylsulfonyl)-5,6-dihydrophenanthridin-3-yl)acetic acid
Descriptor: (2S)-2-[10-fluoranyl-1,4-dimethyl-2-(4-methyl-2-oxidanyl-phenyl)-5-methylsulfonyl-6H-phenanthridin-3-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, GLYCEROL, Integrase catalytic, ...
Authors:Taoda, Y, Sekiguchi, Y.
Deposit date:2021-12-20
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Discovery of tricyclic HIV-1 integrase-LEDGF/p75 allosteric inhibitors by intramolecular direct arylation reaction.
Bioorg.Med.Chem.Lett., 64, 2022
6GDA
DownloadVisualize
BU of 6gda by Molmil
Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form soaked with Spermine
Descriptor: Cytochrome c iso-1, HEME C, SPERMINE, ...
Authors:Rennie, M.L, Fox, G.C, Crowley, P.B.
Deposit date:2018-04-23
Release date:2019-05-01
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Tuning Protein Frameworks via Auxiliary Supramolecular Interactions.
Acs Nano, 13, 2019
4RDP
DownloadVisualize
BU of 4rdp by Molmil
Crystal structure of Cmr4
Descriptor: CRISPR system Cmr subunit Cmr4
Authors:Shao, Y, Tang, L, Li, H.
Deposit date:2014-09-19
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Essential Structural and Functional Roles of the Cmr4 Subunit in RNA Cleavage by the Cmr CRISPR-Cas Complex.
Cell Rep, 9, 2014
4F2N
DownloadVisualize
BU of 4f2n by Molmil
Crystal structure of iron superoxide dismutase from Leishmania major
Descriptor: FE (II) ION, Superoxide dismutase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2012-05-08
Release date:2012-05-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Iron superoxide dismutases in eukaryotic pathogens: new insights from Apicomplexa and Trypanosoma structures.
Acta Crystallogr F Struct Biol Commun, 71, 2015
6GID
DownloadVisualize
BU of 6gid by Molmil
High resolution crystal structure of substrate-free human neprilysin
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Moss, S, Subramanian, V, Acharya, K.R.
Deposit date:2018-05-10
Release date:2018-06-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High resolution crystal structure of substrate-free human neprilysin.
J. Struct. Biol., 204, 2018
5KDK
DownloadVisualize
BU of 5kdk by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-08
Release date:2017-06-14
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Crystal structure of truncated hemolysin A from P. mirabilis at 2.0 Angstroms in high salt
To Be Published
3LGB
DownloadVisualize
BU of 3lgb by Molmil
Crystal Structure of the Fe-S Domain of the yeast DNA primase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA primase large subunit, GLYCEROL, ...
Authors:Sauguet, L, Pellegrini, L.
Deposit date:2010-01-20
Release date:2010-04-21
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Shared Active Site Architecture between the Large Subunit of Eukaryotic Primase and DNA Photolyase
PLOS ONE, 5, 2010
6TT3
DownloadVisualize
BU of 6tt3 by Molmil
Crystal structure of 'Res_S2 mutant human Angiotensin-1 converting enzyme N-domain in complex with SG6.
Descriptor: (2~{S})-1-[(2~{S})-2-[[(1~{S})-1-[(2~{S})-1-[(2~{S})-2-azanyl-4-oxidanyl-4-oxidanylidene-butanoyl]pyrrolidin-2-yl]-2-oxidanyl-2-oxidanylidene-ethyl]amino]propanoyl]pyrrolidine-2-carboxylic acid, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Cozier, G.E, Acharya, K.R.
Deposit date:2019-12-23
Release date:2020-04-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:ACE-domain selectivity extends beyond direct interacting residues at the active site.
Biochem.J., 477, 2020
5KEH
DownloadVisualize
BU of 5keh by Molmil
Truncated hemolysin A from P. mirabilis at 2.0 Angstroms resolution crystallized in a high salt condition
Descriptor: Hemolysin
Authors:Novak, W.R.P, Bhattacharyya, B, Weaver, T.M.
Deposit date:2016-06-09
Release date:2017-03-22
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.551 Å)
Cite:Proteolysis of truncated hemolysin A yields a stable dimerization interface.
Acta Crystallogr F Struct Biol Commun, 73, 2017

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon