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8TBQ
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The crystal structure of human VISTA extra cellular domain in complex with Fab fragment of pH-selective anti-VISTA antibody
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, SNS-101 Fab heavy chain, ...
Authors:van der Horst, E.H, Mukherjee, A, Thisted, T.
Deposit date:2023-06-29
Release date:2024-03-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.593 Å)
Cite:VISTA checkpoint inhibition by pH-selective antibody SNS-101 with optimized safety and pharmacokinetic profiles enhances PD-1 response.
Nat Commun, 15, 2024
1FHL
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BU of 1fhl by Molmil
CRYSTAL STRUCTURE OF BETA-1,4-GALACTANASE FROM ASPERGILLUS ACULEATUS AT 293K
Descriptor: BETA-1,4-GALACTANASE
Authors:Ryttersgaard, C, Larsen, S.
Deposit date:2000-08-02
Release date:2003-06-03
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Aspergillus aculeatus beta-1,4-Galactanase: Substrate Recognition and Relations to Other Glycoside Hydrolases in Clan GH-A
Biochemistry, 41, 2002
8Q6L
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BU of 8q6l by Molmil
human Carbonic Anhydrase I in complex with 3,4-dihydro-1H-benzo[c][1,2]oxaborinin-1-ol
Descriptor: 1,1-bis(oxidanyl)-3,4-dihydro-2,1$l^{4}-benzoxaborinine, Carbonic anhydrase 1, SODIUM ION, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2023-08-13
Release date:2024-08-21
Last modified:2025-04-16
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Benzoxaborinine, New Chemotype for Carbonic Anhydrase Inhibition: Ex Novo Synthesis, Crystallography, In Silico Studies, and Anti-Melanoma Cell Line Activity.
J.Med.Chem., 67, 2024
8Q7G
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BU of 8q7g by Molmil
Human Carbonic Anhydrase I in complex with 3,4-dihydro-1H-benzo[c][1,2]oxaborinin-1-ol pH 7.0
Descriptor: 1,1-bis(oxidanyl)-3,4-dihydro-2,1$l^{4}-benzoxaborinine, ACETATE ION, Carbonic anhydrase 1, ...
Authors:Angeli, A, Ferraroni, M.
Deposit date:2023-08-16
Release date:2024-08-28
Last modified:2025-03-12
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Benzoxaborinine, New Chemotype for Carbonic Anhydrase Inhibition: Ex Novo Synthesis, Crystallography, In Silico Studies, and Anti-Melanoma Cell Line Activity.
J.Med.Chem., 67, 2024
7MOZ
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BU of 7moz by Molmil
Structure of HDAC2 in complex with a macrocyclic inhibitor (compound 25)
Descriptor: (1R,3S,6S,18R,27R)-6-(6,6-dihydroxyoctyl)-5,8,18,27,34-pentaazahexacyclo[25.2.2.1~7,10~.1~11,15~.1~14,18~.0~1,3~]tetratriaconta-7,9,11(33),12,14,16-hexaene-4,32-dione (non-preferred name), CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Klein, D.J, Yu, W.
Deposit date:2021-05-03
Release date:2021-07-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.543 Å)
Cite:Discovery of macrocyclic HDACs 1, 2, and 3 selective inhibitors for HIV latency reactivation.
Bioorg.Med.Chem.Lett., 47, 2021
9D04
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BU of 9d04 by Molmil
CO-CRYSTAL STRUCTURE OF CIRCULARLY PERMUTED HUMAN TASPASE-1 BOUND TO LIGAND SMDC994967 1-(ETHENESULFONYL)-4-{[4- (TRIFLUOROMETHOXY)PHENYL]METHYL}PIPERAZINE
Descriptor: 1-(ethenylsulfonyl)-4-{[4-(trifluoromethoxy)phenyl]methyl}piperazine, CHLORIDE ION, SODIUM ION, ...
Authors:Delker, S.L, Edwards, T.E, Abendroth, J.
Deposit date:2024-08-06
Release date:2025-08-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:CO-CRYSTAL STRUCTURE OF CIRCULARLY PERMUTED HUMAN TASPASE-1 BOUND TO LIGAND SMDC994967 1-(ETHENESULFONYL)-4-{[4- (TRIFLUOROMETHOXY)PHENYL]METHYL}PIPERAZINE
TO BE PUBLISHED
9D03
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BU of 9d03 by Molmil
Co-crystal structure of circularly permuted human taspase-1 bound to ligand SMDC1014689 1-(ethenesulfonyl)-4-{[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}piperazine
Descriptor: 1-(ethenylsulfonyl)-4-{[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}piperazine, CHLORIDE ION, SODIUM ION, ...
Authors:Delker, S.L, Edwards, T.E, Abendroth, J.
Deposit date:2024-08-06
Release date:2025-08-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Co-crystal structure of circularly permuted human taspase-1 bound to ligand SMDC1014689 1-(ethenesulfonyl)-4-{[3-fluoro-4-(trifluoromethoxy)phenyl]methyl}piperazine
To Be Published
8D47
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BU of 8d47 by Molmil
fp.006 Fab in complex with SARS-CoV-2 Fusion Peptide
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PHOSPHATE ION, ...
Authors:Abernathy, M.E, Barnes, C.O.
Deposit date:2022-06-01
Release date:2022-12-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Human neutralizing antibodies to cold linear epitopes and subdomain 1 of the SARS-CoV-2 spike glycoprotein.
Sci Immunol, 8, 2023
6ZMJ
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BU of 6zmj by Molmil
Crystal structure of human GFAT-1 R203H
Descriptor: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
Authors:Ruegenberg, S, Mayr, F, Miethe, S, Atanassov, I, Baumann, U, Denzel, M.S.
Deposit date:2020-07-02
Release date:2020-08-05
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.774 Å)
Cite:Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
4UDI
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BU of 4udi by Molmil
Crystal structure of b-1,4-mannopyranosyl-chitobiose phosphorylase at 1.85 Angstrom from unknown human gut bacteria (Uhgb_MP)
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, PHOSPHATE ION, ...
Authors:Ladeveze, S, Cioci, G, Potocki-Veronese, G, Tranier, S, Mourey, L.
Deposit date:2014-12-10
Release date:2015-05-27
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Bases for N-Glycan Processing by Mannoside Phosphorylase.
Acta Crystallogr.,Sect.D, 71, 2015
1FJ6
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BU of 1fj6 by Molmil
FRUCTOSE-1,6-BISPHOSPHATASE (MUTANT Y57W) PRODUCT/ZN COMPLEX (R-STATE)
Descriptor: 6-O-phosphono-beta-D-fructofuranose, FRUCTOSE-1,6-BISPHOSPHATASE, PHOSPHATE ION, ...
Authors:Iancu, C.V, Choe, J.Y, Honzatko, R.B.
Deposit date:2000-08-07
Release date:2000-10-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tryptophan fluorescence reveals the conformational state of a dynamic loop in recombinant porcine fructose-1,6-bisphosphatase.
Biochemistry, 39, 2000
6XOF
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BU of 6xof by Molmil
Crystal structure of SCLam, a non-specific endo-beta-1,3(4)-glucanase from family GH16
Descriptor: CALCIUM ION, GH16 family protein, GLYCEROL
Authors:Liberato, M.V, Bernardes, A, Polikarpov, I, Squina, F.
Deposit date:2020-07-07
Release date:2021-02-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds.
J.Biol.Chem., 296, 2021
6XQM
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BU of 6xqm by Molmil
Crystal structure of SCLam E144S mutant, a non-specific endo-beta-1,3(4)-glucanase from family GH16, co-crystallized with laminarihexaose, presenting a laminaribiose and a glucose at active site
Descriptor: CALCIUM ION, GH16 family protein, PHOSPHATE ION, ...
Authors:Liberato, M.V, Squina, F.
Deposit date:2020-07-09
Release date:2021-02-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Insights into the dual cleavage activity of the GH16 laminarinase enzyme class on beta-1,3 and beta-1,4 glycosidic bonds.
J.Biol.Chem., 296, 2021
8V9H
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BU of 8v9h by Molmil
GES-5-NA-1-157 complex
Descriptor: (5R)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:Smith, C.A, Stewart, N.K, Vakulenko, S.B.
Deposit date:2023-12-08
Release date:2024-04-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Restricted Rotational Flexibility of the C5 alpha-Methyl-Substituted Carbapenem NA-1-157 Leads to Potent Inhibition of the GES-5 Carbapenemase.
Acs Infect Dis., 10, 2024
7RDJ
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BU of 7rdj by Molmil
Crystal structure of PCDN-16B, an anti-HIV antibody from the PCDN bnAb lineage (non-cysteinylated state)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, PCDN-16B Fab heavy chain, ...
Authors:Omorodion, O, Wilson, I.A.
Deposit date:2021-07-09
Release date:2021-11-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and Biochemical Characterization of Cysteinylation in Broadly Neutralizing Antibodies to HIV-1.
J.Mol.Biol., 433, 2021
9C2K
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BU of 9c2k by Molmil
The crystal structure of HIV-1 Rev Response Element Stem-Loop II in complex with a Fab
Descriptor: BL3-6 Fab heavy chain, BL3-6 Fab light chain, GLYCEROL, ...
Authors:Ojha, M, Koirala, D.
Deposit date:2024-05-31
Release date:2025-05-28
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of HIV-1 RRE SL2 in complex with Fab BL3-6
To Be Published
1FOB
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BU of 1fob by Molmil
CRYSTAL STRUCTURE OF BETA-1,4-GALACTANASE FROM ASPERGILLUS ACULEATUS AT 100K
Descriptor: BETA-1,4-GALACTANASE, CALCIUM ION
Authors:Ryttersgaard, C, Larsen, S.
Deposit date:2000-08-27
Release date:2003-06-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Aspergillus aculeatus beta-1,4-Galactanase: Substrate Recognition and Relations to Other Glycoside Hydrolases in Clan GH-A
Biochemistry, 41, 2002
7RB1
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BU of 7rb1 by Molmil
Isocitrate Lyase-1 from Mycobacterium tuberculosis covalently modified by 5-descarboxy-5-nitro-D-isocitric acid
Descriptor: (3E)-3-(hydroxyimino)propanoic acid, GLYCEROL, GLYOXYLIC ACID, ...
Authors:Krieger, I.V, Mellott, D, Meek, T, Sacchettini, J.C.
Deposit date:2021-07-05
Release date:2021-12-01
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Mechanism-Based Inactivation of Mycobacterium tuberculosis Isocitrate Lyase 1 by (2 R ,3 S )-2-Hydroxy-3-(nitromethyl)succinic acid.
J.Am.Chem.Soc., 143, 2021
6V3U
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BU of 6v3u by Molmil
Crystal Structure of the NDM_FIM-1 like Metallo-beta-Lactamase from Erythrobacter litoralis in the Mono-Zinc Form
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase II, ISOPROPYL ALCOHOL, ...
Authors:Kim, Y, Maltseva, N, Mulligan, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-11-26
Release date:2020-01-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the NDM_FIM-1 like Metallo-beta-Lactamase from Erythrobacter litoralis in the Mono-Zinc Form
To Be Published
1FJM
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BU of 1fjm by Molmil
Protein serine/threonine phosphatase-1 (alpha isoform, type 1) complexed with microcystin-LR toxin
Descriptor: BETA-MERCAPTOETHANOL, MANGANESE (II) ION, PROTEIN SERINE/THREONINE PHOSPHATASE-1 (ALPHA ISOFORM, ...
Authors:Goldberg, J, Nairn, A.C, Kuriyan, J.
Deposit date:1995-12-17
Release date:1996-06-20
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Three-dimensional structure of the catalytic subunit of protein serine/threonine phosphatase-1.
Nature, 376, 1995
4V11
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BU of 4v11 by Molmil
Structure of Synaptotagmin-1 with SV2A peptide phosphorylated at Thr84
Descriptor: CALCIUM ION, GLYCEROL, SYNAPTIC VESICLE GLYCOPROTEIN 2A, ...
Authors:Zhang, N, Gordon, S.L, Fritsch, M.J, Esoof, N, Campbell, D, Gourlay, R, Velupillai, S, Macartney, T, Peggie, M, vanAalten, D.M.F, Cousin, M.A, Alessi, D.R.
Deposit date:2014-09-22
Release date:2015-02-25
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Phosphorylation of Synaptic Vesicle Protein 2A at Thr84 by Casein Kinase 1 Family Kinases Controls the Specific Retrieval of Synaptotagmin-1.
J.Neurosci., 35, 2015
8EZO
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BU of 8ezo by Molmil
Lysozyme Anomalous Dataset at 220 K and 7.1 keV
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Lysozyme C, ...
Authors:Doukov, T, Yabukarski, F.
Deposit date:2022-11-01
Release date:2023-03-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Obtaining anomalous and ensemble information from protein crystals from 220 K up to physiological temperatures.
Acta Crystallogr D Struct Biol, 79, 2023
6UY8
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BU of 6uy8 by Molmil
Crystal structure of the STAC3 tandem SH3 domains - P269R, K329N
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, SH3 and cysteine-rich domain-containing protein 3
Authors:Rufenach, B, Van Petegem, F.
Deposit date:2019-11-12
Release date:2020-06-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.649 Å)
Cite:Multiple Sequence Variants in STAC3 Affect Interactions with CaV1.1 and Excitation-Contraction Coupling.
Structure, 28, 2020
8RVD
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BU of 8rvd by Molmil
Unbound murine diabetogenic 4.1 TCR
Descriptor: 1,2-ETHANEDIOL, 4.1 TCR alpha chain, 4.1 TCR beta chain, ...
Authors:Lopez-Sagaseta, J, Erausquin, E.
Deposit date:2024-02-01
Release date:2025-02-12
Method:X-RAY DIFFRACTION (3 Å)
Cite:Unbound murine diabetogenic 4.1 TCR
To Be Published
7O29
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BU of 7o29 by Molmil
Crystal structure of the human METTL3-METTL14 complex bound to Compound 20 (ADO_AD_044)
Descriptor: 4-[4-[(4,4-dimethylpiperidin-1-yl)methyl]-2-fluoranyl-phenyl]-9-[6-(methylamino)pyrimidin-4-yl]-1,4,9-triazaspiro[5.5]undecan-2-one, ACETATE ION, N6-adenosine-methyltransferase catalytic subunit, ...
Authors:Bedi, R.K, Dolbois, A, Caflisch, A.
Deposit date:2021-03-30
Release date:2021-09-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:1,4,9-Triazaspiro[5.5]undecan-2-one Derivatives as Potent and Selective METTL3 Inhibitors.
J.Med.Chem., 64, 2021

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