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6OBS
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BU of 6obs by Molmil
PP1 Y134K
Descriptor: GLYCEROL, MANGANESE (II) ION, PHOSPHATE ION, ...
Authors:Choy, M.S, Moon, T.M, Bray, J.A, Archuleta, T.L, Shi, W, Peti, W, Page, R.
Deposit date:2019-03-21
Release date:2019-09-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:SDS22 selectively recognizes and traps metal-deficient inactive PP1.
Proc.Natl.Acad.Sci.USA, 116, 2019
8E4R
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BU of 8e4r by Molmil
Room-temperature X-ray structure of SARS-CoV-2 main protease H41A miniprecursor mutant in complex with GC373
Descriptor: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, Replicase polyprotein 1ab
Authors:Coates, L, Kneller, D.W, Kovalevsky, A.
Deposit date:2022-08-18
Release date:2022-11-23
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Unmasking the Conformational Stability and Inhibitor Binding to SARS-CoV-2 Main Protease Active Site Mutants and Miniprecursor.
J.Mol.Biol., 434, 2022
8UPI
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BU of 8upi by Molmil
Structure of a periplasmic peptide binding protein from Mesorhizobium sp. AP09 bound to aminoserine
Descriptor: 1,2-ETHANEDIOL, AMINOSERINE, CALCIUM ION, ...
Authors:Frkic, R.L, Smith, O.B, Rahman, M, Kaczmarski, J.A, Jackson, C.J.
Deposit date:2023-10-22
Release date:2023-11-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Identification and Characterization of a Bacterial Periplasmic Solute Binding Protein That Binds l-Amino Acid Amides.
Biochemistry, 63, 2024
6FES
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BU of 6fes by Molmil
Crystal structure of novel repeat protein BRIC2 fused to DARPin D12
Descriptor: 1,2-ETHANEDIOL, D12_BRIC2, a synthetic protein,D12_BRIC2, ...
Authors:ElGamacy, M, Coles, M, Ernst, P, Zhu, H, Hartmann, M.D, Plueckthun, A, Lupas, A.
Deposit date:2018-01-03
Release date:2018-09-05
Last modified:2025-10-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:An Interface-Driven Design Strategy Yields a Novel, Corrugated Protein Architecture.
ACS Synth Biol, 7, 2018
9AV1
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BU of 9av1 by Molmil
Crystal structure of E. coli GuaB dCBS with inhibitor GNE9123
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-(6-chloropyridin-3-yl)-N~2~-(1,4-dihydro-2H-pyrano[3,4-c]quinolin-9-yl)-L-alaninamide
Authors:Harris, S.F, Wu, P.
Deposit date:2024-03-01
Release date:2025-01-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Discovery of GuaB inhibitors with efficacy against Acinetobacter baumannii infection.
Mbio, 15, 2024
7POY
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BU of 7poy by Molmil
Spin labeled IPNS S55C variant in complex with Fe, ACV and NO
Descriptor: FE (III) ION, Isopenicillin N synthase, L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE, ...
Authors:Rabe, P, Clifton, I, Walla, C, Schofield, C.J.
Deposit date:2021-09-10
Release date:2022-07-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Spectroscopic studies reveal details of substrate-induced conformational changes distant from the active site in isopenicillin N synthase.
J.Biol.Chem., 298, 2022
6QW7
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BU of 6qw7 by Molmil
Crystal structure of L2 complexed with relebactam (16 hour soak)
Descriptor: (2S,5R)-1-formyl-N-(piperidin-4-yl)-5-[(sulfooxy)amino]piperidine-2-carboxamide, Beta-lactamase, D-SERINE
Authors:Tooke, C.L, Hinchliffe, P, Spencer, J.
Deposit date:2019-03-05
Release date:2019-08-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Molecular Basis of Class A beta-Lactamase Inhibition by Relebactam.
Antimicrob.Agents Chemother., 63, 2019
6QVP
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BU of 6qvp by Molmil
Crystal structure of the peptidoglycan-binding domain of SiiA from Salmonella enterica
Descriptor: Inner membrane protein, PHOSPHATE ION
Authors:Kirchweger, P, Muller, Y.A.
Deposit date:2019-03-04
Release date:2019-08-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and functional characterization of SiiA, an auxiliary protein from the SPI4-encoded type 1 secretion system from Salmonella enterica.
Mol.Microbiol., 112, 2019
6XSZ
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BU of 6xsz by Molmil
The structure of the M60 catalytic domain from Clostridium perfringens ZmpC
Descriptor: 1,2-ETHANEDIOL, ZINC ION, ZmpC Glycopeptidase
Authors:Pluvinage, B, Boraston, A.B.
Deposit date:2020-07-16
Release date:2021-02-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Molecular insights into architecturally complex glycopeptidases
Proc.Natl.Acad.Sci.USA, 2021
8V98
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BU of 8v98 by Molmil
GII.24 Loreto 1972 norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Capsid protein VP1
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
9JYS
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BU of 9jys by Molmil
Crystal structure of the PIN1 and fragment 5 complex.
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 4-(aminomethyl)-N,N-dimethyl-aniline, Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, ...
Authors:Xiao, Q.J, Wu, T.T, Shu, H.L, Qin, W.M.
Deposit date:2024-10-12
Release date:2025-10-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Fragment-Based Compound Screening Based on PIN1 Crystals
To Be Published
9AVD
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BU of 9avd by Molmil
Mitochondrial fission 1 protein Fis1 structure T34D mutation
Descriptor: Mitochondrial fission 1 protein
Authors:Mathews, I.I, Pokhrel, S, Wakatsuki, S.
Deposit date:2024-03-01
Release date:2025-05-21
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:A hidden cysteine in Fis1 targeted to prevent excessive mitochondrial fission and dysfunction under oxidative stress.
Nat Commun, 16, 2025
367D
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BU of 367d by Molmil
1.2 A STRUCTURE DETERMINATION OF THE D(CG(5-BRU)ACG)2/5-BROMO-9-AMINO-DACA COMPLEX
Descriptor: 5'-D(*CP*GP*(BRU)P*AP*CP*G)-3', 5-BROMO-9-AMINO-N-ETHYL(DIAMINOMETHYL)ACRIDINE-4-CARBOXAMIDE, BROMIDE ION
Authors:Todd, A.K, Adams, A, Thorpe, J.H, Denny, W.A, Cardin, C.J.
Deposit date:1997-12-19
Release date:2003-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Major groove binding and 'DNA-induced' fit in the intercalation of a derivative of the mixed topoisomerase I/II poison N-(2-(dimethlyamino)ethyl)acridine-4-carboxamide (DACA) into DNA: X-ray structure complexed to d(CG(5Br-U)ACG)2 at 1.3-angstrom resolution
J.Med.Chem., 42, 1999
5L9I
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BU of 5l9i by Molmil
Crystal structure of the periplasmic binding protein MotA in complex with DFG from A. tumefaciens B6
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Marty, L, Morera, S.
Deposit date:2016-06-10
Release date:2016-09-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens.
J.Biol.Chem., 291, 2016
6N53
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BU of 6n53 by Molmil
Crystal structure of human uridine-cytidine kinase 2 complexed with 2'-azidouridine monophosphate
Descriptor: 2'-deoxy-2'-triaza-1,2-dien-2-ium-1-yl-uridine-5'-monophosphate, GLYCEROL, MAGNESIUM ION, ...
Authors:Cuthbert, B.J, Nainar, S, Spitale, R.C, Goulding, C.W.
Deposit date:2018-11-21
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:An optimized chemical-genetic method for cell-specific metabolic labeling of RNA.
Nat.Methods, 17, 2020
9S87
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BU of 9s87 by Molmil
Crystal structure of the BRI1 ectodomain from Arabidopsis thaliana in complex with castasterone.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Caregnato, A, Hothorn, M.
Deposit date:2025-08-05
Release date:2025-09-10
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A mechanistic framework for the recognition of chemically diverse brassinosteroids by BRI1-family receptor kinases.
To Be Published
9S8S
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BU of 9s8s by Molmil
Crystal structure of the BRI1 ectodomain from Arabidopsis thaliana in complex with typhasterol.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Caregnato, A, Hothorn, M.
Deposit date:2025-08-05
Release date:2025-09-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A mechanistic framework for the recognition of chemically diverse brassinosteroids by BRI1-family receptor kinases.
To Be Published
9S80
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BU of 9s80 by Molmil
Crystal structure of the BRL3 ectodomain from Arabidopsis thaliana in complex with brassinolide.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hohmann, U, Hothorn, M.
Deposit date:2025-08-05
Release date:2025-09-10
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:A mechanistic framework for the recognition of chemically diverse brassinosteroids by BRI1-family receptor kinases.
To Be Published
6PKU
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BU of 6pku by Molmil
Guinea pig N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase (NAGPA) catalytic domain (C51S C221S) in complex with N-acetyl-alpha-D-glucosamine (alpha-GlcNAc) and mannose 6-phosphate (M6P)
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, 6-O-phosphono-alpha-D-mannopyranose, ...
Authors:Gorelik, A, Illes, K, Nagar, B.
Deposit date:2019-06-29
Release date:2020-02-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Crystal Structure of the Mannose-6-Phosphate Uncovering Enzyme.
Structure, 28, 2020
7OR2
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BU of 7or2 by Molmil
Crystal structure of UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) from Pseudomonas aeruginosa in complex with FAD and a pyrazole derivative (fragment 4)
Descriptor: 5-methyl-1-phenyl-pyrazole-4-carboxylic acid, FLAVIN-ADENINE DINUCLEOTIDE, UDP-N-acetylenolpyruvoylglucosamine reductase
Authors:Acebron-Garcia de Eulate, M, Blundell, T.L, Kim, S.Y, Mendes, V, Abell, C.
Deposit date:2021-06-04
Release date:2021-11-03
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of Novel Inhibitors of Uridine Diphosphate- N -Acetylenolpyruvylglucosamine Reductase (MurB) from Pseudomonas aeruginosa , an Opportunistic Infectious Agent Causing Death in Cystic Fibrosis Patients.
J.Med.Chem., 65, 2022
6MUH
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BU of 6muh by Molmil
Fluoroacetate dehalogenase, room temperature structure solved by serial 1 degree oscillation crystallography
Descriptor: Fluoroacetate dehalogenase
Authors:Finke, A.D, Wierman, J.L, Pare-Labrosse, O, Sarrachini, A, Besaw, J, Mehrabi, P, Gruner, S.M, Miller, R.J.D.
Deposit date:2018-10-23
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Fixed-target serial oscillation crystallography at room temperature.
IUCrJ, 6, 2019
8QFM
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BU of 8qfm by Molmil
Ergothioneine dioxygenase from Thermocatellispora tengchongensis in complex with manganese
Descriptor: 1,2-ETHANEDIOL, Cysteine dioxygenase, DI(HYDROXYETHYL)ETHER, ...
Authors:Vasseur, C.M, Seebeck, F.P.
Deposit date:2023-09-04
Release date:2023-12-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Enzyme-Catalyzed Oxidative Degradation of Ergothioneine.
Angew.Chem.Int.Ed.Engl., 63, 2024
8Y59
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BU of 8y59 by Molmil
Crystal structure of TRIM21 PRYSPRY (D355A) in complex with (S)-hydroxyl-acepromazine.
Descriptor: (1~{S})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol, E3 ubiquitin-protein ligase TRIM21
Authors:Lu, P, Cheng, Y, Xue, L, Ren, X, Huang, N, Han, T.
Deposit date:2024-01-31
Release date:2024-10-09
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Selective degradation of multimeric proteins by TRIM21-based molecular glue and PROTAC degraders.
Cell, 187, 2024
8Y5B
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BU of 8y5b by Molmil
Crystal structure of TRIM21 PRYSPRY (D355A) in complex with (R)-hydroxyl-acepromazine.
Descriptor: (1~{R})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol, E3 ubiquitin-protein ligase TRIM21
Authors:Lu, P, Cheng, Y, Xue, L, Ren, X, Huang, N, Han, T.
Deposit date:2024-01-31
Release date:2024-10-09
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Selective degradation of multimeric proteins by TRIM21-based molecular glue and PROTAC degraders.
Cell, 187, 2024
5WHM
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BU of 5whm by Molmil
Crystal Structure of IclR Family Transcriptional Regulator from Brucella abortus
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, CALCIUM ION, ...
Authors:Kim, Y, Wu, R, Tesar, C, Endres, M, Babnigg, G, Crosson, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2017-07-17
Release date:2017-08-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Molecular control of gene expression byBrucellaBaaR, an IclR-type transcriptional repressor.
J. Biol. Chem., 293, 2018

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