PDB: 47120 resultsInfo pagesStatus searchChemie searchBIRD

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2PZ5	Crystal Structure of FGF Receptor 2 (FGFR2) Kinase Domain Harboring the Pathogenic N549T Mutation Responsible for Pfeiffer Syndrome Descriptor: Fibroblast growth factor receptor 2, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... Authors: Chen, H, Mohammadi, M. Deposit date: 2007-05-17 Release date: 2007-09-25 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A molecular brake in the kinase hinge region regulates the activity of receptor tyrosine kinases. Mol.Cell, 27, 2007
3H06	Crystal structure of the binding domain of the AMPA subunit GluR2 bound to the willardiine antagonist, UBP282 Descriptor: 4-({3-[(2R)-2-amino-2-carboxyethyl]-2,6-dioxo-3,6-dihydropyrimidin-1(2H)-yl}methyl)benzoic acid, Glutamate receptor 2 Authors: Ahmed, A.H, Oswald, R.E. Deposit date: 2009-04-08 Release date: 2009-05-05 Last modified: 2017-08-23 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Mechanisms of antagonism of the GluR2 AMPA receptor: structure and dynamics of the complex of two willardiine antagonists with the glutamate binding domain. Biochemistry, 48, 2009
3AXG	Structure of 6-aminohexanoate-oligomer hydrolase Descriptor: Endotype 6-aminohexanoat-oligomer hydrolase, SODIUM ION Authors: Negoro, S, Shibata, N, Tanaka, Y, Yasuhira, K, Shibata, H, Hashimoto, H, Lee, Y.H, Ohshima, S, Santa, R, Mochiji, K, Goto, Y, Ikegami, T, Nagai, K, Kato, D, Takeo, M, Higuchi, Y. Deposit date: 2011-04-04 Release date: 2011-12-21 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2 Å) Cite: Three-dimensional structure of nylon hydrolase and mechanism of nylon-6 hydrolysis J.Biol.Chem., 287, 2012
3AX7	Bovine Xanthine Oxidase, protease cleaved form Descriptor: 2-HYDROXYBENZOIC ACID, BICARBONATE ION, CALCIUM ION, ... Authors: Ishikita, H, Eger, B.T, Pai, E.F, Okamoto, K, Nishino, T. Deposit date: 2011-03-30 Release date: 2012-02-22 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.34 Å) Cite: Protein conformational gating of enzymatic activity in xanthine oxidoreductase J.Am.Chem.Soc., 134, 2012
2JJN	Structure of closed cytochrome P450 EryK Descriptor: CYTOCHROME P450 113A1, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION Authors: Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B. Deposit date: 2008-04-15 Release date: 2009-07-14 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate. J.Biol.Chem., 284, 2009
3AX9	Bovine xanthine oxidase, protease cleaved form Descriptor: 2-HYDROXYBENZOIC ACID, BICARBONATE ION, CALCIUM ION, ... Authors: Ishikita, H, Eger, B.T, Pai, E.F, Okamoto, K, Nishino, T. Deposit date: 2011-03-31 Release date: 2012-02-22 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Protein conformational gating of enzymatic activity in xanthine oxidoreductase J.Am.Chem.Soc., 134, 2012
2JJO	Structure of cytochrome P450 EryK in complex with its natural substrate erD Descriptor: CYTOCHROME P450 113A1, Erythromycin D, PROTOPORPHYRIN IX CONTAINING FE Authors: Savino, C, Sciara, G, Miele, A.E, Kendrew, S.G, Vallone, B. Deposit date: 2008-04-15 Release date: 2009-07-14 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Investigating the Structural Plasticity of a Cytochrome P450: Three-Dimensional Structures of P450 Eryk and Binding to its Physiological Substrate. J.Biol.Chem., 284, 2009
3AYT	TTHB071 protein from Thermus thermophilus HB8 Descriptor: Putative uncharacterized protein TTHB071, ZINC ION Authors: Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2011-05-17 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.95 Å) Cite: In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress J.Biol.Chem., 286, 2011
7FD6	Crystal structure of SmChiA in complex with 6a Descriptor: 11-methyl-3-(pyridin-3-ylmethyl)-4H-pyrimido[5'',4'':5',6']pyrido[2',3':4,5]pyrimido[1,2-b]pyridine-4,6(3H)-dione, Chitinase A Authors: Xi, J, Qing, Y. Deposit date: 2021-07-16 Release date: 2022-07-20 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Discovery of Conformation Constrained Tetracyclic Compounds as potent Chitinase OfChi-h inhibitor with novel binding mode To Be Published
2Q14	Crystal structure of Phosphohydrolase (BT4208) from Bacteroides thetaiotaomicron VPI-5482 at 2.20 A resolution Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, ... Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2007-05-23 Release date: 2007-06-12 Last modified: 2019-07-24 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Crystal structure of Phosphohydrolase (BT4208) from Bacteroides thetaiotaomicron VPI-5482 at 2.20 A resolution To be published
3HBE	Class IV chitinase structure from Picea abies at 1.55A Descriptor: 2-METHOXYETHANOL, ACETATE ION, Class IV chitinase Chia4-Pa2, ... Authors: Ubhayasekera, W, Mowbray, S.L. Deposit date: 2009-05-04 Release date: 2009-08-11 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.55 Å) Cite: The first crystal structures of a family 19 class IV chitinase: the enzyme from Norway spruce. Plant Mol.Biol., 71, 2009
3AY5	Crystal structure of HHM (human homologue of murine maternal Id-like molecule) Descriptor: Cyclin-D1-binding protein 1 Authors: Seto, A, Ishitani, R, Nureki, O. Deposit date: 2011-04-28 Release date: 2012-03-14 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of a dominant-negative helix-loop-helix transcriptional regulator suggests mechanisms of autoinhibition. Embo J., 31, 2012
7FF4	The crystal structure of Clostridium cellulolyticum LacI family transcriptional regulator Ccel_1438 Descriptor: Transcriptional regulator, LacI family Authors: Zhang, N, Ge, H. Deposit date: 2021-07-22 Release date: 2022-07-27 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.19 Å) Cite: The crystal structure of Clostridium cellulolyticum LacI family transcriptional regulator Ccel_1438 To Be Published
3HBV	PrtC methionine mutants: M226A in-house Descriptor: CALCIUM ION, CHLORIDE ION, Secreted protease C, ... Authors: Oberholzer, A.E, Bumann, M, Hege, T, Russo, S, Baumann, U. Deposit date: 2009-05-05 Release date: 2009-06-30 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Metzincin's canonical methionine is responsible for the structural integrity of the zinc-binding site Biol.Chem., 390, 2009
3AYV	TTHB071 protein from Thermus thermophilus HB8 soaking with ZnCl2 Descriptor: Putative uncharacterized protein TTHB071, ZINC ION Authors: Nakane, S, Wakamatsu, T, Fukui, K, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2011-05-17 Release date: 2011-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.85 Å) Cite: In vivo, in vitro, and x-ray crystallographic analyses suggest the involvement of an uncharacterized triose-phosphate isomerase (TIM) barrel protein in protection against oxidative stress J.Biol.Chem., 286, 2011
2Q7U	Crystal Structure of the F plasmid TraI Relaxase Domain with the Scissile Thymidine Base and Imidodiphosphate Descriptor: IMIDO DIPHOSPHATE, MAGNESIUM ION, Protein traI, ... Authors: Lujan, S.A, Redinbo, M.R. Deposit date: 2007-06-07 Release date: 2008-05-20 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (3 Å) Cite: Disrupting antibiotic resistance propagation by inhibiting the conjugative DNA relaxase. Proc.Natl.Acad.Sci.Usa, 104, 2007
2PGW	Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021 Descriptor: GLYCEROL, Muconate cycloisomerase Authors: Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC) Deposit date: 2007-04-10 Release date: 2007-04-24 Last modified: 2021-02-03 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structure of a putative muconate cycloisomerase from Sinorhizobium meliloti 1021 To be Published
2JK6	Structure of Trypanothione Reductase from Leishmania infantum Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, TRYPANOTHIONE REDUCTASE Authors: Baiocco, P, Colotti, G, Franceschini, S, Ilari, A. Deposit date: 2008-08-21 Release date: 2009-04-28 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.95 Å) Cite: Molecular Basis of Antimony Treatment in Leishmaniasis. J.Med.Chem., 52, 2009
2JM5	Solution Structure of the RGS domain from human RGS18 Descriptor: Regulator of G-protein signaling 18 Authors: Higman, V.A, Leidert, M, Bray, J, Elkins, J, Soundararajan, M, Doyle, D.A, Gileadi, C, Phillips, C, Schoch, G, Yang, X, Brockmann, C, Schmieder, P, Diehl, A, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Oschkinat, H, Ball, L.J, Structural Genomics Consortium (SGC) Deposit date: 2006-10-11 Release date: 2006-10-24 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: Structural diversity in the RGS domain and its interaction with heterotrimeric G protein alpha-subunits. Proc.Natl.Acad.Sci.Usa, 105, 2008
7FJD	Cryo-EM structure of a membrane protein(WT) Descriptor: CHOLESTEROL, T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha chain constant, T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2, ... Authors: Chen, Y, Zhu, Y, Gao, W, Zhang, A, Guo, C, Huang, Z. Deposit date: 2021-08-03 Release date: 2022-07-27 Method: ELECTRON MICROSCOPY (3.2 Å) Cite: Cholesterol inhibits TCR signaling by directly restricting TCR-CD3 core tunnel motility. Mol.Cell, 82, 2022
3GLF	Crystal Structure of the Ecoli Clamp Loader Bound to Primer-Template DNA Descriptor: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, DNA (5'-D(*CP*TP*GP*GP*CP*CP*TP*AP*TP*A)-3'), ... Authors: Simonetta, K.R, Kuriyan, J. Deposit date: 2009-03-12 Release date: 2009-05-26 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.388 Å) Cite: The mechanism of ATP-dependent primer-template recognition by a clamp loader complex. Cell(Cambridge,Mass.), 137, 2009
2Q9F	Crystal structure of human cytochrome P450 46A1 in complex with cholesterol-3-sulphate Descriptor: CHOLEST-5-EN-3-YL HYDROGEN SULFATE, Cytochrome P450 46A1, GLYCEROL, ... Authors: White, M.A, Mast, N.V, Johnson, E.F, Stout, C.D, Pikuleva, I.A. Deposit date: 2007-06-12 Release date: 2008-06-17 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal structures of substrate-bound and substrate-free cytochrome P450 46A1, the principal cholesterol hydroxylase in the brain. Proc.Natl.Acad.Sci.Usa, 105, 2008
7FJE	Cryo-EM structure of a membrane protein(LL) Descriptor: CHOLESTEROL, T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha chain constant, T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2, ... Authors: Chen, Y, Zhu, Y, Gao, W, Zhang, A, Guo, C, Huang, Z. Deposit date: 2021-08-03 Release date: 2022-07-27 Method: ELECTRON MICROSCOPY (3 Å) Cite: Cholesterol inhibits TCR signaling by directly restricting TCR-CD3 core tunnel motility. Mol.Cell, 82, 2022
7FAX	Complex structure of TbLeo1 and LW domain from Trypanosoma brucei Descriptor: TbLW, TbLeo1 peptide Authors: Liao, S, Gao, J, Tu, X. Deposit date: 2021-07-07 Release date: 2022-07-27 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural basis for evolutionarily conserved interactions between TFIIS and Paf1C. Int.J.Biol.Macromol., 253, 2023
7FJF	Cryo-EM structure of a membrane protein(CS) Descriptor: CHOLEST-5-EN-3-YL HYDROGEN SULFATE, T cell receptor alpha variable 12-3,Possible J 11 gene segment,T cell receptor alpha chain constant, T cell receptor beta variable 6-5,M1-specific T cell receptor beta chain,T cell receptor beta constant 2, ... Authors: Chen, Y, Zhu, Y, Gao, W, Zhang, A, Guo, C, Huang, Z. Deposit date: 2021-08-03 Release date: 2022-07-27 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cholesterol inhibits TCR signaling by directly restricting TCR-CD3 core tunnel motility. Mol.Cell, 82, 2022

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