Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2L39
DownloadVisualize
BU of 2l39 by Molmil
Mouse prion protein fragment 121-231 AT 37 C
Descriptor: Major prion protein
Authors:Christen, B, Damberger, F.F, Perez, D.R, Hornemann, S, Wuthrich, K.
Deposit date:2010-09-10
Release date:2011-08-10
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Cellular prion protein conformation and function.
Proc.Natl.Acad.Sci.USA, 108, 2011
2LWG
DownloadVisualize
BU of 2lwg by Molmil
NMR Structure of the Self-Complementary 10 mer DNA Oligonucleotide 5'-GGATATATCC-3'.
Descriptor: DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3')
Authors:Rettig, M, Germann, M.W, Wilson, W, Wang, S.
Deposit date:2012-07-31
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for sequence-dependent induced DNA bending.
Chembiochem, 14, 2013
2LWH
DownloadVisualize
BU of 2lwh by Molmil
NMR Structure of the Self-Complementary 10 mer DNA Duplex 5'-GGATATATCC-3' in Complex with Netropsin
Descriptor: DNA (5'-D(*GP*GP*AP*TP*AP*TP*AP*TP*CP*C)-3'), NETROPSIN
Authors:Rettig, M, Germann, M.W, Wilson, W, Wang, S.
Deposit date:2012-07-31
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for sequence-dependent induced DNA bending.
Chembiochem, 14, 2013
2MI0
DownloadVisualize
BU of 2mi0 by Molmil
NMR structure of the I-V kissing-loop interaction of the Neurospora VS ribozyme
Descriptor: 5'-R(*GP*AP*GP*CP*AP*GP*CP*AP*UP*CP*GP*UP*CP*GP*GP*CP*UP*GP*CP*UP*CP*A)-3', 5'-R(*GP*CP*GP*GP*CP*AP*GP*UP*UP*GP*AP*CP*UP*AP*CP*UP*GP*UP*CP*GP*C)-3'
Authors:Bouchard, P, Legault, P.
Deposit date:2013-12-05
Release date:2014-01-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insights into substrate recognition by the neurospora varkud satellite ribozyme: importance of u-turns at the kissing-loop junction.
Biochemistry, 53, 2014
2M53
DownloadVisualize
BU of 2m53 by Molmil
G-rich VEGF aptamer with LNA modifications
Descriptor: G-rich VEGF aptamer
Authors:Marusic, M, Veedu, R.N, Plavec, J.
Deposit date:2013-02-13
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:G-rich VEGF aptamer with locked and unlocked nucleic acid modifications exhibits a unique G-quadruplex fold.
Nucleic Acids Res., 41, 2013
2MGP
DownloadVisualize
BU of 2mgp by Molmil
Structure of Plasmodium Yoelii Merozoite Surface Protein 1 - C-terminal Domain
Descriptor: Merozoite surface protein 1
Authors:Curd, R.D, Birdsall, B, Kadekoppala, M, Ogun, S, Kelly, G, Holder, A.A.
Deposit date:2013-11-03
Release date:2014-02-12
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The structure of Plasmodium yoelii merozoite surface protein 119, antibody specificity and implications for malaria vaccine design
OPEN BIOLOGY, 4, 2014
2MGR
DownloadVisualize
BU of 2mgr by Molmil
Structure of Plasmodium Yoelii Merozoite Surface Protein 1 - C-terminal Domain, E28K mutant
Descriptor: Merozoite surface protein 1
Authors:Curd, R.D, Birdsall, B, Kadekoppala, M, Ogun, S, Kelly, G, Holder, A.A.
Deposit date:2013-11-04
Release date:2014-02-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The structure of Plasmodium yoelii merozoite surface protein 119, antibody specificity and implications for malaria vaccine design
OPEN BIOLOGY, 4, 2014
2M5N
DownloadVisualize
BU of 2m5n by Molmil
Atomic-resolution structure of a cross-beta protofilament
Descriptor: Transthyretin
Authors:Fitzpatrick, A.W.P, Debelouchina, G.T, Bayro, M.J, Clare, D.K, Caporini, M.A, Bajaj, V.S, Jaroniec, C.P, Wang, L, Ladizhansky, V, Muller, S, MacPhee, C.E, Waudby, C.A, Mott, H.R, de Simone, A, Knowles, T.P.J, Saibil, H.R, Vendruscolo, M, Orlova, E.V, Griffin, R.G, Dobson, C.M.
Deposit date:2013-02-27
Release date:2013-07-17
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic structure and hierarchical assembly of a cross-{beta} amyloid fibril.
Proc.Natl.Acad.Sci.USA, 110, 2013
2LZU
DownloadVisualize
BU of 2lzu by Molmil
Solution structure of LIMD2
Descriptor: LIM domain-containing protein 2, ZINC ION
Authors:Talebzadeh Farooji, M, Peng, H, Rauscher, F.J, Borden, K.K.L, Osborne, M.J.
Deposit date:2012-10-10
Release date:2014-04-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of LIMD2
To be Published
2MGT
DownloadVisualize
BU of 2mgt by Molmil
Zinc induced dimer of the metal binding domain 1-16 of human amyloid beta-peptide with Alzheimer's disease pathogenic English mutation H6R
Descriptor: Amyloid beta A4 protein, ZINC ION
Authors:Polshakov, V, Istrate, A, Kozin, S.
Deposit date:2013-11-06
Release date:2014-11-12
Last modified:2020-01-01
Method:SOLUTION NMR
Cite:Interplay of histidine residues of the Alzheimer's disease A beta peptide governs its Zn-induced oligomerization.
Sci Rep, 6, 2016
2M6N
DownloadVisualize
BU of 2m6n by Molmil
3D solution structure of EMI1 (Early Mitotic Inhibitor 1)
Descriptor: F-box only protein 5, ZINC ION
Authors:Frye, J.J, Brown, N.G, Petzold, G, Watson, E.R, Royappa, G.R, Nourse, A, Jarvis, M, Kriwacki, R.W, Peters, J, Stark, H, Schulman, B.A.
Deposit date:2013-04-06
Release date:2013-05-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Electron microscopy structure of human APC/C(CDH1)-EMI1 reveals multimodal mechanism of E3 ligase shutdown.
Nat.Struct.Mol.Biol., 20, 2013
2MHJ
DownloadVisualize
BU of 2mhj by Molmil
Solution structure of TpsB4 N-terminal POTRA domain from Pseudomonas aeruginosa
Descriptor: TpsB4 protein
Authors:Garnett, J.A, Matthews, S.J.
Deposit date:2013-11-25
Release date:2014-12-24
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure-function analysis reveals that the Pseudomonas aeruginosa Tps4 two-partner secretion system is involved in CupB5 translocation.
Protein Sci., 24, 2015
2M4J
DownloadVisualize
BU of 2m4j by Molmil
40-residue beta-amyloid fibril derived from Alzheimer's disease brain
Descriptor: Amyloid beta A4 protein
Authors:Lu, J, Qiang, W, Meredith, S.C, Yau, W, Schweiters, C.D, Tycko, R.
Deposit date:2013-02-05
Release date:2013-09-25
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Molecular Structure of beta-Amyloid Fibrils in Alzheimer's Disease Brain Tissue.
Cell(Cambridge,Mass.), 154, 2013
1GGT
DownloadVisualize
BU of 1ggt by Molmil
THREE-DIMENSIONAL STRUCTURE OF A TRANSGLUTAMINASE: HUMAN BLOOD COAGULATION FACTOR XIII
Descriptor: COAGULATION FACTOR XIII
Authors:Yee, V.C, Pedersen, L.C, Trong, I.L, Bishop, P.D, Stenkamp, R.E, Teller, D.C.
Deposit date:1994-01-25
Release date:1995-07-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Three-dimensional structure of a transglutaminase: human blood coagulation factor XIII.
Proc.Natl.Acad.Sci.USA, 91, 1994
5KPS
DownloadVisualize
BU of 5kps by Molmil
Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Loveland, A.B, Bah, E, Madireddy, R, Zhang, Y, Brilot, A.F, Grigorieff, N, Korostelev, A.A.
Deposit date:2016-07-05
Release date:2016-09-28
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Ribosome•RelA structures reveal the mechanism of stringent response activation.
Elife, 5, 2016
8XG2
DownloadVisualize
BU of 8xg2 by Molmil
The structure of HLA-A/Pep14
Descriptor: Beta-2-microglobulin, HLA class I heavy chain, Spike protein S1
Authors:Zhang, J.N, Yue, C, Liu, J.
Deposit date:2023-12-14
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Uncommon P1 Anchor-featured Viral T Cell Epitope Preference within HLA-A*2601 and HLA-A*0101 Individuals.
Immunohorizons, 8, 2024
8XES
DownloadVisualize
BU of 8xes by Molmil
The structure of HLA-A/L1-1
Descriptor: Beta-2-microglobulin, HLA class I heavy chain, Major capsid protein L1
Authors:Zhang, J.N, Yue, C, Liu, J.
Deposit date:2023-12-12
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Uncommon P1 Anchor-featured Viral T Cell Epitope Preference within HLA-A*2601 and HLA-A*0101 Individuals.
Immunohorizons, 8, 2024
5LA3
DownloadVisualize
BU of 5la3 by Molmil
[FeFe]-hydrogenase CpI from Clostridium pasteurianum, variant E279A
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, Iron hydrogenase 1, ...
Authors:Duan, J, Esselborn, J, Hofmann, E, Winkler, M, Happe, T.
Deposit date:2016-06-13
Release date:2017-06-21
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Accumulating the hydride state in the catalytic cycle of [FeFe]-hydrogenases.
Nat Commun, 8, 2017
5LB6
DownloadVisualize
BU of 5lb6 by Molmil
HIF prolyl hydroxylase 2 (PHD2/EGLN1) R371H variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/UN9)
Descriptor: Egl nine homolog 1, GLYCEROL, MANGANESE (II) ION, ...
Authors:Chowdhury, R, Schofield, C.J.
Deposit date:2016-06-15
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases.
Nat Commun, 7, 2016
5LBE
DownloadVisualize
BU of 5lbe by Molmil
HIF prolyl hydroxylase 2 (PHD2/EGLN1) G294E variant in complex with Mn(II) and N-[(1-chloro-4-hydroxyisoquinolin-3-yl)carbonyl]glycine (IOX3/FG2216)
Descriptor: BICARBONATE ION, Egl nine homolog 1, MANGANESE (II) ION, ...
Authors:Chowdhury, R, Schofield, C.J.
Deposit date:2016-06-15
Release date:2016-08-31
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.749 Å)
Cite:Structural basis for oxygen degradation domain selectivity of the HIF prolyl hydroxylases.
Nat Commun, 7, 2016
9BC7
DownloadVisualize
BU of 9bc7 by Molmil
HCN1 M305L holo
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Kim, E.D, Nimigean, C.M.
Deposit date:2024-04-08
Release date:2024-07-31
Last modified:2024-08-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Propofol rescues voltage-dependent gating of HCN1 channel epilepsy mutants.
Nature, 2024
5KWJ
DownloadVisualize
BU of 5kwj by Molmil
M.tb Ag85C modified at C209 by amino-ebselen
Descriptor: Diacylglycerol acyltransferase/mycolyltransferase Ag85C, ~{N}-(4-aminophenyl)-2-selanyl-benzamide
Authors:Goins, C.M, Ronning, D.R.
Deposit date:2016-07-18
Release date:2017-03-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Exploring Covalent Allosteric Inhibition of Antigen 85C from Mycobacterium tuberculosis by Ebselen Derivatives.
ACS Infect Dis, 3, 2017
8XI6
DownloadVisualize
BU of 8xi6 by Molmil
SARS-CoV-2 Omicron BQ.1.1 Variant Spike Protein Complexed with MO11 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ishimaru, H, Nishimura, M, Shigematsu, H, Marini, M.I, Hasegawa, N, Takamiya, R, Iwata, S, Mori, Y.
Deposit date:2023-12-19
Release date:2024-04-24
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Epitopes of an antibody that neutralizes a wide range of SARS-CoV-2 variants in a conserved subdomain 1 of the spike protein.
J.Virol., 98, 2024
8XFZ
DownloadVisualize
BU of 8xfz by Molmil
The structure of HLA-A/L1-2
Descriptor: Beta-2-microglobulin, HLA class I heavy chain, Major capsid protein L1
Authors:Zhang, J.N, Yue, C, Liu, J.
Deposit date:2023-12-14
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Uncommon P1 Anchor-featured Viral T Cell Epitope Preference within HLA-A*2601 and HLA-A*0101 Individuals.
Immunohorizons, 8, 2024
8XKE
DownloadVisualize
BU of 8xke by Molmil
The structure of HLA-A/14-3-D
Descriptor: Beta-2-microglobulin, GLU-VAL-ASP-ASN-ALA-THR-ARG-PHE-ALA-SER-VAL-TYR, HLA class I heavy chain
Authors:Zhang, J.N, Yue, C, Liu, J, Sun, Z.Y.
Deposit date:2023-12-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Uncommon P1 Anchor-featured Viral T Cell Epitope Preference within HLA-A*2601 and HLA-A*0101 Individuals.
Immunohorizons, 8, 2024

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon