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7VV6
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BU of 7vv6 by Molmil
Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80 (local)
Descriptor: 2-[4-methoxy-3-[[2-methoxy-3-[[2-methoxy-5-[2-(methylamino)ethyl]phenyl]methyl]-5-[2-(methylamino)ethyl]phenyl]methyl]phenyl]-~{N}-methyl-ethanamine, CHOLESTEROL, Mas-related G-protein coupled receptor member X2
Authors:Li, Y, Yang, F.
Deposit date:2021-11-04
Release date:2021-12-01
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure, function and pharmacology of human itch receptor complexes.
Nature, 600, 2021
1DJ5
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CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE WITH N-HYDROXYGUANIDINE BOUND
Descriptor: CYTOCHROME C PEROXIDASE, N-HYDROXYGUANIDINE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hirst, J, Goodin, D.B.
Deposit date:1999-12-01
Release date:1999-12-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unusual oxidative chemistry of N(omega)-hydroxyarginine and N-hydroxyguanidine catalyzed at an engineered cavity in a heme peroxidase.
J.Biol.Chem., 275, 2000
7VPC
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Neryl diphosphate synthase from Solanum lycopersicum
Descriptor: 1,2-ETHANEDIOL, D-MALATE, Neryl-diphosphate synthase 1
Authors:Imaizumi, R, Misawa, S, Takeshita, K, Sakai, N, Yamamoto, M, Kataoka, K, Nakayama, T, Takahashi, S, Yamashita, S.
Deposit date:2021-10-15
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structure-based engineering of a short-chain cis-prenyltransferase to biosynthesize nonnatural all-cis-polyisoprenoids: molecular mechanisms for primer substrate recognition and ultimate product chain-length determination.
Febs J., 289, 2022
7V2V
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: SULFATE ION, VpsR
Authors:Chakrabortty, T, Sen, U, Chowdhury, S.R.
Deposit date:2021-08-10
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V2B
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BU of 7v2b by Molmil
Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, VpsR
Authors:Chakrabortty, T, Sen, U.
Deposit date:2021-08-08
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
8UN8
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BU of 8un8 by Molmil
Solution conformations of a 12-mer peptide bearing a natural N-hydrophobic triangle
Descriptor: ACE-LEU-ASP-ALA-ALA-LEU-LEU-ALA-ALA-ALA-LYS-ALA-TRP-NH2 peptide
Authors:Mi, T.X, Burgess, K.
Deposit date:2023-10-18
Release date:2024-06-05
Method:SOLUTION NMR
Cite:Bioinformatics leading to conveniently accessible, helix enforcing, bicyclic ASX motif mimics (BAMMs).
Nat Commun, 15, 2024
1CGY
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BU of 1cgy by Molmil
SITE DIRECTED MUTATIONS OF THE ACTIVE SITE RESIDUE TYROSINE 195 OF CYCLODEXTRIN GLYXOSYLTRANSFERASE FROM BACILLUS CIRCULANS STRAIN 251 AFFECTING ACTIVITY AND PRODUCT SPECIFICITY
Descriptor: CALCIUM ION, CYCLOMALTODEXTRIN GLUCANOTRANSFERASE, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Strokopytov, B.V, Dijkstra, B.W.
Deposit date:1994-08-05
Release date:1995-02-07
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Site-directed mutations in tyrosine 195 of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 affect activity and product specificity.
Biochemistry, 34, 1995
1CMK
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BU of 1cmk by Molmil
CRYSTAL STRUCTURES OF THE MYRISTYLATED CATALYTIC SUBUNIT OF CAMP-DEPENDENT PROTEIN KINASE REVEAL OPEN AND CLOSED CONFORMATIONS
Descriptor: IODIDE ION, MYRISTIC ACID, cAMP-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT, ...
Authors:Zheng, J, Knighton, D.R, Xuong, N.-H, Taylor, S.S, Sowadski, J.M, Ten Eyck, L.F.
Deposit date:1993-11-18
Release date:1994-05-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of the myristylated catalytic subunit of cAMP-dependent protein kinase reveal open and closed conformations.
Protein Sci., 2, 1993
1EXG
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BU of 1exg by Molmil
SOLUTION STRUCTURE OF A CELLULOSE BINDING DOMAIN FROM CELLULOMONAS FIMI BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
Descriptor: EXO-1,4-BETA-D-GLYCANASE
Authors:Xu, G.-Y, Ong, E, Gilkes, N.R, Kilburn, D.G, Muhandiram, D.R, Harris-Brandts, M, Carver, J.P, Kay, L.E, Harvey, T.S.
Deposit date:1995-03-14
Release date:1995-06-03
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of a cellulose-binding domain from Cellulomonas fimi by nuclear magnetic resonance spectroscopy.
Biochemistry, 34, 1995
7V4E
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, VpsR
Authors:Chakrabortty, T, Sen, U.
Deposit date:2021-08-12
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V3W
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, VpsR
Authors:Chakrabortty, T, Sen, U, Chowdhury, S.R.
Deposit date:2021-08-11
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
1EXH
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BU of 1exh by Molmil
SOLUTION STRUCTURE OF A CELLULOSE BINDING DOMAIN FROM CELLULOMONAS FIMI BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY
Descriptor: EXO-1,4-BETA-D-GLYCANASE
Authors:Xu, G.-Y, Ong, E, Gilkes, N.R, Kilburn, D.G, Muhandiram, D.R, Harris-Brandts, M, Carver, J.P, Kay, L.E, Harvey, T.S.
Deposit date:1995-03-14
Release date:1995-06-03
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Solution structure of a cellulose-binding domain from Cellulomonas fimi by nuclear magnetic resonance spectroscopy.
Biochemistry, 34, 1995
1DJ1
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BU of 1dj1 by Molmil
CRYSTAL STRUCTURE OF R48A MUTANT OF CYTOCHROME C PEROXIDASE
Descriptor: CYTOCHROME C PEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Hirst, J, Goodin, D.B.
Deposit date:1999-11-30
Release date:1999-12-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Unusual oxidative chemistry of N(omega)-hydroxyarginine and N-hydroxyguanidine catalyzed at an engineered cavity in a heme peroxidase.
J.Biol.Chem., 275, 2000
1GLJ
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BU of 1glj by Molmil
ESCHERICHIA COLI GLYCEROL KINASE MUTANT WITH BOUND ATP ANALOG SHOWING SUBSTANTIAL DOMAIN MOTION
Descriptor: GAMMA-ARSONO-BETA, GAMMA-METHYLENEADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
Authors:Bystrom, C.E, Pettigrew, D.W, Branchaud, B.P, Remington, S.J.
Deposit date:1998-09-03
Release date:1999-05-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of Escherichia coli glycerol kinase variant S58-->W in complex with nonhydrolyzable ATP analogues reveal a putative active conformation of the enzyme as a result of domain motion.
Biochemistry, 38, 1999
5DK4
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BU of 5dk4 by Molmil
Crystal structure analysis of Tryptophanyl-trna synthetase from Bacillus stearothermophilus in complex with indolmycin and Mg*ATP
Descriptor: (5S)-5-[(1R)-1-(1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4(5H)-one, ADENOSINE-5'-TRIPHOSPHATE, GLYCEROL, ...
Authors:Williams, T, Yin, W.Y, Carter Jr, C.W.
Deposit date:2015-09-02
Release date:2015-11-18
Last modified:2019-12-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Selective Inhibition of Bacterial Tryptophanyl-tRNA Synthetases by Indolmycin Is Mechanism-based.
J.Biol.Chem., 291, 2016
2P5T
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BU of 2p5t by Molmil
Molecular and structural characterization of the PezAT chromosomal toxin-antitoxin system of the human pathogen Streptococcus pneumoniae
Descriptor: PezT, Putative transcriptional regulator PezA, fragment of PezA helix-turn-helix motif
Authors:Loll, B, Meinhart, A.
Deposit date:2007-03-16
Release date:2007-05-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Molecular and Structural Characterization of the PezAT Chromosomal Toxin-Antitoxin System of the Human Pathogen Streptococcus pneumoniae.
J.Biol.Chem., 282, 2007
4DE8
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BU of 4de8 by Molmil
LytR-Cps2a-Psr family protein with bound octaprenyl monophosphate lipid
Descriptor: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl dihydrogen phosphate, Cps2A, DI(HYDROXYETHYL)ETHER
Authors:Eberhardt, A, Hoyland, C.N, Vollmer, D.V, Bisle, S, Cleverley, R.M, Johnsborg, O, Havarstein, L.S, Lewis, R.J, Vollmer, W.
Deposit date:2012-01-20
Release date:2012-04-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Attachment of Capsular Polysaccharide to the Cell Wall in Streptococcus pneumoniae.
Microb Drug Resist, 18, 2012
7EV3
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BU of 7ev3 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-10 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-fluoranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
7EV2
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BU of 7ev2 by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-11 and ATP
Descriptor: (5S)-5-[(1R)-1-(4-chloranyl-1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-05-20
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
7ENT
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BU of 7ent by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Y-13 and ATP
Descriptor: (5S)-2-(methylamino)-5-[(1R)-1-(4-methyl-1H-indol-3-yl)ethyl]-1,3-oxazol-4-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-04-19
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
7WVH
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BU of 7wvh by Molmil
Structure of NAD+ glycohydrolase/Streptolysin O complex from Group A streptococcus
Descriptor: NAD+-glycohydrolase, Streptolysin O
Authors:Tsai, W.-J, Wang, S.-Y.
Deposit date:2022-02-10
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural basis underlying the synergism of NADase and SLO during group A Streptococcus infection.
Commun Biol, 6, 2023
7ENS
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BU of 7ens by Molmil
Crystal structure of Mycobacterium tuberculosis tryptophanyl-tRNA synthetase complexed with Indolmycin and ATP
Descriptor: (5S)-5-[(1R)-1-(1H-indol-3-yl)ethyl]-2-(methylamino)-1,3-oxazol-4(5H)-one, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Xu, M, Chen, S.
Deposit date:2021-04-19
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Investigate Natural Product Indolmycin and the Synthetically Improved Analogue Toward Antimycobacterial Agents.
Acs Chem.Biol., 17, 2022
5XXZ
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BU of 5xxz by Molmil
Crystal structure of a serine protease from Streptococcus species
Descriptor: CALCIUM ION, Chemokine protease C, SULFATE ION
Authors:Jobichen, C, Sivaraman, J.
Deposit date:2017-07-05
Release date:2018-08-08
Last modified:2018-09-26
Method:X-RAY DIFFRACTION (3.085 Å)
Cite:Structure of ScpC, a virulence protease fromStreptococcus pyogenes, reveals the functional domains and maturation mechanism.
Biochem. J., 475, 2018
4MER
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BU of 4mer by Molmil
Crystal structure of the novel protein and virulence factor sHIP (Q99XU0) from Streptococcus pyogenes
Descriptor: streptococcal Histidine-rich glycoprotein Interacting Protein
Authors:Wisniewska, M, Happonen, L, Frick, M.-I, Bjorck, L, Streicher, W, Malmstrom, J, Wikstrom, M.
Deposit date:2013-08-27
Release date:2014-05-21
Last modified:2014-07-16
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Functional and Structural Properties of a Novel Protein and Virulence Factor (Protein sHIP) in Streptococcus pyogenes.
J.Biol.Chem., 289, 2014
4MLS
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BU of 4mls by Molmil
Crystal structure of the SpyTag and SpyCatcher-deltaN1 complex
Descriptor: Fibronectin binding protein, SpyTag
Authors:Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M.
Deposit date:2013-09-06
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag.
J.Mol.Biol., 426, 2014

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