PDB: 19129 resultsInfo pagesStatus searchChemie searchBIRD

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2Z5I	Crystal structure of the head-to-tail junction of tropomyosin Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, MAGNESIUM ION, Tropomyosin alpha-1 chain and General control protein GCN4 Authors: Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T. Deposit date: 2007-07-12 Release date: 2008-04-22 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T Proc.Natl.Acad.Sci.USA, 105, 2008
2Z5H	Crystal structure of the head-to-tail junction of tropomyosin complexed with a fragment of TnT Descriptor: General control protein GCN4 and Tropomyosin alpha-1 chain, Tropomyosin alpha-1 chain and General control protein GCN4, Troponin T, ... Authors: Murakami, K, Nozawa, K, Tomii, K, Kudou, N, Igarashi, N, Shirakihara, Y, Wakatsuki, S, Stewart, M, Yasunaga, T, Wakabayashi, T. Deposit date: 2007-07-12 Release date: 2008-04-22 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.89 Å) Cite: Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T Proc.Natl.Acad.Sci.USA, 105, 2008
2K33	Solution structure of an N-glycosylated protein using in vitro glycosylation Descriptor: 2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-[beta-D-glucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)-2,4-bisacetamido-2,4,6-trideoxy-beta-D-glucopyranose, AcrA Authors: Slynko, V, Schubert, M, Numao, S, Kowarik, M, Aebi, M, Allain, F.H.-T. Deposit date: 2008-04-18 Release date: 2009-02-03 Last modified: 2021-10-20 Method: SOLUTION NMR Cite: NMR structure determination of a segmentally labeled glycoprotein using in vitro glycosylation. J.Am.Chem.Soc., 131, 2009
1JIM	STEREOSPECIFIC REACTION OF 3-METHOXY-4-CHLORO-7-AMINOISOCOUMARIN WITH CRYSTALLINE PORCINE PANCREATIC ELASTASE Descriptor: METHYL(2-ACETOXY-2-(2-CARBOXY-4-AMINO-PHENYL))ACETATE, PORCINE PANCREATIC ELASTASE, SULFATE ION Authors: Meyer, E. Deposit date: 1993-03-19 Release date: 1994-01-31 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Stereospecific Reaction of 3-Methoxy-4-Chloro-7-Aminoisocoumarin with Crystalline Porcine Pancreatic Elastase J.Am.Chem.Soc., 107, 1985
3FC3	Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I Descriptor: 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3', 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3', Restriction endonuclease Hpy99I, ... Authors: Sokolowska, M, Czapinska, H, Bochtler, M. Deposit date: 2008-11-21 Release date: 2009-03-31 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystal structure of the beta beta alpha-Me type II restriction endonuclease Hpy99I with target DNA. Nucleic Acids Res., 37, 2009
3GOX	Crystal structure of the beta-beta-alpha-Me type II restriction endonuclease Hpy99I in the absence of EDTA Descriptor: 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3', 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3', PENTAETHYLENE GLYCOL, ... Authors: Sokolowska, M, Czapinska, H, Bochtler, M. Deposit date: 2009-03-20 Release date: 2009-04-28 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Crystal structure of the beta beta alpha-Me type II restriction endonuclease Hpy99I with target DNA. Nucleic Acids Res., 37, 2009
1A26	THE CATALYTIC FRAGMENT OF POLY(ADP-RIBOSE) POLYMERASE COMPLEXED WITH CARBA-NAD Descriptor: CARBA-NICOTINAMIDE-ADENINE-DINUCLEOTIDE, POLY (ADP-RIBOSE) POLYMERASE Authors: Ruf, A, Schulz, G.E. Deposit date: 1998-01-16 Release date: 1998-05-27 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.25 Å) Cite: The mechanism of the elongation and branching reaction of poly(ADP-ribose) polymerase as derived from crystal structures and mutagenesis. J.Mol.Biol., 278, 1998
7KWN	Dihydrodipicolinate synthase from C. jejuni with pyruvate bound to the active site in C2221 space group Descriptor: 1,2-ETHANEDIOL, 4-hydroxy-tetrahydrodipicolinate synthase, ACETATE ION, ... Authors: Saran, S, Sanders, D.A.R. Deposit date: 2020-12-01 Release date: 2021-12-08 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.24 Å) Cite: B-FACTOR ANALYSIS SUGGEST THAT L-LYSINE AND R, R-BISLYSINE ALLOSTERICALLY INHIBIT Cj.DHDPS ENZYME BY DECREASING PROTEIN DYNAMICS. To Be Published
2OUE	Crystal structure of a junctionless all-RNA hairpin ribozyme at 2.05 angstroms resolution Descriptor: COBALT HEXAMMINE(III), Loop A ribozyme strand, Loop B S-turn strand, ... Authors: Wedekind, J.E. Deposit date: 2007-02-10 Release date: 2007-03-06 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Water in the Active Site of an All-RNA Hairpin Ribozyme and Effects of Gua8 Base Variants on the Geometry of Phosphoryl Transfer. Biochemistry, 45, 2006
7MZG	SARS-CoV-2 receptor binding domain bound to Fab PDI 42 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, PDI 42 heavy chain, ... Authors: Pymm, P, Chan, L.J, Dietrich, M.H, Tan, L.L, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZK	SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 96 Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, ... Authors: Pymm, P, Dietrich, M.H, Tan, L.L, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.25 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZJ	SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 93 Descriptor: GLYCEROL, PDI 93 heavy chain, PDI 93 light chain, ... Authors: Pymm, P, Dietrich, M.H, Tan, L.L, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZH	SARS-CoV-2 receptor binding domain bound to Fab WCSL 119 Descriptor: Spike protein S1, WCSL 119 heavy chain, WCSL 119 light chain, ... Authors: Pymm, P, Tan, L.L, Dietrich, M.H, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7N8Y	Oxidized PheRS G318W from Salmonella enterica serovar Typhimurium Descriptor: Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit Authors: Srinivas, P, Dunham, C.M. Deposit date: 2021-06-16 Release date: 2021-10-06 Last modified: 2024-06-05 Method: ELECTRON MICROSCOPY (3.65 Å) Cite: Oxidation alters the architecture of the phenylalanyl-tRNA synthetase editing domain to confer hyperaccuracy. Nucleic Acids Res., 49, 2021
7MZI	SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 Descriptor: GLYCEROL, Spike protein S1, TETRAETHYLENE GLYCOL, ... Authors: Pymm, P, Tan, L.L, Dietrich, M.H, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZL	SARS-CoV-2 receptor binding domain bound to Fab PDI 210 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PDI 210 heavy chain, PDI 210 light chain, ... Authors: Pymm, P, Chan, L.J, Dietrich, M.H, Tan, L.L, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.7 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZN	SARS-CoV-2 receptor binding domain bound to Fab PDI 231 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, PDI 231 heavy chain, PDI 231 light chain, ... Authors: Pymm, P, Tan, L.L, Dietrich, M.H, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.1 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZF	SARS-CoV-2 receptor binding domain bound to Fab PDI 37 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... Authors: Pymm, P, Chan, L.J, Dietrich, M.H, Tan, L.L, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.493 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7MZM	SARS-CoV-2 receptor binding domain bound to Fab PDI 215 Descriptor: ISOPROPYL ALCOHOL, PDI 215 heavy chain, PDI 215 light chain, ... Authors: Pymm, P, Dietrich, M.H, Tan, L.L, Chan, L.J, Tham, W.H. Deposit date: 2021-05-24 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Landscape of human antibody recognition of the SARS-CoV-2 receptor binding domain. Cell Rep, 37, 2021
7N41	Crystal structure of TagA with UDP-ManNAc Descriptor: (2R,3S,4R,5S,6R)-3-acetamido-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name), N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase Authors: Martinez, O.E, Cascio, D, Clubb, R.T. Deposit date: 2021-06-03 Release date: 2021-12-29 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (3.3 Å) Cite: Insight into the molecular basis of substrate recognition by the wall teichoic acid glycosyltransferase TagA. J.Biol.Chem., 298, 2021
7P3S	Crystal structure of Schistosoma mansoni HDAC8 complexed with a benzohydroxamate inhibitor 12 Descriptor: GLYCEROL, Histone deacetylase, POTASSIUM ION, ... Authors: Shaik, T.B, Romier, C. Deposit date: 2021-07-08 Release date: 2021-09-15 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.546 Å) Cite: Synthesis, structure-activity relationships, cocrystallization and cellular characterization of novel smHDAC8 inhibitors for the treatment of schistosomiasis. Eur.J.Med.Chem., 225, 2021
1ATV	HAIRPIN WITH AGAA TETRALOOP, NMR, 4 STRUCTURES Descriptor: RNA (5'-R(*GP*GP*GP*AP*CP*CP*AP*GP*AP*AP*GP*GP*UP*CP*CP*CP*G)-3') Authors: Kang, H. Deposit date: 1997-08-14 Release date: 1998-02-25 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Primary Sequence at the Junction of Stem and Loop in RNA Hairpins Affects the Three-Dimensional Conformation in Solution To be Published
7OZH	PMCA-amplified alpha-synuclein fibril polymorph, Multiple System Atrophy patient-derived seeds Descriptor: Alpha-synuclein Authors: Frieg, B, Geraets, J.A, Schroeder, G.F. Deposit date: 2021-06-28 Release date: 2022-07-13 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.02 Å) Cite: alpha-synuclein polymorphism determines oligodendroglial dysfunction To Be Published
7OZG	PMCA-amplified alpha-synuclein fibril polymorph, Parkinson's Disease patient-derived seeds Descriptor: Alpha-synuclein Authors: Frieg, B, Geraets, J.A, Schroeder, G.F. Deposit date: 2021-06-28 Release date: 2022-07-13 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.3 Å) Cite: alpha-synuclein polymorphism determines oligodendroglial dysfunction To Be Published
3ICD	STRUCTURE OF A BACTERIAL ENZYME REGULATED BY PHOSPHORYLATION, ISOCITRATE DEHYDROGENASE Descriptor: ISOCITRATE DEHYDROGENASE Authors: Hurley, J.H, Thorsness, P.E, Ramalingam, V, Helmers, N.H, Koshlandjunior, D.E, Stroud, R.M. Deposit date: 1989-12-28 Release date: 1991-01-15 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of a bacterial enzyme regulated by phosphorylation, isocitrate dehydrogenase. Proc.Natl.Acad.Sci.USA, 86, 1989

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