Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 318 results

8SSQ
DownloadVisualize
BU of 8ssq by Molmil
ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 35mer DNA 35-4
Descriptor: DNA (35-MER) Strand 2, DNA (35-MER) Strand I, SODIUM ION, ...
Authors:Horton, J.R, Yang, J, Cheng, X.
Deposit date:2023-05-08
Release date:2023-08-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.12 Å)
Cite:Structures of CTCF-DNA complexes including all 11 zinc fingers.
Nucleic Acids Res., 51, 2023
8SSR
DownloadVisualize
BU of 8ssr by Molmil
ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 35mer DNA 35-20
Descriptor: DNA (35-MER) Strand I, DNA (35-MER) Strand II, SODIUM ION, ...
Authors:Horton, J.R, Yang, J, Cheng, X.
Deposit date:2023-05-08
Release date:2023-08-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.14 Å)
Cite:Structures of CTCF-DNA complexes including all 11 zinc fingers.
Nucleic Acids Res., 51, 2023
1VA3
DownloadVisualize
BU of 1va3 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3)
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
Deposit date:2004-02-07
Release date:2005-02-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1VA2
DownloadVisualize
BU of 1va2 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2)
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
Deposit date:2004-02-07
Release date:2005-02-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1X5W
DownloadVisualize
BU of 1x5w by Molmil
Solution structure of the C2H2 type zinc-binding domain of human zinc finger protein 64, isoforms 1 and 2
Descriptor: ZINC ION, Zinc finger protein 64, isoforms 1
Authors:Yoneyama, M, Koshiba, S, Tochio, N, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the C2H2 type zinc-binding domain of human zinc finger protein 64, isoforms 1 and 2
To be Published
1X6H
DownloadVisualize
BU of 1x6h by Molmil
Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
Descriptor: Transcriptional repressor CTCF, ZINC ION
Authors:Sato, M, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
To be Published
1UBD
DownloadVisualize
BU of 1ubd by Molmil
CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT
Descriptor: DNA (5'-D(*AP*GP*GP*GP*TP*CP*TP*CP*CP*AP*TP*TP*TP*TP*GP*AP*A P*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*TP*CP*AP*AP*AP*AP*TP*GP*GP*AP*GP*AP*C P*CP*CP*T)-3'), PROTEIN (YY1 ZINC FINGER DOMAIN), ...
Authors:Houbaviy, H.B, Usheva, A, Shenk, T, Burley, S.K.
Deposit date:1996-10-04
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cocrystal structure of YY1 bound to the adeno-associated virus P5 initiator.
Proc.Natl.Acad.Sci.USA, 93, 1996
1U85
DownloadVisualize
BU of 1u85 by Molmil
ARG326-TRP mutant of the third zinc finger of BKLF
Descriptor: Kruppel-like factor 3, ZINC ION
Authors:Cram, E.D, Mackay, J.P, Matthews, J.M.
Deposit date:2004-08-05
Release date:2005-08-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of tryptophan-containing CCHH zinc finger mutants
To be Published
1X6E
DownloadVisualize
BU of 1x6e by Molmil
Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
Descriptor: ZINC ION, Zinc finger protein 24
Authors:Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
1XF7
DownloadVisualize
BU of 1xf7 by Molmil
High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
Descriptor: Wilms' Tumor Protein, ZINC ION
Authors:Lachenmann, M.J, Ladbury, J.E, Dong, J, Huang, K, Carey, P, Weiss, M.A.
Deposit date:2004-09-14
Release date:2004-12-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Why zinc fingers prefer zinc: ligand-field symmetry and the hidden thermodynamics of metal ion selectivity
Biochemistry, 43, 2004
1TF3
DownloadVisualize
BU of 1tf3 by Molmil
TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
Descriptor: 5S RNA GENE, TRANSCRIPTION FACTOR IIIA, ZINC ION
Authors:Foster, M.P, Wuttke, D.S, Radhakrishnan, I, Case, D.A, Gottesfeld, J.M, Wright, P.E.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA.
Nat.Struct.Biol., 4, 1997
1BBO
DownloadVisualize
BU of 1bbo by Molmil
HIGH-RESOLUTION SOLUTION STRUCTURE OF THE DOUBLE CYS2*HIS2 ZINC FINGER FROM THE HUMAN ENHANCER BINDING PROTEIN MBP-1
Descriptor: HUMAN ENHANCER-BINDING PROTEIN MBP-1, ZINC ION
Authors:Clore, G.M, Omichinski, J.G, Gronenborn, A.M.
Deposit date:1992-05-01
Release date:1993-10-31
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:High-resolution solution structure of the double Cys2His2 zinc finger from the human enhancer binding protein MBP-1.
Biochemistry, 31, 1992
1A1L
DownloadVisualize
BU of 1a1l by Molmil
ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (ZIF268 ZINC FINGER PEPTIDE), ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1G
DownloadVisualize
BU of 1a1g by Molmil
DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), DSNR ZINC FINGER PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1K
DownloadVisualize
BU of 1a1k by Molmil
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3'), RADR ZIF268 VARIANT, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1AAY
DownloadVisualize
BU of 1aay by Molmil
ZIF268 ZINC FINGER-DNA COMPLEX
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (ZIF268 ZINC FINGER PEPTIDE), ...
Authors:Elrod-Erickson, M, Rould, M.A, Pabo, C.O.
Deposit date:1997-01-18
Release date:1997-04-21
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Zif268 protein-DNA complex refined at 1.6 A: a model system for understanding zinc finger-DNA interactions.
Structure, 4, 1996
1ARE
DownloadVisualize
BU of 1are by Molmil
STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS: IMPLICATIONS FOR DNA BINDING
Descriptor: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
Authors:Hoffman, R.C, Xu, R.X, Horvath, S.J, Herriott, J.R, Klevit, R.E.
Deposit date:1993-10-01
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Structures of DNA-binding mutant zinc finger domains: implications for DNA binding.
Protein Sci., 2, 1993
1ARD
DownloadVisualize
BU of 1ard by Molmil
STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS: IMPLICATIONS FOR DNA BINDING
Descriptor: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
Authors:Hoffman, R.C, Xu, R.X, Horvath, S.J, Herriott, J.R, Klevit, R.E.
Deposit date:1993-10-01
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Structures of DNA-binding mutant zinc finger domains: implications for DNA binding.
Protein Sci., 2, 1993
1A1F
DownloadVisualize
BU of 1a1f by Molmil
DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3'), THREE-FINGER ZIF268 PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1J
DownloadVisualize
BU of 1a1j by Molmil
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE), ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1ARF
DownloadVisualize
BU of 1arf by Molmil
STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS: IMPLICATIONS FOR DNA BINDING
Descriptor: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
Authors:Hoffman, R.C, Xu, R.X, Horvath, S.J, Herriott, J.R, Klevit, R.E.
Deposit date:1993-10-01
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Structures of DNA-binding mutant zinc finger domains: implications for DNA binding.
Protein Sci., 2, 1993
1A1H
DownloadVisualize
BU of 1a1h by Molmil
QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), QGSR ZINC FINGER PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1I
DownloadVisualize
BU of 1a1i by Molmil
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), RADR ZIF268 ZINC FINGER PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-17
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
2LCE
DownloadVisualize
BU of 2lce by Molmil
Chemical shift assignment of Hr4436B from Homo Sapiens, Northeast Structural Genomics Consortium
Descriptor: B-cell lymphoma 6 protein, ZINC ION
Authors:Lee, H, Shastry, R, Ciccosanti, C, Janjua, H, Acton, T.B, Xiao, R, Everett, J.K, Montelione, G.T, Prestegard, J.H, Northeast Structural Genomics Consortium (NESG)
Deposit date:2011-04-28
Release date:2011-05-18
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of Hr4436B.
To be Published
2LV2
DownloadVisualize
BU of 2lv2 by Molmil
Solution NMR structure of C2H2-type Zinc-fingers 4 and 5 from human Insulinoma-associated protein 1 (fragment 424-497), Northeast Structural Genomics Consortium Target HR7614B
Descriptor: Insulinoma-associated protein 1, ZINC ION
Authors:Yang, Y, Ramelot, T.A, Cort, J.R, Shastry, R, Kohan, E, Janjua, H, Xiao, R, Acton, T, Everett, J.K, Montelione, G.T, Kennedy, M.A, Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-27
Release date:2012-10-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution NMR structure of C2H2-type Zinc-fingers 4 and 5 from human Insulinoma-associated protein 1 (fragment 424-497), Northeast Structural Genomics Consortium Target HR7614B (CASP Target)
To be Published

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon