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PDB: 1328 results

8OSM
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BU of 8osm by Molmil
GTPASE HRAS IN COMPLEX WITH ZN-CYCLEN AT 200 MPA PRESSURE
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Colloc'h, N, Girard, E, Prange, T, Kalbitzer, H.R.
Deposit date:2023-04-19
Release date:2024-05-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:High pressure promotes binding of the allosteric inhibitor Zn2+-cyclen in crystals of activated H-Ras.
Chemistry, 2024
8IJ9
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BU of 8ij9 by Molmil
Crystal structure of the ELKS1/Rab6B complex
Descriptor: ELKS/Rab6-interacting/CAST family member 1, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Jin, G, Wei, Z.
Deposit date:2023-02-26
Release date:2023-06-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structural basis of ELKS/Rab6B interaction and its role in vesicle capturing enhanced by liquid-liquid phase separation.
J.Biol.Chem., 299, 2023
421P
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BU of 421p by Molmil
THREE-DIMENSIONAL STRUCTURES OF H-RAS P21 MUTANTS: MOLECULAR BASIS FOR THEIR INABILITY TO FUNCTION AS SIGNAL SWITCH MOLECULES
Descriptor: H-RAS P21 PROTEIN, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Krengel, U, John, J, Scherer, A, Kabsch, W, Wittinghofer, A, Pai, E.F.
Deposit date:1991-06-06
Release date:1994-01-31
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structures of H-ras p21 mutants: molecular basis for their inability to function as signal switch molecules.
Cell(Cambridge,Mass.), 62, 1990
3X1Y
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BU of 3x1y by Molmil
Ras-related protein Rap1B(L9V) with GppNHp
Descriptor: CADMIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
Deposit date:2014-12-02
Release date:2015-06-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.168 Å)
Cite:The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1W
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BU of 3x1w by Molmil
Ras-related protein Rap1B with GDP
Descriptor: CADMIUM ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Noguchi, H, Ikegami, T, Akashi, S, Park, S.Y, Tame, J.R.H, Unzai, S.
Deposit date:2014-12-02
Release date:2015-06-03
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
4AII
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BU of 4aii by Molmil
Crystal structure of the rat REM2 GTPase - G domain bound to GDP
Descriptor: GTP-BINDING PROTEIN REM 2, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Reymond, P, Coquard, A, Chenon, M, Zeghouf, M, El Marjou, A, Thompson, A, Menetrey, J.
Deposit date:2012-02-10
Release date:2012-06-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Structure of the Gdp-Bound G Domain of the Rgk Protein Rem2.
Acta Crystallogr.,Sect.F, 68, 2012
3X1X
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BU of 3x1x by Molmil
Ras-related protein Rap1B with GppNHp
Descriptor: CADMIUM ION, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
Deposit date:2014-12-02
Release date:2015-06-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1 Å)
Cite:The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3X1Z
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BU of 3x1z by Molmil
Ras-related protein Rap1B(T65A) with GppNHp
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Noguchi, H, Ikegami, T, Park, S.Y, Tame, J.R.H, Unzai, S.
Deposit date:2014-12-02
Release date:2015-06-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:The structure and conformational switching of Rap1B
Biochem.Biophys.Res.Commun., 462, 2015
3V4F
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BU of 3v4f by Molmil
H-Ras PEG 400/CaCl2, ordered off
Descriptor: (2R,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, CALCIUM ION, GTPase HRas, ...
Authors:Holzapfel, G, Mattos, C.
Deposit date:2011-12-14
Release date:2012-08-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.391 Å)
Cite:Shift in the Equilibrium between On and Off States of the Allosteric Switch in Ras-GppNHp Affected by Small Molecules and Bulk Solvent Composition.
Biochemistry, 51, 2012
7WZA
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BU of 7wza by Molmil
An open conformation Form 1 of switch II for RhoA
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA
Authors:Jiang, H, Luo, C.
Deposit date:2022-02-17
Release date:2023-02-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.50028777 Å)
Cite:A RhoA structure with switch II flipped outward revealed the conformational dynamics of switch II region.
J.Struct.Biol., 215, 2023
7WZC
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BU of 7wzc by Molmil
An open conformation Form2 of switch II for RhoA GDP-bound state
Descriptor: GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Jiang, H, Luo, C.
Deposit date:2022-02-17
Release date:2023-02-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79944921 Å)
Cite:A RhoA structure with switch II flipped outward revealed the conformational dynamics of switch II region.
J.Struct.Biol., 215, 2023
7XKJ
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BU of 7xkj by Molmil
Kras-G12D-GDP-MRTX1133 by FIB-MicroED
Descriptor: 4-(4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-3-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-7-yl)-5-ethynyl-6-fluoronaphthalen-2-ol, GUANOSINE-5'-DIPHOSPHATE, KRAS proto-oncogene, ...
Authors:Li, X.M.
Deposit date:2022-04-19
Release date:2023-08-02
Last modified:2023-08-16
Method:ELECTRON CRYSTALLOGRAPHY (3 Å)
Cite:Kras-G12D-GDP-MRTX1133 by FIB-MicroED
To Be Published
7YCE
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BU of 7yce by Molmil
KRas G12C in complex with Compound 7b
Descriptor: 1-[7-[6-chloranyl-2-(1-ethylpiperidin-4-yl)oxy-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Amano, Y.
Deposit date:2022-07-01
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery and biological evaluation of 1-{2,7-diazaspiro[3.5]nonan-2-yl}prop-2-en-1-one derivatives as covalent inhibitors of KRAS G12C with favorable metabolic stability and anti-tumor activity.
Bioorg.Med.Chem., 71, 2022
7YCC
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BU of 7ycc by Molmil
KRas G12C in complex with Compound 5c
Descriptor: 1-[7-[6-chloranyl-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)-2-[(1-methylpiperidin-4-yl)amino]quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Amano, Y.
Deposit date:2022-07-01
Release date:2022-08-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Discovery and biological evaluation of 1-{2,7-diazaspiro[3.5]nonan-2-yl}prop-2-en-1-one derivatives as covalent inhibitors of KRAS G12C with favorable metabolic stability and anti-tumor activity.
Bioorg.Med.Chem., 71, 2022
7XQV
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BU of 7xqv by Molmil
The complex of nanobody Rh57 binding to GTP-bound RhoA active form
Descriptor: ALANINE, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Zhang, Y.R, Liu, R, Ding, Y.
Deposit date:2022-05-09
Release date:2022-07-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Structural insights into the binding of nanobody Rh57 to active RhoA-GTP.
Biochem.Biophys.Res.Commun., 616, 2022
7VV9
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BU of 7vv9 by Molmil
Crystal Structure of HRas(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Zheng, Y.Y, Zhou, C.
Deposit date:2021-11-05
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into Ras regulation by SIN1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VVG
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BU of 7vvg by Molmil
Crystal Structure of HRasG12V(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Zheng, Y.Y, Zhou, C.
Deposit date:2021-11-06
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into Ras regulation by SIN1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VV8
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BU of 7vv8 by Molmil
Crystal Structure of HRasQ61L(GMPPNP-bound) in complex with the Ras-binding domain(RBD) of SIN1
Descriptor: GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
Authors:Zheng, Y.Y, Zhou, C.
Deposit date:2021-11-04
Release date:2022-05-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into Ras regulation by SIN1.
Proc.Natl.Acad.Sci.USA, 119, 2022
7Y4A
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BU of 7y4a by Molmil
Crystal structure of human ELMO1 RBD-RhoG complex
Descriptor: Engulfment and cell motility protein 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Tsuda, K, Kukimoto-Niino, M, Shirouzu, M.
Deposit date:2022-06-14
Release date:2023-03-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Targeting Ras-binding domain of ELMO1 by computational nanobody design.
Commun Biol, 6, 2023
7W5R
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BU of 7w5r by Molmil
KRAS G12V and peptide complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, LEU-TYR-ASP-VAL-ALA, ...
Authors:Kim, H.J, Han, C.W, Jang, S.B.
Deposit date:2021-11-30
Release date:2022-12-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.87 Å)
Cite:Structural basis of the oncogenic KRAS mutant and GJ101 complex.
Biochem.Biophys.Res.Commun., 641, 2023
6JIK
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BU of 6jik by Molmil
Aspergillus fumigatus Rho1 GsGTP
Descriptor: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE, MAGNESIUM ION, Rho GTPase Rho1
Authors:Bartual, S.G, Van Aalten, D.M.F.
Deposit date:2019-02-22
Release date:2020-09-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Aspergillus fumigatus Rho1 gSGTP complex
To Be Published
6IY1
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BU of 6iy1 by Molmil
Structure of human Ras-related protein Rab11
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-11A
Authors:Ma, P, Li, S, Li, J.
Deposit date:2018-12-12
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Structure of human Ras-related protein Rab11
To Be Published
6H46
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BU of 6h46 by Molmil
Human KRAS in complex with darpin K13
Descriptor: GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, SULFATE ION, ...
Authors:Debreczeni, J.E, Bery, N, Legg, S, Breed, J, Embrey, K, Stubbs, C, Kolasinska-Zwierz, P, Barrett, N, Marwood, R, Watson, J, Tart, J, Overman, R, Miller, A, Phillips, C, Minter, R, Rabbitts, T.H.
Deposit date:2018-07-20
Release date:2019-04-24
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:KRAS-specific inhibition using a DARPin binding to a site in the allosteric lobe.
Nat Commun, 10, 2019
6HXU
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BU of 6hxu by Molmil
Crystal structure of Human RHOB Q63L in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Rho-related GTP-binding protein RhoB
Authors:Soulie, S, Gence, R, Cabantous, S, Lajoie-Mazenc, I, Favre, G, Pedelacq, J.D.
Deposit date:2018-10-18
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A Targeted Protein Degradation Cell-Based Screening for Nanobodies Selective toward the Cellular RHOB GTP-Bound Conformation.
Cell Chem Biol, 26, 2019
6HDU
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BU of 6hdu by Molmil
Crystal structure of human Rab38 in complex with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Ras-related protein Rab-38
Authors:McGrath, E, Waschbusch, D, Khan, A.R.
Deposit date:2018-08-19
Release date:2019-08-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.793 Å)
Cite:LRRK2 binds to the Rab32 subfamily in a GTP-dependent mannerviaits armadillo domain.
Small GTPases, 2019

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