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PDB: 257 results

1UPF
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BU of 1upf by Molmil
STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V BOUND TO THE DRUG 5-FLUOROURACIL
Descriptor: 5-FLUOROURACIL, SULFATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE
Authors:Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
Deposit date:1998-06-17
Release date:1999-06-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
1ZX4
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BU of 1zx4 by Molmil
Structure of ParB bound to DNA
Descriptor: CITRIC ACID, Plasmid Partition par B protein, parS-small DNA centromere site
Authors:Schumacher, M.A, Funnell, B.E.
Deposit date:2005-06-06
Release date:2005-11-29
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Structures of ParB bound to DNA reveal mechanism of partition complex formation.
Nature, 438, 2005
2Q2K
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BU of 2q2k by Molmil
Structure of nucleic-acid binding protein
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*AP*GP*TP*AP*TP*AP*(5IU)P*AP*CP*(5IU)P*AP*GP*TP*AP*TP*AP*TP*AP*CP*T)-3'), Hypothetical protein
Authors:Schumacher, M.A, Glover, T, Firth, N.
Deposit date:2007-05-28
Release date:2008-02-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Segrosome structure revealed by a complex of ParR with centromere DNA.
Nature, 450, 2007
1UPU
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STRUCTURE OF THE URACIL PHOSPHORIBOSYLTRANSFERASE, MUTANT C128V, BOUND TO PRODUCT URIDINE-1-MONOPHOSPHATE (UMP)
Descriptor: PHOSPHATE ION, URACIL PHOSPHORIBOSYLTRANSFERASE, URIDINE-5'-MONOPHOSPHATE
Authors:Schumacher, M.A, Carter, D, Scott, D, Roos, D, Ullman, B, Brennan, R.G.
Deposit date:1998-04-16
Release date:1999-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of Toxoplasma gondii uracil phosphoribosyltransferase reveal the atomic basis of pyrimidine discrimination and prodrug binding.
EMBO J., 17, 1998
1ZVV
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BU of 1zvv by Molmil
Crystal structure of a ccpa-crh-dna complex
Descriptor: DNA recognition strand CRE, Glucose-resistance amylase regulator, HPr-like protein crh, ...
Authors:Schumacher, M.A, Brennan, R.G, Hillen, W, Seidel, G.
Deposit date:2005-06-02
Release date:2006-02-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Phosphoprotein Crh-Ser46-P displays altered binding to CcpA to effect carbon catabolite regulation.
J.Biol.Chem., 281, 2006
5U1J
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BU of 5u1j by Molmil
Structure of pNOB8 ParA bound to nonspecific DNA
Descriptor: DNA (5'-D(*CP*GP*TP*GP*TP*AP*AP*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*A)-3'), DNA (5'-D(*TP*GP*AP*CP*GP*CP*CP*GP*GP*CP*GP*TP*CP*AP*TP*GP*AP*CP*AP*CP*G)-3'), PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Schumacher, M.A.
Deposit date:2016-11-28
Release date:2017-04-19
Last modified:2024-09-25
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structures of partition protein ParA with nonspecific DNA and ParB effector reveal molecular insights into principles governing Walker-box DNA segregation.
Genes Dev., 31, 2017
5U1G
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BU of 5u1g by Molmil
Structure of TP228 ParA-AMPPNP-ParB complex
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ParA, TP228 ParB fragment
Authors:Schumacher, M.A.
Deposit date:2016-11-28
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:Structures of partition protein ParA with nonspecific DNA and ParB effector reveal molecular insights into principles governing Walker-box DNA segregation.
Genes Dev., 31, 2017
5TZF
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Structure of the BldD CTD(D116A)-(c-di-GMP)2 intermediate, form 1
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein
Authors:Schumacher, M.A.
Deposit date:2016-11-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
5TZG
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Structure of the BldD CTD(D116A)-(c-di-GMP)2, form 2
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), DNA-binding protein, ZINC ION
Authors:Schumacher, M.A.
Deposit date:2016-11-21
Release date:2017-04-19
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The Streptomyces master regulator BldD binds c-di-GMP sequentially to create a functional BldD2-(c-di-GMP)4 complex.
Nucleic Acids Res., 45, 2017
6CG8
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BU of 6cg8 by Molmil
Structure of C. crescentus GapR-DNA
Descriptor: DNA (5'-D(*TP*TP*AP*AP*AP*AP*TP*TP*AP*AP*A)-3'), DNA (5'-D(*TP*TP*TP*AP*AP*TP*TP*TP*TP*AP*A)-3'), UPF0335 protein B7Z12_12435
Authors:Schumacher, M.A.
Deposit date:2018-02-19
Release date:2018-09-26
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.299 Å)
Cite:A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.
Cell, 175, 2018
6CFX
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BU of 6cfx by Molmil
Bosea sp GapR solved in the presence of DNA
Descriptor: PHOSPHATE ION, UPF0335 protein ASE63_04290
Authors:Schumacher, M.A.
Deposit date:2018-02-18
Release date:2018-09-12
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication.
Cell, 175, 2018
1HAC
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BU of 1hac by Molmil
CROSSLINKED HAEMOGLOBIN
Descriptor: 2,6-DICARBOXYNAPHTHALENE, CARBON MONOXIDE, HEMOGLOBIN A, ...
Authors:Schumacher, M.A, Dixon, M.M, Kluger, R, Jones, R.T, Brennan, R.G.
Deposit date:1996-03-13
Release date:1997-11-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric intermediates indicate R2 is the liganded hemoglobin end state.
Proc.Natl.Acad.Sci.USA, 94, 1997
1HAB
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BU of 1hab by Molmil
CROSSLINKED HAEMOGLOBIN
Descriptor: 4-CARBOXYCINNAMIC ACID, CARBON MONOXIDE, HEMOGLOBIN A, ...
Authors:Schumacher, M.A, Dixon, M.M, Kluger, R, Jones, R.T, Brennan, R.G.
Deposit date:1996-03-13
Release date:1997-11-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Allosteric intermediates indicate R2 is the liganded hemoglobin end state.
Proc.Natl.Acad.Sci.USA, 94, 1997
6DXO
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BU of 6dxo by Molmil
1.8 A structure of RsbN-BldN complex.
Descriptor: BldN, RNA polymerase ECF-subfamily sigma factor
Authors:Schumacher, M.A.
Deposit date:2018-06-29
Release date:2018-07-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of the RsbN-sigma BldN complex from Streptomyces venezuelae defines a new structural class of anti-sigma factor.
Nucleic Acids Res., 46, 2018
6BYJ
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BU of 6byj by Molmil
Structure of human 14-3-3 gamma bound to O-GlcNAc peptide
Descriptor: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, TSTTATPPVSQASSTTTSTW O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018
6BYL
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BU of 6byl by Molmil
Structure of 14-3-3 gamma bound to O-GlcNAcylated thr peptide
Descriptor: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, TSASTTVPVTTATTTTTSTW O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018
6BZD
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BU of 6bzd by Molmil
Structure of 14-3-3 gamma R57E mutant bound to GlcNAcylated peptide
Descriptor: 14-3-3 protein gamma, 2-acetamido-2-deoxy-beta-D-glucopyranose, GlcNAcylated peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-22
Release date:2018-05-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BYK
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BU of 6byk by Molmil
Structure of 14-3-3 beta/alpha bound to O-ClcNAc peptide
Descriptor: 14-3-3 protein beta/alpha, 2-acetamido-2-deoxy-beta-D-glucopyranose, ATPPVSQASSTT O-GlcNac peptide
Authors:Schumacher, M.A.
Deposit date:2017-12-20
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of O-GlcNAc recognition by mammalian 14-3-3 proteins.
Proc.Natl.Acad.Sci.USA, 115, 2018
6E4N
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Structure of the T. brucei TbRGG2 RRM domain: apo R3 crystal form
Descriptor: RNA-binding protein, putative
Authors:Schumacher, M.A.
Deposit date:2018-07-18
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:The RRM of the kRNA-editing protein TbRGG2 uses multiple surfaces to bind and remodel RNA.
Nucleic Acids Res., 47, 2019
6E4O
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BU of 6e4o by Molmil
Structure of apo T. brucei RRM: P4(1)2(1)2 form
Descriptor: RNA-binding protein, putative
Authors:Schumacher, M.A.
Deposit date:2018-07-18
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The RRM of the kRNA-editing protein TbRGG2 uses multiple surfaces to bind and remodel RNA.
Nucleic Acids Res., 47, 2019
6E4P
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BU of 6e4p by Molmil
Structure of the T. brucei RRM domain in complex with RNA
Descriptor: RNA (5'-R(P*UP*UP*UP*U)-3'), RNA-binding protein, putative
Authors:Schumacher, M.A.
Deposit date:2018-07-18
Release date:2018-12-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:The RRM of the kRNA-editing protein TbRGG2 uses multiple surfaces to bind and remodel RNA.
Nucleic Acids Res., 47, 2019
3BTL
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BU of 3btl by Molmil
crystal structure of QacR(E58Q) bound to malachite green
Descriptor: HTH-type transcriptional regulator qacR, MALACHITE GREEN, SULFATE ION
Authors:Schumacher, M.A, Schuman, J.T, Brennan, R.G.
Deposit date:2007-12-28
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:QacR-cation recognition is mediated by a redundancy of residues capable of charge neutralization
Biochemistry, 47, 2008
6U9X
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BU of 6u9x by Molmil
Structure of T. brucei MERS1-RNA complex
Descriptor: Mitochondrial edited mRNA stability factor 1, RNA (5'-R(*GP*AP*GP*AP*GP*GP*GP*GP*GP*UP*U)-3')
Authors:Schumacher, M.A.
Deposit date:2019-09-09
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structures of MERS1, the 5' processing enzyme of mitochondrial mRNAs inTrypanosoma brucei.
Rna, 26, 2020
6UMK
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BU of 6umk by Molmil
Structure of E. coli FtsZ(L178E)-GDP complex
Descriptor: Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Schumacher, M.A.
Deposit date:2019-10-09
Release date:2020-02-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:High-resolution crystal structures of Escherichia coli FtsZ bound to GDP and GTP.
Acta Crystallogr.,Sect.F, 76, 2020
3DNU
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BU of 3dnu by Molmil
structure of MDT protein
Descriptor: CHLORIDE ION, PHOSPHATE ION, Protein hipA
Authors:schumacher, M.A.
Deposit date:2008-07-02
Release date:2009-01-27
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.
Science, 323, 2009

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