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PDB: 629 results

4MZD
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BU of 4mzd by Molmil
High resolution crystal structure of the nisin leader peptidase NisP from Lactococcus lactis
Descriptor: Nisin leader peptide-processing serine protease NisP
Authors:Rao, Z.H, Xu, Y.Y, Li, X, Yang, W.
Deposit date:2013-09-30
Release date:2014-06-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structure of the nisin leader peptidase NisP revealing a C-terminal autocleavage activity.
Acta Crystallogr.,Sect.D, 70, 2014
4RDJ
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BU of 4rdj by Molmil
Crystal structure of Norovirus Boxer P domain
Descriptor: Capsid
Authors:Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
Deposit date:2014-09-19
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
5ZZ3
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BU of 5zz3 by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A3
Descriptor: Butyrophilin, subfamily 3, member A3 isoform b variant
Authors:Yang, Y.Y, Li, X, Liu, W.D, Chen, C.C, Guo, R.T, Zhang, Y.H.
Deposit date:2018-05-30
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated V gamma 9V delta 2 T Cell Activation.
Immunity, 50, 2019
7URF
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BU of 7urf by Molmil
Human HHAT H379C in complex with SHH N-terminal peptide
Descriptor: 3H02 heavy chain, 3H02 light chain, Digitonin, ...
Authors:Liu, Y, Qi, X, Li, X.
Deposit date:2022-04-21
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Mechanisms and inhibition of Porcupine-mediated Wnt acylation.
Nature, 607, 2022
7URE
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BU of 7ure by Molmil
Human PORCN in complex with palmitoleoylated WNT3A peptide
Descriptor: 2C11 heavy chain, 2C11 light chain, Digitonin, ...
Authors:Liu, Y, Qi, X, Li, X.
Deposit date:2022-04-21
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Mechanisms and inhibition of Porcupine-mediated Wnt acylation.
Nature, 607, 2022
7URC
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BU of 7urc by Molmil
Human PORCN in complex with LGK974
Descriptor: 2-[(2P)-2',3-dimethyl[2,4'-bipyridin]-5-yl]-N-[(5P)-5-(pyrazin-2-yl)pyridin-2-yl]acetamide, 2C11 heavy chain, 2C11 light chain, ...
Authors:Liu, Y, Qi, X, Li, X.
Deposit date:2022-04-21
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Mechanisms and inhibition of Porcupine-mediated Wnt acylation.
Nature, 607, 2022
7URA
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BU of 7ura by Molmil
Human PORCN in complex with Palmitoleoyl-CoA
Descriptor: 2C11 heavy chain, 2C11 light chain, CHOLESTEROL, ...
Authors:Liu, Y, Qi, X, Li, X.
Deposit date:2022-04-21
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (3.11 Å)
Cite:Mechanisms and inhibition of Porcupine-mediated Wnt acylation.
Nature, 607, 2022
5AGT
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BU of 5agt by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-4-chloro-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 4-Chloro-3-aminomethyl-7-[ethoxy]-3H-benzo[C][1,2]oxaborol-1-ol modified adenosine, GLYCEROL, LEUCINE--TRNA LIGASE, ...
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
7URD
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BU of 7urd by Molmil
Human PORCN in complex with LGK974 and WNT3A peptide
Descriptor: 2-[(2P)-2',3-dimethyl[2,4'-bipyridin]-5-yl]-N-[(5P)-5-(pyrazin-2-yl)pyridin-2-yl]acetamide, 2C11 heavy chain, 2C11 light chain, ...
Authors:Liu, Y, Qi, X, Li, X.
Deposit date:2022-04-21
Release date:2022-07-20
Last modified:2022-08-10
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Mechanisms and inhibition of Porcupine-mediated Wnt acylation.
Nature, 607, 2022
5AGS
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BU of 5ags by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct 3-(Aminomethyl)-4-bromo-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 3-(AMINOMETHYL)-4-BROMO-7-ETHOXYBENZO[C][1,2]OXABOROL-1(3H)-OL-MODIFIED ADENOSINE, LEUCYL-TRNA SYNTHETASE, METHIONINE
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
5CN1
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BU of 5cn1 by Molmil
Crystal structure of yeast GGA1_GAE domain-P21
Descriptor: ADP-ribosylation factor-binding protein GGA1
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5CN2
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BU of 5cn2 by Molmil
Crystal structure of yeast GGA1_GAE domain-C2221
Descriptor: ADP-ribosylation factor-binding protein GGA1
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for the accessory protein recruitment by yeast GGA1_GAE domain
To Be Published
5CMW
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BU of 5cmw by Molmil
Crystal structure of yeast Ent5 N-terminal domain-soaked in KI
Descriptor: Epsin-5, GLYCEROL, IODIDE ION
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
5CMY
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BU of 5cmy by Molmil
Crystal structure of yeast Ent5 N-terminal domain-native
Descriptor: Epsin-5, GLYCEROL
Authors:Zhang, F, Song, Y, Li, X, Teng, M.K.
Deposit date:2015-07-17
Release date:2016-07-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural and functional insight into the N-terminal domain of the clathrin adaptor Ent5 from Saccharomyces cerevisiae
Biochem.Biophys.Res.Commun., 477, 2016
5AGR
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BU of 5agr by Molmil
Crystal structure of the LeuRS editing domain of Mycobacterium tuberculosis in complex with the adduct (S)-3-(Aminomethyl)-7-ethoxybenzo[c][1,2]oxaborol-1(3H)-ol-AMP
Descriptor: 1,2-ETHANEDIOL, 3-AMINOMETHYL-7-(ETHOXY)-3H-BENZO[C][1,2]OXABOROL-1-OL modified adenosine, LEUCINE, ...
Authors:Palencia, A, Li, X, Alley, M.R.K, Ding, C, Easom, E.E, Hernandez, V, Meewan, M, Mohan, M, Rock, F.L, Franzblau, S.G, Wang, Y, Lenaerts, A.J, Parish, T, Cooper, C.B, Waters, M.G, Ma, Z, Mendoza, A, Barros, D, Cusack, S, Plattner, J.J.
Deposit date:2015-02-03
Release date:2016-03-02
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Discovery of Novel Oral Protein Synthesis Inhibitors of Mycobacterium Tuberculosis that Target Leucyl-tRNA Synthetase.
Antimicrob.Agents Chemother., 60, 2016
3EZR
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BU of 3ezr by Molmil
CDK-2 with indazole inhibitor 17 bound at its active site
Descriptor: 3-methoxy-4-{3-[4-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline, Cell division protein kinase 2
Authors:Kiefer, J.R, Day, J.E, Caspers, N.L, Mathis, K.J, Kretzmer, K.K, Weinberg, R.A, Reitz, B.A, Stegeman, R.A, Trujillo, J.I, Huang, W, Thorarensen, A, Xing, L, Wrightstone, A, Christine, L, Compton, R, Li, X.
Deposit date:2008-10-23
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor
Bioorg.Med.Chem.Lett., 19, 2009
3EZV
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BU of 3ezv by Molmil
CDK-2 with indazole inhibitor 9 bound at its active site
Descriptor: 4-{3-[7-(4-methylpiperazin-1-yl)-1H-benzimidazol-2-yl]-1H-indazol-6-yl}aniline, Cell division protein kinase 2
Authors:Kiefer, J.R, Day, J.E, Caspers, N.L, Mathis, K.J, Kretzmer, K.K, Weinberg, R.A, Reitz, B.A, Stegeman, R.A, Trujillo, J.I, Huang, W, Thorarensen, A, Xing, L, Wrightstone, A, Christine, L, Compton, R, Li, X.
Deposit date:2008-10-23
Release date:2009-02-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:2-(6-Phenyl-1H-indazol-3-yl)-1H-benzo[d]imidazoles: Design and synthesis of a potent and isoform selective PKC-zeta inhibitor
Bioorg.Med.Chem.Lett., 19, 2009
7LUG
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BU of 7lug by Molmil
Crystal structure of the pnRFP B30Y mutant
Descriptor: PHOSPHATE ION, Red Fluorescent pnRFP B30Y mutant
Authors:Huang, M, Ng, H.L, Pang, Y, Zhang, S, Fan, Y, Yeh, H, Xiong, Y, Li, X, Ai, H.
Deposit date:2021-02-22
Release date:2022-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Development, Characterization, and Structural Analysis of a Genetically Encoded Red Fluorescent Peroxynitrite Biosensor
To Be Published
7LQO
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BU of 7lqo by Molmil
Crystal structure of a genetically encoded red fluorescent peroxynitrite biosensor, pnRFP
Descriptor: PHOSPHATE ION, red fluorescent peroxynitrite biosensor pnRFP
Authors:Huang, M, Ng, H.L, Pang, Y, Zhang, S, Fan, Y, Yeh, H, Xiong, Y, Li, X, Ai, H.
Deposit date:2021-02-14
Release date:2022-03-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Development, Characterization, and Structural Analysis of a Genetically Encoded Red Fluorescent Peroxynitrite Biosensor
To Be Published
7MGL
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BU of 7mgl by Molmil
Structure of human TRPML1 with ML-SI3
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Mucolipin-1, N-{(1S,2S)-2-[4-(2-methoxyphenyl)piperazin-1-yl]cyclohexyl}benzenesulfonamide
Authors:Schmiege, P, Li, X.
Deposit date:2021-04-12
Release date:2021-06-16
Last modified:2021-11-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Atomic insights into ML-SI3 mediated human TRPML1 inhibition.
Structure, 29, 2021
2G63
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BU of 2g63 by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 24b
Descriptor: Dipeptidyl peptidase 4, METHYL 4-{[({[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHYL}AMINO)CARBONYL]AMINO}BENZOATE
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-24
Release date:2006-07-04
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
2G5P
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BU of 2g5p by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ac
Descriptor: 4-{[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHOXY}-3-TERT-BUTYLBENZOIC ACID, Dipeptidyl peptidase 4
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-23
Release date:2006-07-04
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
4GO5
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BU of 4go5 by Molmil
The regulatory subunit of aspartate kinase from Mycobacterium tuberculosis
Descriptor: Aspartokinase
Authors:Yang, Q, Li, X.
Deposit date:2012-08-18
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural view of the regulatory subunit of aspartate kinase from Mycobacterium tuberculosis.
Protein Cell, 2, 2011
2G5T
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BU of 2g5t by Molmil
Crystal structure of human dipeptidyl peptidase IV (DPPIV) complexed with cyanopyrrolidine (C5-pro-pro) inhibitor 21ag
Descriptor: 3-{[(2R,5S)-5-{[(2S)-2-(AMINOMETHYL)PYRROLIDIN-1-YL]CARBONYL}PYRROLIDIN-2-YL]METHOXY}-4-CHLOROBENZOIC ACID, Dipeptidyl peptidase 4
Authors:Longenecker, K.L, Fry, E.H, Lake, M.R, Solomon, L.R, Pei, Z, Li, X.
Deposit date:2006-02-23
Release date:2006-07-04
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery, structure-activity relationship, and pharmacological evaluation of (5-substituted-pyrrolidinyl-2-carbonyl)-2-cyanopyrrolidines as potent dipeptidyl peptidase IV inhibitors.
J.Med.Chem., 49, 2006
4GO7
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BU of 4go7 by Molmil
The regulatory subunit of aspartate kinase in complex with threonine from Mycobacterium tuberculosis
Descriptor: Aspartokinase, THREONINE
Authors:Yang, Q, Li, X.
Deposit date:2012-08-19
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural view of the regulatory subunit of aspartate kinase from Mycobacterium tuberculosis.
Protein Cell, 2, 2011

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